RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, human

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCARB2-223	ENST00000640640	BCL6B	Q8N143	479 aa	Predicted RBP	13.84	□□□□□ -0.19
SCARB2-223	ENST00000640640	IGKV1OR2-108	A0A075B7D4	117 aa		13.83	□□□□□ -0.19
SCARB2-223	ENST00000640640	HLA-DMB	P28068	263 aa		13.83	□□□□□ -0.2
SCARB2-223	ENST00000640640	PYGO2	Q9BRQ0	406 aa		13.83	□□□□□ -0.2
SCARB2-223	ENST00000640640	RPL35A	P18077	110 aa	Known RBP	13.83	□□□□□ -0.2
SCARB2-223	ENST00000640640	TCTEX1D4	Q5JR98	221 aa		13.83	□□□□□ -0.2
SCARB2-223	ENST00000640640	NPB	Q8NG41	125 aa		13.83	□□□□□ -0.2
SCARB2-223	ENST00000640640	IGHV3-53	P01767	116 aa		13.82	□□□□□ -0.2
SCARB2-223	ENST00000640640	RNASE1	P07998	156 aa	Known RBP	13.82	□□□□□ -0.2
SCARB2-223	ENST00000640640		E7EUB6	86 aa		13.82	□□□□□ -0.2
SCARB2-223	ENST00000640640	CGB3	P0DN86	165 aa		13.82	□□□□□ -0.2
SCARB2-223	ENST00000640640	CGB7	P0DN87	165 aa		13.82	□□□□□ -0.2
SCARB2-223	ENST00000640640	STPG4	Q8N801	248 aa		13.82	□□□□□ -0.2
SCARB2-223	ENST00000640640	HOXA3	O43365	443 aa	Predicted RBP	13.81	□□□□□ -0.2
SCARB2-223	ENST00000640640	IGHV4-39	P01824	125 aa		13.81	□□□□□ -0.2
SCARB2-223	ENST00000640640	C1QTNF4	Q9BXJ3	329 aa		13.81	□□□□□ -0.2
SCARB2-223	ENST00000640640	C22orf34	Q6ZV56	151 aa		13.81	□□□□□ -0.2
SCARB2-223	ENST00000640640	ZNF479	Q96JC4	524 aa		13.81	□□□□□ -0.2
SCARB2-223	ENST00000640640	IGLV11-55	A0A075B6I3	123 aa		13.81	□□□□□ -0.2
SCARB2-223	ENST00000640640		A0A0U1RRA0	63 aa		13.81	□□□□□ -0.2
SCARB2-223	ENST00000640640	ADARB2-AS1	A8MUL3	147 aa		13.81	□□□□□ -0.2
SCARB2-223	ENST00000640640	GP9	P14770	177 aa		13.81	□□□□□ -0.2
SCARB2-223	ENST00000640640	ANXA2R	Q3ZCQ2	193 aa		13.81	□□□□□ -0.2
SCARB2-223	ENST00000640640	LINC01619	G3V211	115 aa		13.8	□□□□□ -0.2
SCARB2-223	ENST00000640640		P0C879	139 aa		13.8	□□□□□ -0.2
SCARB2-223	ENST00000640640	NAA38	Q9BRA0	125 aa	Known RBP	13.8	□□□□□ -0.2
SCARB2-223	ENST00000640640	IGHV7-4-1	A0A0J9YVY3	117 aa		13.8	□□□□□ -0.2
SCARB2-223	ENST00000640640	TEX43	Q6ZNM6	134 aa		13.8	□□□□□ -0.2
SCARB2-223	ENST00000640640	IGLV2-23	P01705	113 aa		13.8	□□□□□ -0.2
SCARB2-223	ENST00000640640	DEFB112	Q30KQ8	113 aa		13.8	□□□□□ -0.2
SCARB2-223	ENST00000640640	IGHV4-59	P01825	116 aa		13.79	□□□□□ -0.2
SCARB2-223	ENST00000640640	FAM167A-AS1	Q96KT0	104 aa		13.79	□□□□□ -0.2
SCARB2-223	ENST00000640640	IGHV4-30-2	A0A087WSY4	118 aa		13.79	□□□□□ -0.2
SCARB2-223	ENST00000640640	BRWD1-AS2	P59051	145 aa		13.79	□□□□□ -0.2
SCARB2-223	ENST00000640640	AGPAT4-IT1	Q9H0P7	198 aa		13.79	□□□□□ -0.2
SCARB2-223	ENST00000640640	XCL2	Q9UBD3	114 aa		13.79	□□□□□ -0.2
SCARB2-223	ENST00000640640	KNCN	A6PVL3	124 aa		13.79	□□□□□ -0.2
SCARB2-223	ENST00000640640	ELANE	P08246	267 aa		13.79	□□□□□ -0.2
SCARB2-223	ENST00000640640	DYNAP	Q8N1N2	210 aa		13.79	□□□□□ -0.2
SCARB2-223	ENST00000640640	KLK9	Q9UKQ9	250 aa		13.79	□□□□□ -0.2
SCARB2-223	ENST00000640640	IGHV1-24	A0A0C4DH33	117 aa		13.79	□□□□□ -0.2
SCARB2-223	ENST00000640640	INS-IGF2	F8WCM5	200 aa		13.79	□□□□□ -0.2
SCARB2-223	ENST00000640640		H3BUA1	57 aa		13.79	□□□□□ -0.2
SCARB2-223	ENST00000640640	PRADC1	Q9BSG0	188 aa		13.79	□□□□□ -0.2
SCARB2-223	ENST00000640640	CDKN1B	P46527	198 aa		13.78	□□□□□ -0.2
SCARB2-223	ENST00000640640	C2orf66	Q6UXQ4	117 aa		13.78	□□□□□ -0.2
SCARB2-223	ENST00000640640	NUP210L	Q5VU65	1888 aa		13.78	□□□□□ -0.2
SCARB2-223	ENST00000640640	CTSG	P08311	255 aa		13.78	□□□□□ -0.2
SCARB2-223	ENST00000640640	CFAP161	Q6P656	301 aa		13.78	□□□□□ -0.2
SCARB2-223	ENST00000640640	DTX2	Q86UW9	622 aa		13.78	□□□□□ -0.2
SCARB2-223	ENST00000640640		Q8N7P7	452 aa		13.78	□□□□□ -0.2
SCARB2-223	ENST00000640640		Q8N9W7	124 aa		13.78	□□□□□ -0.2
SCARB2-223	ENST00000640640	MRPL36	Q9P0J6	103 aa	Known RBP	13.78	□□□□□ -0.2
SCARB2-223	ENST00000640640	EREG	O14944	169 aa		13.78	□□□□□ -0.2
SCARB2-223	ENST00000640640	RIPPLY3	P57055	190 aa		13.78	□□□□□ -0.2
SCARB2-223	ENST00000640640	TRAV12-2	A0A075B6T6	113 aa		13.78	□□□□□ -0.2
SCARB2-223	ENST00000640640	SAMD5	Q5TGI4	173 aa		13.78	□□□□□ -0.2
SCARB2-223	ENST00000640640		Q8N8P6	123 aa		13.78	□□□□□ -0.2
SCARB2-223	ENST00000640640	SIGLEC8	Q9NYZ4	499 aa		13.78	□□□□□ -0.2
SCARB2-223	ENST00000640640	TRBV7-9	A0A0J9YWB2	115 aa		13.77	□□□□□ -0.2
SCARB2-223	ENST00000640640	IGHV4-38-2	P0DP08	117 aa		13.77	□□□□□ -0.2
SCARB2-223	ENST00000640640	NACA	E9PAV3	2078 aa		13.77	□□□□□ -0.2
SCARB2-223	ENST00000640640	IGHV1OR15-1	A0A075B7D0	117 aa		13.77	□□□□□ -0.21
SCARB2-223	ENST00000640640	DLEU1	O43261	78 aa		13.77	□□□□□ -0.21
SCARB2-223	ENST00000640640	NPY	P01303	97 aa		13.77	□□□□□ -0.21
SCARB2-223	ENST00000640640	TEX22	C9J3V5	150 aa		13.77	□□□□□ -0.21
SCARB2-223	ENST00000640640	TRPT1	Q86TN4	253 aa	Known RBP	13.77	□□□□□ -0.21
SCARB2-223	ENST00000640640	PHLDA1	Q8WV24	401 aa	Predicted RBP	13.76	□□□□□ -0.21
SCARB2-223	ENST00000640640	C1orf159	Q96HA4	380 aa		13.76	□□□□□ -0.21
SCARB2-223	ENST00000640640	IGLC2	P0DOY2	106 aa		13.76	□□□□□ -0.21
SCARB2-223	ENST00000640640	IGLC3	P0DOY3	106 aa		13.76	□□□□□ -0.21
SCARB2-223	ENST00000640640	EGR2	P11161	476 aa	Predicted RBP	13.76	□□□□□ -0.21
SCARB2-223	ENST00000640640	ZFP36	P26651	326 aa	Known RBP	13.76	□□□□□ -0.21
SCARB2-223	ENST00000640640	BLCAP	P62952	87 aa		13.76	□□□□□ -0.21
SCARB2-223	ENST00000640640	COA6	Q5JTJ3	125 aa	Known RBP	13.76	□□□□□ -0.21
SCARB2-223	ENST00000640640	UTF1	Q5T230	341 aa		13.76	□□□□□ -0.21
SCARB2-223	ENST00000640640	OR5A1	Q8NGJ0	315 aa		13.76	□□□□□ -0.21
SCARB2-223	ENST00000640640	TRAV26-2	A0A0B4J265	109 aa		13.76	□□□□□ -0.21
SCARB2-223	ENST00000640640	PCP4	P48539	62 aa		13.76	□□□□□ -0.21
SCARB2-223	ENST00000640640	MRPL52	Q86TS9	123 aa	Known RBP	13.76	□□□□□ -0.21
SCARB2-223	ENST00000640640	PLEKHB2	Q96CS7	222 aa		13.76	□□□□□ -0.21
SCARB2-223	ENST00000640640	RNF114	Q9Y508	228 aa		13.76	□□□□□ -0.21
SCARB2-223	ENST00000640640	TMEM238	C9JI98	176 aa		13.76	□□□□□ -0.21
SCARB2-223	ENST00000640640	TLN2	Q9Y4G6	2542 aa		13.75	□□□□□ -0.21
SCARB2-223	ENST00000640640		F6UB75	175 aa		13.75	□□□□□ -0.21
SCARB2-223	ENST00000640640	DSCAM	O60469	2012 aa		13.75	□□□□□ -0.21
SCARB2-223	ENST00000640640		A0A087WX48	190 aa		13.75	□□□□□ -0.21
SCARB2-223	ENST00000640640	MAL	P21145	153 aa		13.75	□□□□□ -0.21
SCARB2-223	ENST00000640640	WIPF2	Q8TF74	440 aa	Predicted RBP	13.75	□□□□□ -0.21
SCARB2-223	ENST00000640640	VPREB3	Q9UKI3	123 aa		13.75	□□□□□ -0.21
SCARB2-223	ENST00000640640	C10orf105	Q8TEF2	133 aa		13.75	□□□□□ -0.21
SCARB2-223	ENST00000640640	TP53TG1	Q9Y2A0	90 aa		13.75	□□□□□ -0.21
SCARB2-223	ENST00000640640	SDHAF1	A6NFY7	115 aa		13.74	□□□□□ -0.21
SCARB2-223	ENST00000640640	RHOD	O00212	210 aa		13.74	□□□□□ -0.21
SCARB2-223	ENST00000640640	MEGF9	Q9H1U4	602 aa		13.74	□□□□□ -0.21
SCARB2-223	ENST00000640640	LINC00574	Q9H8X3	128 aa		13.74	□□□□□ -0.21
SCARB2-223	ENST00000640640		J3QKU1	62 aa		13.74	□□□□□ -0.21
SCARB2-223	ENST00000640640	DAZAP2	Q15038	168 aa	Predicted RBP	13.74	□□□□□ -0.21
SCARB2-223	ENST00000640640	IGLL1	P15814	213 aa		13.74	□□□□□ -0.21
SCARB2-223	ENST00000640640	TMEM95	Q3KNT9	176 aa		13.74	□□□□□ -0.21

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