RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 PRR20EP86478 221 aa8.69□□□□□ -1.02
SCN1B-208ENST00000640135 PRR20CP86479 221 aa8.69□□□□□ -1.02
SCN1B-208ENST00000640135 PRR20DP86480 221 aa8.69□□□□□ -1.02
SCN1B-208ENST00000640135 PRR20BP86481 221 aa8.69□□□□□ -1.02
SCN1B-208ENST00000640135 PRR20AP86496 221 aa8.69□□□□□ -1.02
SCN1B-208ENST00000640135 K7EMT4 169 aa8.68□□□□□ -1.02
SCN1B-208ENST00000640135 TNFRSF6BO95407 300 aa8.68□□□□□ -1.02
SCN1B-208ENST00000640135 SH2D6Q7Z4S9 175 aa8.68□□□□□ -1.02
SCN1B-208ENST00000640135 IGLV1-47P01700 117 aa8.68□□□□□ -1.02
SCN1B-208ENST00000640135 RHOHQ15669 191 aa8.68□□□□□ -1.02
SCN1B-208ENST00000640135 ANXA2RQ3ZCQ2 193 aa8.68□□□□□ -1.02
SCN1B-208ENST00000640135 C5orf56Q8N8D9 126 aa8.68□□□□□ -1.02
SCN1B-208ENST00000640135 KLK9Q9UKQ9 250 aa8.68□□□□□ -1.02
SCN1B-208ENST00000640135 GUSBP1Q15486 140 aa8.68□□□□□ -1.02
SCN1B-208ENST00000640135 VWC2Q2TAL6 325 aa8.68□□□□□ -1.02
SCN1B-208ENST00000640135 LOC102724200A0A096LPH7 203 aaPredicted RBP8.68□□□□□ -1.02
SCN1B-208ENST00000640135 M0R2P5 195 aa8.68□□□□□ -1.02
SCN1B-208ENST00000640135 FAM104BQ5XKR9 115 aa8.68□□□□□ -1.02
SCN1B-208ENST00000640135 Q8N9W7 124 aa8.68□□□□□ -1.02
SCN1B-208ENST00000640135 GGTLC3B5MD39 225 aa8.67□□□□□ -1.02
SCN1B-208ENST00000640135 TNFRSF13BO14836 293 aaPredicted RBP8.67□□□□□ -1.02
SCN1B-208ENST00000640135 PAX2Q02962 417 aa8.67□□□□□ -1.02
SCN1B-208ENST00000640135 LINC00479Q96M42 142 aa8.67□□□□□ -1.02
SCN1B-208ENST00000640135 OVOL2Q9BRP0 275 aa8.67□□□□□ -1.02
SCN1B-208ENST00000640135 IGLV11-55A0A075B6I3 123 aa8.67□□□□□ -1.02
SCN1B-208ENST00000640135 IGHG2P01859 326 aa8.67□□□□□ -1.02
SCN1B-208ENST00000640135 HIST3H2BBQ8N257 126 aa8.67□□□□□ -1.02
SCN1B-208ENST00000640135 SIRPDQ9H106 197 aa8.67□□□□□ -1.02
SCN1B-208ENST00000640135 BLCAPP62952 87 aa8.67□□□□□ -1.02
SCN1B-208ENST00000640135 HSD52Q0P140 79 aa8.67□□□□□ -1.02
SCN1B-208ENST00000640135 FGF23Q9GZV9 251 aaPredicted RBP8.67□□□□□ -1.02
SCN1B-208ENST00000640135 KIF26AQ9ULI4 1882 aaPredicted RBP8.67□□□□□ -1.02
SCN1B-208ENST00000640135 SNAI2O43623 268 aa8.66□□□□□ -1.02
SCN1B-208ENST00000640135 ANKRD39Q53RE8 183 aa8.66□□□□□ -1.02
SCN1B-208ENST00000640135 C11orf52Q96A22 123 aa8.66□□□□□ -1.02
SCN1B-208ENST00000640135 TIMM21Q9BVV7 248 aa8.66□□□□□ -1.02
SCN1B-208ENST00000640135 PRIMA1Q86XR5 153 aa8.66□□□□□ -1.02
SCN1B-208ENST00000640135 WIPF2Q8TF74 440 aaPredicted RBP8.66□□□□□ -1.02
SCN1B-208ENST00000640135 NRGNQ92686 78 aa8.66□□□□□ -1.02
SCN1B-208ENST00000640135 SHANK1Q9Y566 2161 aa8.66□□□□□ -1.02
SCN1B-208ENST00000640135 INS-IGF2F8WCM5 200 aa8.66□□□□□ -1.02
SCN1B-208ENST00000640135 SPRNQ5BIV9 151 aa8.66□□□□□ -1.02
SCN1B-208ENST00000640135 FNDC4Q9H6D8 234 aaPredicted RBP8.66□□□□□ -1.02
SCN1B-208ENST00000640135 ERG28Q9UKR5 140 aa8.66□□□□□ -1.02
SCN1B-208ENST00000640135 MED13Q9UHV7 2174 aa8.66□□□□□ -1.02
SCN1B-208ENST00000640135 GPHB5Q86YW7 130 aa8.65□□□□□ -1.02
SCN1B-208ENST00000640135 ZNF843Q8N446 348 aa8.65□□□□□ -1.02
SCN1B-208ENST00000640135 ZNRF2Q8NHG8 242 aa8.65□□□□□ -1.02
SCN1B-208ENST00000640135 FXYD5Q96DB9 178 aa8.65□□□□□ -1.02
SCN1B-208ENST00000640135 AJUBAQ96IF1 538 aa8.65□□□□□ -1.02
SCN1B-208ENST00000640135 ALPK3Q96L96 1907 aa8.65□□□□□ -1.02
SCN1B-208ENST00000640135 SDHAF1A6NFY7 115 aa8.65□□□□□ -1.02
SCN1B-208ENST00000640135 F8WEM9 126 aa8.65□□□□□ -1.02
SCN1B-208ENST00000640135 PRB4P10163 310 aaPredicted RBP8.65□□□□□ -1.02
SCN1B-208ENST00000640135 Q8N8P6 123 aa8.65□□□□□ -1.02
SCN1B-208ENST00000640135 DENND4CQ5VZ89 1909 aa8.65□□□□□ -1.02
SCN1B-208ENST00000640135 A8MWP6 167 aa8.65□□□□□ -1.02
SCN1B-208ENST00000640135 LEPROTO15243 131 aa8.65□□□□□ -1.02
SCN1B-208ENST00000640135 ZFP36P26651 326 aaKnown RBP8.65□□□□□ -1.02
SCN1B-208ENST00000640135 SPART-AS1P0CW21 52 aa8.65□□□□□ -1.03
SCN1B-208ENST00000640135 NHP2Q9NX24 153 aaKnown RBP8.65□□□□□ -1.03
SCN1B-208ENST00000640135 NCOR2Q9Y618 2525 aa8.64□□□□□ -1.03
SCN1B-208ENST00000640135 TRAV12-2A0A075B6T6 113 aa8.64□□□□□ -1.03
SCN1B-208ENST00000640135 A0A1B0GWB2 263 aa8.64□□□□□ -1.03
SCN1B-208ENST00000640135 CRYGCP07315 174 aa8.64□□□□□ -1.03
SCN1B-208ENST00000640135 CFHR3Q02985 330 aa8.64□□□□□ -1.03
SCN1B-208ENST00000640135 C8orf49Q96NF6 230 aa8.64□□□□□ -1.03
SCN1B-208ENST00000640135 I3L2K1 104 aa8.64□□□□□ -1.03
SCN1B-208ENST00000640135 CXCL1P09341 107 aa8.64□□□□□ -1.03
SCN1B-208ENST00000640135 Q8N7P7 452 aa8.64□□□□□ -1.03
SCN1B-208ENST00000640135 ORAOV1Q8WV07 137 aa8.64□□□□□ -1.03
SCN1B-208ENST00000640135 A0A0U1RRA0 63 aa8.64□□□□□ -1.03
SCN1B-208ENST00000640135 NEGR1Q7Z3B1 354 aa8.64□□□□□ -1.03
SCN1B-208ENST00000640135 IL17DQ8TAD2 202 aa8.64□□□□□ -1.03
SCN1B-208ENST00000640135 PIFOQ8TCI5 191 aa8.64□□□□□ -1.03
SCN1B-208ENST00000640135 SPCS1Q9Y6A9 102 aa8.64□□□□□ -1.03
SCN1B-208ENST00000640135 ATXN8Q156A1 80 aa8.64□□□□□ -1.03
SCN1B-208ENST00000640135 C2orf66Q6UXQ4 117 aa8.64□□□□□ -1.03
SCN1B-208ENST00000640135 C20orf78Q9BR46 151 aa8.64□□□□□ -1.03
SCN1B-208ENST00000640135 IGHV3-64A0A075B6Q5 118 aa8.63□□□□□ -1.03
SCN1B-208ENST00000640135 K7EIM0 57 aa8.63□□□□□ -1.03
SCN1B-208ENST00000640135 CD5LO43866 347 aa8.63□□□□□ -1.03
SCN1B-208ENST00000640135 LMO4P61968 165 aa8.63□□□□□ -1.03
SCN1B-208ENST00000640135 C4orf3Q8WVX3 66 aa8.63□□□□□ -1.03
SCN1B-208ENST00000640135 C16orf74Q96GX8 76 aa8.63□□□□□ -1.03
SCN1B-208ENST00000640135 CSPG4Q6UVK1 2322 aa8.63□□□□□ -1.03
SCN1B-208ENST00000640135 SLURP1P55000 103 aa8.63□□□□□ -1.03
SCN1B-208ENST00000640135 TMEM95Q3KNT9 176 aa8.63□□□□□ -1.03
SCN1B-208ENST00000640135 PTPN13Q12923 2485 aa8.63□□□□□ -1.03
SCN1B-208ENST00000640135 UTRNP46939 3433 aa8.63□□□□□ -1.03
SCN1B-208ENST00000640135 HIST1H2BLQ99880 126 aa8.63□□□□□ -1.03
SCN1B-208ENST00000640135 IGHV1-24A0A0C4DH33 117 aa8.63□□□□□ -1.03
SCN1B-208ENST00000640135 A6NDX4 124 aa8.63□□□□□ -1.03
SCN1B-208ENST00000640135 BCL6BQ8N143 479 aaPredicted RBP8.63□□□□□ -1.03
SCN1B-208ENST00000640135 TP53TG1Q9Y2A0 90 aa8.63□□□□□ -1.03
SCN1B-208ENST00000640135 IGHV3-16A0A0C4DH30 117 aa8.62□□□□□ -1.03
SCN1B-208ENST00000640135 K7EMI3 77 aa8.62□□□□□ -1.03
SCN1B-208ENST00000640135 Q0VG73 95 aa8.62□□□□□ -1.03
SCN1B-208ENST00000640135 DEFB136Q30KP8 78 aa8.62□□□□□ -1.03
SCN1B-208ENST00000640135 WIPF3A6NGB9 483 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms