RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 UBE2NLQ5JXB2 153 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 AADACL4Q5VUY2 407 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 LGALS9CQ6DKI2 356 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 LAIR2Q6ISS4 152 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 SSX8Q7RTT4 187 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 ARPINQ7Z6K5 226 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 DPPA2Q7Z7J5 298 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 Q8N402 240 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 NATD1Q8N6N6 113 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 TMEM75Q8N9X5 138 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 BPIFB6Q8NFQ5 453 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 OR5C1Q8NGR4 320 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 ZNRF2Q8NHG8 242 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 LHFPL5Q8TAF8 219 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 Q8TAT8 98 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 SCGB1C1Q8TD33 95 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 ZCCHC13Q8WW36 166 aaKnown RBP0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 CYGBQ8WWM9 190 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 SLC35B4Q969S0 331 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 TMEM203Q969S6 136 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 TMEM106AQ96A25 262 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 C12orf43Q96C57 262 aaKnown RBP0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 SMIM19Q96E16 107 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 MALSU1Q96EH3 234 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 PYURFQ96I23 114 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 PGLYRP3Q96LB9 341 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 MYCBPQ99417 103 aaPredicted RBP0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 RETNLBQ9BQ08 111 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 AGMATQ9BSE5 352 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 DCUN1D5Q9BTE7 237 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 FAAP24Q9BTP7 215 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 PBDC1Q9BVG4 233 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 MND1Q9BWT6 205 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 PECRQ9BY49 303 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 MROQ9BYG7 248 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 NDEL1Q9GZM8 345 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 LPAR5Q9H1C0 372 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 C11orf68Q9H3H3 251 aaKnown RBP0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 SND1-IT1Q9HBX3 110 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 SDHAF2Q9NX18 166 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 BABAM2Q9NXR7 383 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 IL20Q9NYY1 176 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 PEF1Q9UBV8 284 aaKnown RBP0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 PRO0628Q9UI54 55 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 ZNF257Q9Y2Q1 563 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 FAM32AQ9Y421 112 aaKnown RBP0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 LINC00588Q9Y4M8 146 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 ZNF706Q9Y5V0 76 aaPredicted RBP0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 MUC17Q685J3 4493 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 IGKV1OR2-108A0A075B7D4 117 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 A0A087WTM6 91 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 IGKV2-40A0A087WW87 121 aaPredicted RBP0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 IGHV3-73A0A0B4J1V6 119 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 TRAV25A0A0B4J276 109 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 FAM240AA0A1B0GVK7 77 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 SERTM2A0A1B0GWG4 89 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 TCRBV3S1A0A5B6 114 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 DAPL1A0PJW8 107 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 ERICH4A6NGS2 130 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 OR5H14A6NHG9 310 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 METTL15A6NJ78 407 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 TMEM14DPA8MWL7 114 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 MCRIP1C9JLW8 97 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 M0QZK8 103 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 M0R3E3 92 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 SLC22A1O15245 554 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 TCAPO15273 167 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 FABP7O15540 132 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 CRXO43186 299 aaPredicted RBP0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 NDUFA2O43678 99 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 ZNF73O43830 326 aaPredicted RBP0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 GNG7O60262 68 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 PDCD6O75340 191 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 DCTN3O75935 186 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 CDS2O95674 445 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 MT-CO2P00403 227 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 IFNA10P01566 189 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 IGKV1-5P01602 117 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 IGKV2D-40P01614 121 aaPredicted RBP0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 RBP4P02753 201 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 RLN2P04090 185 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 P0DMU3 169 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 FAM231AP0DMU4 169 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 FAM231CP0DMU5 169 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 OR13C7P0DN81 318 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 ANXA8P13928 327 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 GTF2F2P13984 249 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 CD36P16671 472 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 GALP22466 123 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 CBLN1P23435 193 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 PSMB6P28072 239 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 ERP29P30040 261 aaKnown RBP0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 HSPA13P48723 471 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 PSMD7P51665 324 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 AKR1C2P52895 323 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 AP2S1P53680 142 aaPredicted RBP0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 AQP4P55087 323 aa0.45□□□□□ -2.34
SMARCB1-209ENST00000635578 NAA20P61599 178 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 193.7 ms