RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 BUB3O43684 328 aa15.07■□□□□ 0
PDLIM3-212ENST00000620787 IGHV7-4-1A0A0J9YVY3 117 aa15.06■□□□□ 0
PDLIM3-212ENST00000620787 E9PLD3 99 aa15.06■□□□□ 0
PDLIM3-212ENST00000620787 EBI3Q14213 229 aa15.06■□□□□ 0
PDLIM3-212ENST00000620787 VMO1Q7Z5L0 202 aa15.06■□□□□ 0
PDLIM3-212ENST00000620787 AGPAT4-IT1Q9H0P7 198 aa15.06■□□□□ 0
PDLIM3-212ENST00000620787 TRAV26-2A0A0B4J265 109 aa15.06■□□□□ 0
PDLIM3-212ENST00000620787 LAGE3Q14657 143 aa15.06■□□□□ 0
PDLIM3-212ENST00000620787 CCDC144NLQ6NUI1 221 aa15.06■□□□□ 0
PDLIM3-212ENST00000620787 ZNF502Q8TBZ5 544 aa15.06■□□□□ 0
PDLIM3-212ENST00000620787 AGRNO00468 2067 aa15.06■□□□□ 0
PDLIM3-212ENST00000620787 IGLL5B9A064 214 aa15.05■□□□□ -0
PDLIM3-212ENST00000620787 MYOZ3Q8TDC0 251 aa15.05■□□□□ -0
PDLIM3-212ENST00000620787 SLC50A1Q9BRV3 221 aa15.05■□□□□ -0
PDLIM3-212ENST00000620787 A0A087WX48 190 aa15.04■□□□□ -0
PDLIM3-212ENST00000620787 TMEM11P17152 192 aa15.04■□□□□ -0
PDLIM3-212ENST00000620787 GRNP28799 593 aaKnown RBP15.04■□□□□ -0
PDLIM3-212ENST00000620787 C15orf32Q32M92 178 aa15.04■□□□□ -0
PDLIM3-212ENST00000620787 ZNF292O60281 2723 aa15.04■□□□□ -0
PDLIM3-212ENST00000620787 IGHV3-66A0A0C4DH42 116 aa15.04■□□□□ -0
PDLIM3-212ENST00000620787 CLPSL1A2RUU4 121 aa15.04■□□□□ -0
PDLIM3-212ENST00000620787 RAB9AP51151 201 aa15.04■□□□□ -0
PDLIM3-212ENST00000620787 TAL2Q16559 108 aa15.04■□□□□ -0
PDLIM3-212ENST00000620787 Q8N9W7 124 aa15.03■□□□□ -0
PDLIM3-212ENST00000620787 GVINP1Q7Z2Y8 2422 aa15.03■□□□□ -0
PDLIM3-212ENST00000620787 TRAV8-2A0A0B4J237 113 aa15.03■□□□□ -0
PDLIM3-212ENST00000620787 TIMD4Q96H15 378 aa15.03■□□□□ -0
PDLIM3-212ENST00000620787 VKORC1Q9BQB6 163 aa15.03■□□□□ -0
PDLIM3-212ENST00000620787 UFC1Q9Y3C8 167 aa15.03■□□□□ -0
PDLIM3-212ENST00000620787 OOSP1A8MZH6 123 aa15.02■□□□□ -0
PDLIM3-212ENST00000620787 FOXI2Q6ZQN5 318 aa15.02■□□□□ -0
PDLIM3-212ENST00000620787 FAM110DQ8TAY7 271 aaPredicted RBP15.02■□□□□ -0
PDLIM3-212ENST00000620787 ABCA4P78363 2273 aa15.02□□□□□ -0.01
PDLIM3-212ENST00000620787 WNK2Q9Y3S1 2297 aa15.02□□□□□ -0.01
PDLIM3-212ENST00000620787 CLEC3BP05452 202 aa15.02□□□□□ -0.01
PDLIM3-212ENST00000620787 EFNA4P52798 201 aa15.02□□□□□ -0.01
PDLIM3-212ENST00000620787 C12orf74Q32Q52 190 aa15.02□□□□□ -0.01
PDLIM3-212ENST00000620787 Q6ZQT7 251 aa15.02□□□□□ -0.01
PDLIM3-212ENST00000620787 MSRB2Q9Y3D2 182 aa15.02□□□□□ -0.01
PDLIM3-212ENST00000620787 ZNF479Q96JC4 524 aa15.01□□□□□ -0.01
PDLIM3-212ENST00000620787 IGHV4-4A0A075B6R2 117 aa15□□□□□ -0.01
PDLIM3-212ENST00000620787 IGHV3OR16-13A0A075B7E8 117 aa15□□□□□ -0.01
PDLIM3-212ENST00000620787 IGHV3-74A0A0B4J1X5 117 aa15□□□□□ -0.01
PDLIM3-212ENST00000620787 PLNP26678 52 aa15□□□□□ -0.01
PDLIM3-212ENST00000620787 WFDC2Q14508 124 aa15□□□□□ -0.01
PDLIM3-212ENST00000620787 TMEM78Q5T7P6 136 aa15□□□□□ -0.01
PDLIM3-212ENST00000620787 SPANXB1Q9NS25 103 aaPredicted RBP15□□□□□ -0.01
PDLIM3-212ENST00000620787 ANKHD1Q8IWZ3 2542 aaKnown RBP15□□□□□ -0.01
PDLIM3-212ENST00000620787 FAM90A27PA6NNH2 459 aa15□□□□□ -0.01
PDLIM3-212ENST00000620787 F8W1H4 67 aa14.99□□□□□ -0.01
PDLIM3-212ENST00000620787 GOSR1O95249 250 aa14.99□□□□□ -0.01
PDLIM3-212ENST00000620787 ECSCRQ19T08 205 aa14.99□□□□□ -0.01
PDLIM3-212ENST00000620787 KLK9Q2XQG4 91 aa14.99□□□□□ -0.01
PDLIM3-212ENST00000620787 MINOS1Q5TGZ0 78 aa14.99□□□□□ -0.01
PDLIM3-212ENST00000620787 SAMD13Q5VXD3 122 aa14.99□□□□□ -0.01
PDLIM3-212ENST00000620787 CCDC140Q96MF4 163 aa14.99□□□□□ -0.01
PDLIM3-212ENST00000620787 KLK9Q9UKQ9 250 aa14.99□□□□□ -0.01
PDLIM3-212ENST00000620787 MINOS1-NBL1R4GNA1 71 aa14.99□□□□□ -0.01
PDLIM3-212ENST00000620787 TRBV7-3A0A075B6L6 115 aa14.99□□□□□ -0.01
PDLIM3-212ENST00000620787 C1orf122Q6ZSJ8 110 aa14.98□□□□□ -0.01
PDLIM3-212ENST00000620787 MRPL53Q96EL3 112 aaKnown RBP14.98□□□□□ -0.01
PDLIM3-212ENST00000620787 SPANXN1Q5VSR9 72 aa14.98□□□□□ -0.01
PDLIM3-212ENST00000620787 C9orf47Q6ZRZ4 202 aa14.98□□□□□ -0.01
PDLIM3-212ENST00000620787 HIST1H4GQ99525 98 aa14.98□□□□□ -0.01
PDLIM3-212ENST00000620787 TRAV12-1A0A0B4J245 112 aa14.97□□□□□ -0.01
PDLIM3-212ENST00000620787 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.97□□□□□ -0.01
PDLIM3-212ENST00000620787 C8orf86Q6ZUL3 223 aa14.97□□□□□ -0.01
PDLIM3-212ENST00000620787 IGHV3-49A0A0A0MS15 119 aa14.97□□□□□ -0.01
PDLIM3-212ENST00000620787 H3BMG7 143 aa14.97□□□□□ -0.01
PDLIM3-212ENST00000620787 ATP6V0E1O15342 81 aa14.97□□□□□ -0.01
PDLIM3-212ENST00000620787 CLEC19AQ6UXS0 136 aa14.97□□□□□ -0.01
PDLIM3-212ENST00000620787 SMIM2Q9BVW6 85 aa14.97□□□□□ -0.01
PDLIM3-212ENST00000620787 F8VRH5 84 aa14.96□□□□□ -0.01
PDLIM3-212ENST00000620787 H3BVH4 76 aa14.96□□□□□ -0.01
PDLIM3-212ENST00000620787 H7C1H1 209 aa14.96□□□□□ -0.01
PDLIM3-212ENST00000620787 MRAP2Q96G30 205 aa14.96□□□□□ -0.01
PDLIM3-212ENST00000620787 HIF1ANQ9NWT6 349 aa14.96□□□□□ -0.01
PDLIM3-212ENST00000620787 LINC01619G3V211 115 aa14.96□□□□□ -0.02
PDLIM3-212ENST00000620787 AZU1P20160 251 aa14.96□□□□□ -0.02
PDLIM3-212ENST00000620787 HRNRQ86YZ3 2850 aaPredicted RBP14.95□□□□□ -0.02
PDLIM3-212ENST00000620787 A0A1B0GWB2 263 aa14.95□□□□□ -0.02
PDLIM3-212ENST00000620787 ZNF207O43670 478 aaKnown RBP14.95□□□□□ -0.02
PDLIM3-212ENST00000620787 RRN3P1Q2M238 152 aa14.95□□□□□ -0.02
PDLIM3-212ENST00000620787 FBXL19-AS1Q494R0 122 aa14.95□□□□□ -0.02
PDLIM3-212ENST00000620787 PRR9Q5T870 116 aa14.95□□□□□ -0.02
PDLIM3-212ENST00000620787 GTSF1LQ9H1H1 148 aa14.95□□□□□ -0.02
PDLIM3-212ENST00000620787 TSSC4Q9Y5U2 329 aaPredicted RBP14.95□□□□□ -0.02
PDLIM3-212ENST00000620787 ZFP36P26651 326 aaKnown RBP14.95□□□□□ -0.02
PDLIM3-212ENST00000620787 CD300EQ496F6 205 aaPredicted RBP14.94□□□□□ -0.02
PDLIM3-212ENST00000620787 C11orf71Q6IPW1 123 aa14.94□□□□□ -0.02
PDLIM3-212ENST00000620787 AMTNQ6UX39 209 aa14.94□□□□□ -0.02
PDLIM3-212ENST00000620787 SIGMAR1Q99720 223 aa14.94□□□□□ -0.02
PDLIM3-212ENST00000620787 MYMXA0A1B0GTQ4 84 aa14.93□□□□□ -0.02
PDLIM3-212ENST00000620787 SH2D6Q7Z4S9 175 aa14.93□□□□□ -0.02
PDLIM3-212ENST00000620787 METTL26Q96S19 204 aa14.93□□□□□ -0.02
PDLIM3-212ENST00000620787 PRO0461Q9UI25 63 aa14.93□□□□□ -0.02
PDLIM3-212ENST00000620787 U3KQE9 123 aa14.93□□□□□ -0.02
PDLIM3-212ENST00000620787 CHTOPQ9Y3Y2 248 aaKnown RBP14.93□□□□□ -0.02
PDLIM3-212ENST00000620787 GAGE12HA6NDE8 117 aa14.92□□□□□ -0.02
PDLIM3-212ENST00000620787 OR11H12B2RN74 326 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms