RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 ZNF345Q14585 488 aa11.27□□□□□ -0.61
BRCA1-228ENST00000618469 LINC00467Q9BRT7 94 aa11.27□□□□□ -0.61
BRCA1-228ENST00000618469 GSN-AS1Q9NRJ2 163 aa11.27□□□□□ -0.61
BRCA1-228ENST00000618469 CYTL1Q9NRR1 136 aa11.27□□□□□ -0.61
BRCA1-228ENST00000618469 TMEM167BQ9NRX6 74 aa11.27□□□□□ -0.61
BRCA1-228ENST00000618469 IGHV1OR15-1A0A075B7D0 117 aa11.26□□□□□ -0.61
BRCA1-228ENST00000618469 TRAV8-1A0A0A6YYK1 113 aa11.26□□□□□ -0.61
BRCA1-228ENST00000618469 CTXND1A0A1B0GTU2 59 aa11.26□□□□□ -0.61
BRCA1-228ENST00000618469 GAGE12BA1L429 117 aa11.26□□□□□ -0.61
BRCA1-228ENST00000618469 GAGE7O76087 117 aa11.26□□□□□ -0.61
BRCA1-228ENST00000618469 GAGE12FP0CL80 117 aa11.26□□□□□ -0.61
BRCA1-228ENST00000618469 GAGE12GP0CL81 117 aa11.26□□□□□ -0.61
BRCA1-228ENST00000618469 GAGE12IP0CL82 117 aa11.26□□□□□ -0.61
BRCA1-228ENST00000618469 ZNF726P1Q15940 193 aa11.26□□□□□ -0.61
BRCA1-228ENST00000618469 ANXA2RQ3ZCQ2 193 aa11.26□□□□□ -0.61
BRCA1-228ENST00000618469 LINC00612Q8N6U2 182 aa11.26□□□□□ -0.61
BRCA1-228ENST00000618469 C5orf17Q8NAS9 161 aa11.26□□□□□ -0.61
BRCA1-228ENST00000618469 C11orf72Q8NBR9 251 aa11.26□□□□□ -0.61
BRCA1-228ENST00000618469 TMED6Q8WW62 240 aa11.26□□□□□ -0.61
BRCA1-228ENST00000618469 ST6GAL2Q96JF0 529 aa11.26□□□□□ -0.61
BRCA1-228ENST00000618469 ARPC5LQ9BPX5 153 aa11.26□□□□□ -0.61
BRCA1-228ENST00000618469 LENEPQ9Y5L5 61 aa11.26□□□□□ -0.61
BRCA1-228ENST00000618469 DNAH6Q9C0G6 4158 aa11.25□□□□□ -0.61
BRCA1-228ENST00000618469 GGTLC3B5MD39 225 aa11.25□□□□□ -0.61
BRCA1-228ENST00000618469 MUC21Q5SSG8 566 aa11.25□□□□□ -0.61
BRCA1-228ENST00000618469 Q6ZTI0 123 aa11.25□□□□□ -0.61
BRCA1-228ENST00000618469 UBE2DNLQ8IWF7 75 aa11.25□□□□□ -0.61
BRCA1-228ENST00000618469 KCNRGQ8N5I3 272 aa11.25□□□□□ -0.61
BRCA1-228ENST00000618469 OR11H4Q8NGC9 324 aa11.25□□□□□ -0.61
BRCA1-228ENST00000618469 SUN5Q8TC36 379 aa11.25□□□□□ -0.61
BRCA1-228ENST00000618469 KRTAP4-5Q9BYR2 181 aa11.25□□□□□ -0.61
BRCA1-228ENST00000618469 TP53TG3Q9ULZ0 132 aa11.25□□□□□ -0.61
BRCA1-228ENST00000618469 F6UZH7 168 aa11.24□□□□□ -0.61
BRCA1-228ENST00000618469 TCL1AP56279 114 aa11.24□□□□□ -0.61
BRCA1-228ENST00000618469 DAZ2Q13117 558 aaKnown RBP11.24□□□□□ -0.61
BRCA1-228ENST00000618469 ARL6IP6Q8N6S5 226 aa11.24□□□□□ -0.61
BRCA1-228ENST00000618469 C15orf53Q8NAA6 179 aa11.24□□□□□ -0.61
BRCA1-228ENST00000618469 TRGV1A0A0A0MS02 117 aa11.23□□□□□ -0.61
BRCA1-228ENST00000618469 HMSDA8MTL9 139 aa11.23□□□□□ -0.61
BRCA1-228ENST00000618469 TCRAP04437 139 aa11.23□□□□□ -0.61
BRCA1-228ENST00000618469 FGF8P55075 233 aaPredicted RBP11.23□□□□□ -0.61
BRCA1-228ENST00000618469 IBA57Q5T440 356 aaKnown RBP11.23□□□□□ -0.61
BRCA1-228ENST00000618469 Q6AWC8 147 aa11.23□□□□□ -0.61
BRCA1-228ENST00000618469 POM121L12Q8N7R1 296 aa11.23□□□□□ -0.61
BRCA1-228ENST00000618469 SGK494Q96LW2 274 aa11.23□□□□□ -0.61
BRCA1-228ENST00000618469 TMPRSS5Q9H3S3 457 aa11.23□□□□□ -0.61
BRCA1-228ENST00000618469 NAGKQ9UJ70 344 aa11.23□□□□□ -0.61
BRCA1-228ENST00000618469 KLF12Q9Y4X4 402 aa11.23□□□□□ -0.61
BRCA1-228ENST00000618469 SERTM2A0A1B0GWG4 89 aa11.22□□□□□ -0.61
BRCA1-228ENST00000618469 KANTRA0A1W2PQU2 76 aa11.22□□□□□ -0.61
BRCA1-228ENST00000618469 MAP1LC3B2A6NCE7 125 aa11.22□□□□□ -0.61
BRCA1-228ENST00000618469 K7EQM0 130 aa11.22□□□□□ -0.61
BRCA1-228ENST00000618469 BCL2L11O43521 198 aa11.22□□□□□ -0.61
BRCA1-228ENST00000618469 UBE2G2P60604 165 aa11.22□□□□□ -0.61
BRCA1-228ENST00000618469 SUMO1P63165 101 aaKnown RBP11.22□□□□□ -0.61
BRCA1-228ENST00000618469 ZNF415Q09FC8 603 aa11.22□□□□□ -0.61
BRCA1-228ENST00000618469 NDFIP1Q9BT67 221 aa11.22□□□□□ -0.61
BRCA1-228ENST00000618469 ZNF471Q9BX82 626 aaPredicted RBP11.22□□□□□ -0.61
BRCA1-228ENST00000618469 MAP1LC3BQ9GZQ8 125 aa11.22□□□□□ -0.61
BRCA1-228ENST00000618469 TREM1Q9NP99 234 aa11.22□□□□□ -0.61
BRCA1-228ENST00000618469 TRGV2A0A075B6R0 118 aa11.21□□□□□ -0.61
BRCA1-228ENST00000618469 A0A0D9SG52 128 aa11.21□□□□□ -0.61
BRCA1-228ENST00000618469 NUDT3O95989 172 aa11.21□□□□□ -0.61
BRCA1-228ENST00000618469 OR5I1Q13606 314 aa11.21□□□□□ -0.61
BRCA1-228ENST00000618469 CYB561D1Q8N8Q1 229 aa11.21□□□□□ -0.61
BRCA1-228ENST00000618469 TVP23CQ96ET8 276 aa11.21□□□□□ -0.61
BRCA1-228ENST00000618469 MRPL16Q9NX20 251 aaKnown RBP11.21□□□□□ -0.61
BRCA1-228ENST00000618469 A0A1W2PRE2 83 aa11.2□□□□□ -0.62
BRCA1-228ENST00000618469 PFDN1O60925 122 aa11.2□□□□□ -0.62
BRCA1-228ENST00000618469 HOXA5P20719 270 aa11.2□□□□□ -0.62
BRCA1-228ENST00000618469 TMEM183BQ1AE95 376 aa11.2□□□□□ -0.62
BRCA1-228ENST00000618469 FAM159AQ6UWV7 190 aa11.2□□□□□ -0.62
BRCA1-228ENST00000618469 TMEM183AQ8IXX5 376 aa11.2□□□□□ -0.62
BRCA1-228ENST00000618469 ATG101Q9BSB4 218 aa11.2□□□□□ -0.62
BRCA1-228ENST00000618469 EPDR1Q9UM22 224 aa11.2□□□□□ -0.62
BRCA1-228ENST00000618469 PKHD1P08F94 4074 aa11.2□□□□□ -0.62
BRCA1-228ENST00000618469 TRGV11A0A075B6L2 103 aa11.19□□□□□ -0.62
BRCA1-228ENST00000618469 TRAV26-1A0A087WT03 109 aa11.19□□□□□ -0.62
BRCA1-228ENST00000618469 TRAV21A0A0B4J279 112 aa11.19□□□□□ -0.62
BRCA1-228ENST00000618469 SPINK4O60575 86 aa11.19□□□□□ -0.62
BRCA1-228ENST00000618469 FHITP49789 147 aa11.19□□□□□ -0.62
BRCA1-228ENST00000618469 TMEM75Q8N9X5 138 aa11.19□□□□□ -0.62
BRCA1-228ENST00000618469 PSG8Q9UQ74 426 aa11.19□□□□□ -0.62
BRCA1-228ENST00000618469 ABCA13Q86UQ4 5058 aa11.18□□□□□ -0.62
BRCA1-228ENST00000618469 A0A0J9YY99 117 aa11.18□□□□□ -0.62
BRCA1-228ENST00000618469 A0A1B0GVY2 172 aa11.18□□□□□ -0.62
BRCA1-228ENST00000618469 IFNA7P01567 189 aa11.18□□□□□ -0.62
BRCA1-228ENST00000618469 FLI1Q01543 452 aaPredicted RBP11.18□□□□□ -0.62
BRCA1-228ENST00000618469 ZFP69Q49AA0 526 aa11.18□□□□□ -0.62
BRCA1-228ENST00000618469 PRNTQ86SH4 94 aa11.18□□□□□ -0.62
BRCA1-228ENST00000618469 C8orf49Q96NF6 230 aa11.18□□□□□ -0.62
BRCA1-228ENST00000618469 MDFICQ9P1T7 246 aa11.18□□□□□ -0.62
BRCA1-228ENST00000618469 NACAE9PAV3 2078 aa11.17□□□□□ -0.62
BRCA1-228ENST00000618469 FAM74A7A6NL05 159 aa11.17□□□□□ -0.62
BRCA1-228ENST00000618469 PEX7O00628 323 aa11.17□□□□□ -0.62
BRCA1-228ENST00000618469 IGLV2-11P01706 119 aa11.17□□□□□ -0.62
BRCA1-228ENST00000618469 SEC11BP0C7V7 166 aa11.17□□□□□ -0.62
BRCA1-228ENST00000618469 MED14OSP0DP75 135 aa11.17□□□□□ -0.62
BRCA1-228ENST00000618469 RNF212Q495C1 297 aa11.17□□□□□ -0.62
BRCA1-228ENST00000618469 Q6ZNX1 250 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms