RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 IBA57Q5T440 356 aaKnown RBP10.68□□□□□ -0.7
TRIM28-203ENST00000593582 ARPC5LQ9BPX5 153 aa10.68□□□□□ -0.7
TRIM28-203ENST00000593582 TMPRSS5Q9H3S3 457 aa10.68□□□□□ -0.7
TRIM28-203ENST00000593582 RPH3ALQ9UNE2 315 aa10.68□□□□□ -0.7
TRIM28-203ENST00000593582 ARL14EPLP0DKL9 152 aa10.67□□□□□ -0.7
TRIM28-203ENST00000593582 ATP6V0CP27449 155 aa10.67□□□□□ -0.7
TRIM28-203ENST00000593582 SERF2P84101 59 aa10.67□□□□□ -0.7
TRIM28-203ENST00000593582 Q6ZQT7 251 aa10.67□□□□□ -0.7
TRIM28-203ENST00000593582 Q6ZR54 194 aa10.67□□□□□ -0.7
TRIM28-203ENST00000593582 ARL6IP6Q8N6S5 226 aa10.67□□□□□ -0.7
TRIM28-203ENST00000593582 TMED6Q8WW62 240 aa10.67□□□□□ -0.7
TRIM28-203ENST00000593582 KLF12Q9Y4X4 402 aa10.67□□□□□ -0.7
TRIM28-203ENST00000593582 FXYD6-FXYD2A0A087WZ82 144 aa10.66□□□□□ -0.7
TRIM28-203ENST00000593582 A0A0J9YY99 117 aa10.66□□□□□ -0.7
TRIM28-203ENST00000593582 SPINK4O60575 86 aa10.66□□□□□ -0.7
TRIM28-203ENST00000593582 OR2T35Q8NGX2 323 aa10.66□□□□□ -0.7
TRIM28-203ENST00000593582 RAB24Q969Q5 203 aa10.66□□□□□ -0.7
TRIM28-203ENST00000593582 C18orf15Q96N68 181 aa10.66□□□□□ -0.7
TRIM28-203ENST00000593582 TP53TG3Q9ULZ0 132 aa10.66□□□□□ -0.7
TRIM28-203ENST00000593582 FAT2Q9NYQ8 4349 aa10.65□□□□□ -0.7
TRIM28-203ENST00000593582 BORCS7-ASMTA0A0B4J1R7 106 aa10.65□□□□□ -0.7
TRIM28-203ENST00000593582 H3BNG1 76 aa10.65□□□□□ -0.7
TRIM28-203ENST00000593582 STAG3L2P0CL84 134 aa10.65□□□□□ -0.7
TRIM28-203ENST00000593582 STAG3L3P0CL85 134 aa10.65□□□□□ -0.7
TRIM28-203ENST00000593582 ZNF415Q09FC8 603 aa10.65□□□□□ -0.7
TRIM28-203ENST00000593582 SOHLH1Q5JUK2 328 aa10.65□□□□□ -0.7
TRIM28-203ENST00000593582 GOLT1AQ6ZVE7 132 aa10.65□□□□□ -0.7
TRIM28-203ENST00000593582 SH3BGRL3Q9H299 93 aa10.65□□□□□ -0.7
TRIM28-203ENST00000593582 TNFSF18Q9UNG2 199 aa10.65□□□□□ -0.7
TRIM28-203ENST00000593582 RNF222A6NCQ9 220 aa10.64□□□□□ -0.71
TRIM28-203ENST00000593582 PRSS29PA6NIE9 313 aa10.64□□□□□ -0.71
TRIM28-203ENST00000593582 RTL8CO15255 209 aa10.64□□□□□ -0.71
TRIM28-203ENST00000593582 MUC21Q5SSG8 566 aa10.64□□□□□ -0.71
TRIM28-203ENST00000593582 Q6AWC8 147 aa10.64□□□□□ -0.71
TRIM28-203ENST00000593582 FAM159AQ6UWV7 190 aa10.64□□□□□ -0.71
TRIM28-203ENST00000593582 SSX7Q7RTT5 188 aa10.64□□□□□ -0.71
TRIM28-203ENST00000593582 ZNRF2Q8NHG8 242 aa10.64□□□□□ -0.71
TRIM28-203ENST00000593582 ST6GAL2Q96JF0 529 aa10.64□□□□□ -0.71
TRIM28-203ENST00000593582 ACTR3CQ9C0K3 210 aaPredicted RBP10.64□□□□□ -0.71
TRIM28-203ENST00000593582 LINC00588Q9Y4M8 146 aa10.64□□□□□ -0.71
TRIM28-203ENST00000593582 CXorf1O96002 111 aa10.63□□□□□ -0.71
TRIM28-203ENST00000593582 GCHFRP30047 84 aa10.63□□□□□ -0.71
TRIM28-203ENST00000593582 C1orf134Q5TEV5 83 aa10.63□□□□□ -0.71
TRIM28-203ENST00000593582 RPL7L1Q6DKI1 246 aaKnown RBP10.63□□□□□ -0.71
TRIM28-203ENST00000593582 TRGV11A0A075B6L2 103 aa10.62□□□□□ -0.71
TRIM28-203ENST00000593582 TRAV8-1A0A0A6YYK1 113 aa10.62□□□□□ -0.71
TRIM28-203ENST00000593582 SERTM2A0A1B0GWG4 89 aa10.62□□□□□ -0.71
TRIM28-203ENST00000593582 GNG5P63218 68 aa10.62□□□□□ -0.71
TRIM28-203ENST00000593582 C5orf17Q8NAS9 161 aa10.62□□□□□ -0.71
TRIM28-203ENST00000593582 SUN5Q8TC36 379 aa10.62□□□□□ -0.71
TRIM28-203ENST00000593582 TREM1Q9NP99 234 aa10.62□□□□□ -0.71
TRIM28-203ENST00000593582 TMEM167BQ9NRX6 74 aa10.62□□□□□ -0.71
TRIM28-203ENST00000593582 MRPL16Q9NX20 251 aaKnown RBP10.62□□□□□ -0.71
TRIM28-203ENST00000593582 MDFICQ9P1T7 246 aa10.62□□□□□ -0.71
TRIM28-203ENST00000593582 NAGKQ9UJ70 344 aa10.62□□□□□ -0.71
TRIM28-203ENST00000593582 NACAE9PAV3 2078 aa10.61□□□□□ -0.71
TRIM28-203ENST00000593582 TRAV21A0A0B4J279 112 aa10.61□□□□□ -0.71
TRIM28-203ENST00000593582 NBDYA0A0U1RRE5 68 aa10.61□□□□□ -0.71
TRIM28-203ENST00000593582 K7EQM0 130 aa10.61□□□□□ -0.71
TRIM28-203ENST00000593582 TMEM183BQ1AE95 376 aa10.61□□□□□ -0.71
TRIM28-203ENST00000593582 IQCF2Q8IXL9 164 aa10.61□□□□□ -0.71
TRIM28-203ENST00000593582 TMEM183AQ8IXX5 376 aa10.61□□□□□ -0.71
TRIM28-203ENST00000593582 NDFIP1Q9BT67 221 aa10.61□□□□□ -0.71
TRIM28-203ENST00000593582 DNAH17Q9UFH2 4485 aa10.6□□□□□ -0.71
TRIM28-203ENST00000593582 IGHV3-53P01767 116 aa10.6□□□□□ -0.71
TRIM28-203ENST00000593582 TCRAP04437 139 aa10.6□□□□□ -0.71
TRIM28-203ENST00000593582 SLAQ13239 276 aa10.6□□□□□ -0.71
TRIM28-203ENST00000593582 TDRG1Q3Y452 100 aa10.6□□□□□ -0.71
TRIM28-203ENST00000593582 VSIG2Q96IQ7 327 aa10.6□□□□□ -0.71
TRIM28-203ENST00000593582 SPXQ9BT56 116 aa10.6□□□□□ -0.71
TRIM28-203ENST00000593582 A0A1B0GVY2 172 aa10.59□□□□□ -0.71
TRIM28-203ENST00000593582 F6UZH7 168 aa10.59□□□□□ -0.71
TRIM28-203ENST00000593582 TAAR5O14804 337 aa10.59□□□□□ -0.71
TRIM28-203ENST00000593582 ARPC5O15511 151 aa10.59□□□□□ -0.71
TRIM28-203ENST00000593582 SUMO1P63165 101 aaKnown RBP10.59□□□□□ -0.71
TRIM28-203ENST00000593582 ESRGQ1W209 222 aa10.59□□□□□ -0.71
TRIM28-203ENST00000593582 TVP23CQ96ET8 276 aa10.59□□□□□ -0.71
TRIM28-203ENST00000593582 SGK494Q96LW2 274 aa10.59□□□□□ -0.71
TRIM28-203ENST00000593582 Q9H8V8 135 aa10.59□□□□□ -0.71
TRIM28-203ENST00000593582 A0A096LPF7 62 aa10.58□□□□□ -0.72
TRIM28-203ENST00000593582 CTXND1A0A1B0GTU2 59 aa10.58□□□□□ -0.72
TRIM28-203ENST00000593582 G3V3Q6 166 aa10.58□□□□□ -0.72
TRIM28-203ENST00000593582 PAX4O43316 350 aa10.58□□□□□ -0.72
TRIM28-203ENST00000593582 AKR1C8PQ5T2L2 129 aa10.58□□□□□ -0.72
TRIM28-203ENST00000593582 RASL10AQ92737 203 aa10.58□□□□□ -0.72
TRIM28-203ENST00000593582 SDF2L1Q9HCN8 221 aa10.58□□□□□ -0.72
TRIM28-203ENST00000593582 PRO0255Q9UI72 69 aa10.58□□□□□ -0.72
TRIM28-203ENST00000593582 EPDR1Q9UM22 224 aa10.58□□□□□ -0.72
TRIM28-203ENST00000593582 HHLA3Q9XRX5 114 aa10.58□□□□□ -0.72
TRIM28-203ENST00000593582 PKHD1P08F94 4074 aa10.58□□□□□ -0.72
TRIM28-203ENST00000593582 A0A1W2PRE2 83 aa10.57□□□□□ -0.72
TRIM28-203ENST00000593582 GGTLC3B5MD39 225 aa10.57□□□□□ -0.72
TRIM28-203ENST00000593582 CYB561D1Q8N8Q1 229 aa10.57□□□□□ -0.72
TRIM28-203ENST00000593582 KCNS1Q96KK3 526 aa10.57□□□□□ -0.72
TRIM28-203ENST00000593582 UPK3BQ9BT76 320 aa10.57□□□□□ -0.72
TRIM28-203ENST00000593582 MRPS16Q9Y3D3 137 aaKnown RBP10.57□□□□□ -0.72
TRIM28-203ENST00000593582 ICOSQ9Y6W8 199 aa10.57□□□□□ -0.72
TRIM28-203ENST00000593582 TRGV4A0A0C4DH28 118 aa10.56□□□□□ -0.72
TRIM28-203ENST00000593582 IGHV3-16A0A0C4DH30 117 aa10.56□□□□□ -0.72
TRIM28-203ENST00000593582 FBLL1A6NHQ2 334 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms