RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 ST6GAL2Q96JF0 529 aa9.86□□□□□ -0.83
CLIP3-205ENST00000592017 TRBV7-9A0A0J9YWB2 115 aa9.85□□□□□ -0.83
CLIP3-205ENST00000592017 F6UZH7 168 aa9.85□□□□□ -0.83
CLIP3-205ENST00000592017 UBE2G2P60604 165 aa9.85□□□□□ -0.83
CLIP3-205ENST00000592017 MUC21Q5SSG8 566 aa9.85□□□□□ -0.83
CLIP3-205ENST00000592017 EIF4E3Q8N5X7 224 aaKnown RBP9.85□□□□□ -0.83
CLIP3-205ENST00000592017 C5orf17Q8NAS9 161 aa9.85□□□□□ -0.83
CLIP3-205ENST00000592017 ZNF680Q8NEM1 530 aa9.85□□□□□ -0.83
CLIP3-205ENST00000592017 SUN5Q8TC36 379 aa9.85□□□□□ -0.83
CLIP3-205ENST00000592017 SGK494Q96LW2 274 aa9.85□□□□□ -0.83
CLIP3-205ENST00000592017 DNAH17Q9UFH2 4485 aa9.85□□□□□ -0.83
CLIP3-205ENST00000592017 FAT2Q9NYQ8 4349 aa9.84□□□□□ -0.83
CLIP3-205ENST00000592017 IGHV1OR15-1A0A075B7D0 117 aa9.84□□□□□ -0.83
CLIP3-205ENST00000592017 GAGE12BA1L429 117 aa9.84□□□□□ -0.83
CLIP3-205ENST00000592017 MAP1LC3B2A6NCE7 125 aa9.84□□□□□ -0.83
CLIP3-205ENST00000592017 GGTLC3B5MD39 225 aa9.84□□□□□ -0.83
CLIP3-205ENST00000592017 F5H768 121 aa9.84□□□□□ -0.83
CLIP3-205ENST00000592017 GAGE7O76087 117 aa9.84□□□□□ -0.83
CLIP3-205ENST00000592017 GAGE12FP0CL80 117 aa9.84□□□□□ -0.83
CLIP3-205ENST00000592017 GAGE12GP0CL81 117 aa9.84□□□□□ -0.83
CLIP3-205ENST00000592017 GAGE12IP0CL82 117 aa9.84□□□□□ -0.83
CLIP3-205ENST00000592017 SUMO1P63165 101 aaKnown RBP9.84□□□□□ -0.83
CLIP3-205ENST00000592017 TMEM88Q6PEY1 159 aa9.84□□□□□ -0.83
CLIP3-205ENST00000592017 Q6ZNX1 250 aa9.84□□□□□ -0.83
CLIP3-205ENST00000592017 MAP1LC3BQ9GZQ8 125 aa9.84□□□□□ -0.83
CLIP3-205ENST00000592017 TMPRSS5Q9H3S3 457 aa9.84□□□□□ -0.83
CLIP3-205ENST00000592017 GSN-AS1Q9NRJ2 163 aa9.84□□□□□ -0.83
CLIP3-205ENST00000592017 NAGKQ9UJ70 344 aa9.84□□□□□ -0.83
CLIP3-205ENST00000592017 TP53TG3Q9ULZ0 132 aa9.84□□□□□ -0.83
CLIP3-205ENST00000592017 HECTD4Q9Y4D8 3996 aa9.83□□□□□ -0.84
CLIP3-205ENST00000592017 K7EQM0 130 aa9.83□□□□□ -0.84
CLIP3-205ENST00000592017 TCRAP04437 139 aa9.83□□□□□ -0.84
CLIP3-205ENST00000592017 ATP5G1P05496 136 aa9.83□□□□□ -0.84
CLIP3-205ENST00000592017 ATP5G3P48201 142 aa9.83□□□□□ -0.84
CLIP3-205ENST00000592017 TMUB2Q71RG4 321 aa9.83□□□□□ -0.84
CLIP3-205ENST00000592017 ARL6IP6Q8N6S5 226 aa9.83□□□□□ -0.84
CLIP3-205ENST00000592017 TMED6Q8WW62 240 aa9.83□□□□□ -0.84
CLIP3-205ENST00000592017 LINC00467Q9BRT7 94 aa9.83□□□□□ -0.84
CLIP3-205ENST00000592017 NDFIP1Q9BT67 221 aa9.83□□□□□ -0.84
CLIP3-205ENST00000592017 LENEPQ9Y5L5 61 aa9.83□□□□□ -0.84
CLIP3-205ENST00000592017 SERTM2A0A1B0GWG4 89 aa9.82□□□□□ -0.84
CLIP3-205ENST00000592017 FHITP49789 147 aa9.82□□□□□ -0.84
CLIP3-205ENST00000592017 ANXA2RQ3ZCQ2 193 aa9.82□□□□□ -0.84
CLIP3-205ENST00000592017 TCTE3Q8IZS6 198 aa9.82□□□□□ -0.84
CLIP3-205ENST00000592017 C11orf72Q8NBR9 251 aa9.82□□□□□ -0.84
CLIP3-205ENST00000592017 FAM213BQ8TBF2 198 aa9.82□□□□□ -0.84
CLIP3-205ENST00000592017 FAM210BQ96KR6 192 aa9.82□□□□□ -0.84
CLIP3-205ENST00000592017 TREM1Q9NP99 234 aa9.82□□□□□ -0.84
CLIP3-205ENST00000592017 EPDR1Q9UM22 224 aa9.82□□□□□ -0.84
CLIP3-205ENST00000592017 TRGV1A0A0A0MS02 117 aa9.81□□□□□ -0.84
CLIP3-205ENST00000592017 A0A1B0GV50 99 aa9.81□□□□□ -0.84
CLIP3-205ENST00000592017 A0A1W2PRE2 83 aa9.81□□□□□ -0.84
CLIP3-205ENST00000592017 IFNA7P01567 189 aa9.81□□□□□ -0.84
CLIP3-205ENST00000592017 SEC11BP0C7V7 166 aa9.81□□□□□ -0.84
CLIP3-205ENST00000592017 EIF5AP63241 154 aaKnown RBP9.81□□□□□ -0.84
CLIP3-205ENST00000592017 ZNF415Q09FC8 603 aa9.81□□□□□ -0.84
CLIP3-205ENST00000592017 Q6AWC8 147 aa9.81□□□□□ -0.84
CLIP3-205ENST00000592017 Q6ZTI0 123 aa9.81□□□□□ -0.84
CLIP3-205ENST00000592017 CYB561D1Q8N8Q1 229 aa9.81□□□□□ -0.84
CLIP3-205ENST00000592017 STOML3Q8TAV4 291 aa9.81□□□□□ -0.84
CLIP3-205ENST00000592017 TVP23CQ96ET8 276 aa9.81□□□□□ -0.84
CLIP3-205ENST00000592017 KLF12Q9Y4X4 402 aa9.81□□□□□ -0.84
CLIP3-205ENST00000592017 TRGV2A0A075B6R0 118 aa9.8□□□□□ -0.84
CLIP3-205ENST00000592017 TPT1P13693 172 aaKnown RBP9.8□□□□□ -0.84
CLIP3-205ENST00000592017 TCL1AP56279 114 aa9.8□□□□□ -0.84
CLIP3-205ENST00000592017 DAZ2Q13117 558 aaKnown RBP9.8□□□□□ -0.84
CLIP3-205ENST00000592017 IBA57Q5T440 356 aaKnown RBP9.8□□□□□ -0.84
CLIP3-205ENST00000592017 FAM159AQ6UWV7 190 aa9.8□□□□□ -0.84
CLIP3-205ENST00000592017 PRNTQ86SH4 94 aa9.8□□□□□ -0.84
CLIP3-205ENST00000592017 UBE2DNLQ8IWF7 75 aa9.8□□□□□ -0.84
CLIP3-205ENST00000592017 LINC00612Q8N6U2 182 aa9.8□□□□□ -0.84
CLIP3-205ENST00000592017 ATG101Q9BSB4 218 aa9.8□□□□□ -0.84
CLIP3-205ENST00000592017 PSG8Q9UQ74 426 aa9.8□□□□□ -0.84
CLIP3-205ENST00000592017 HERC2O95714 4834 aa9.8□□□□□ -0.84
CLIP3-205ENST00000592017 TRAV21A0A0B4J279 112 aa9.79□□□□□ -0.84
CLIP3-205ENST00000592017 FAM74A7A6NL05 159 aa9.79□□□□□ -0.84
CLIP3-205ENST00000592017 UMAD1C9J7I0 102 aa9.79□□□□□ -0.84
CLIP3-205ENST00000592017 P0DMU3 169 aa9.79□□□□□ -0.84
CLIP3-205ENST00000592017 FAM231AP0DMU4 169 aa9.79□□□□□ -0.84
CLIP3-205ENST00000592017 FAM231CP0DMU5 169 aa9.79□□□□□ -0.84
CLIP3-205ENST00000592017 FLI1Q01543 452 aaPredicted RBP9.79□□□□□ -0.84
CLIP3-205ENST00000592017 OR5I1Q13606 314 aa9.79□□□□□ -0.84
CLIP3-205ENST00000592017 TMEM183BQ1AE95 376 aa9.79□□□□□ -0.84
CLIP3-205ENST00000592017 AKAP14Q86UN6 197 aa9.79□□□□□ -0.84
CLIP3-205ENST00000592017 TMEM183AQ8IXX5 376 aa9.79□□□□□ -0.84
CLIP3-205ENST00000592017 POM121L12Q8N7R1 296 aa9.79□□□□□ -0.84
CLIP3-205ENST00000592017 SFT2D1Q8WV19 159 aa9.79□□□□□ -0.84
CLIP3-205ENST00000592017 C8orf49Q96NF6 230 aa9.79□□□□□ -0.84
CLIP3-205ENST00000592017 MRPL16Q9NX20 251 aaKnown RBP9.79□□□□□ -0.84
CLIP3-205ENST00000592017 TRGV11A0A075B6L2 103 aa9.78□□□□□ -0.84
CLIP3-205ENST00000592017 TRAV34A0A0B4J273 112 aa9.78□□□□□ -0.84
CLIP3-205ENST00000592017 PEX7O00628 323 aa9.78□□□□□ -0.84
CLIP3-205ENST00000592017 NUDT3O95989 172 aa9.78□□□□□ -0.84
CLIP3-205ENST00000592017 C1QBP02746 253 aa9.78□□□□□ -0.84
CLIP3-205ENST00000592017 ZFP69Q49AA0 526 aa9.78□□□□□ -0.84
CLIP3-205ENST00000592017 CST9LP1Q5W188 147 aa9.78□□□□□ -0.84
CLIP3-205ENST00000592017 TMEM75Q8N9X5 138 aa9.78□□□□□ -0.84
CLIP3-205ENST00000592017 C15orf53Q8NAA6 179 aa9.78□□□□□ -0.84
CLIP3-205ENST00000592017 LINC00479Q96M42 142 aa9.78□□□□□ -0.84
CLIP3-205ENST00000592017 A0A0J9YY99 117 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms