RNA–Protein interactions for RNA: ENST00000580157.2

CDH19-205, Transcript of cadherin 19, humanhuman

TSL 4

Gene CDH19, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-205ENST00000580157 ACOT6Q3I5F7 207 aaPredicted RBP0.73□□□□□ -2.29
CDH19-205ENST00000580157 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.73□□□□□ -2.29
CDH19-205ENST00000580157 CCDC122Q5T0U0 273 aa0.73□□□□□ -2.29
CDH19-205ENST00000580157 C1orf134Q5TEV5 83 aa0.73□□□□□ -2.29
CDH19-205ENST00000580157 LCN15Q6UWW0 184 aa0.73□□□□□ -2.29
CDH19-205ENST00000580157 UNQ6190/PRO20217Q6UXQ8 127 aa0.73□□□□□ -2.29
CDH19-205ENST00000580157 CLVS1Q8IUQ0 354 aaPredicted RBP0.73□□□□□ -2.29
CDH19-205ENST00000580157 ANKRD29Q8N6D5 301 aa0.73□□□□□ -2.29
CDH19-205ENST00000580157 OR8J2Q8NGG1 315 aa0.73□□□□□ -2.29
CDH19-205ENST00000580157 CCL4L1Q8NHW4 92 aa0.73□□□□□ -2.29
CDH19-205ENST00000580157 MRPL30Q8TCC3 161 aaKnown RBP0.73□□□□□ -2.29
CDH19-205ENST00000580157 PATE1Q8WXA2 126 aa0.73□□□□□ -2.29
CDH19-205ENST00000580157 HIST1H2BHQ93079 126 aa0.73□□□□□ -2.29
CDH19-205ENST00000580157 PPP1R14BQ96C90 147 aa0.73□□□□□ -2.29
CDH19-205ENST00000580157 IMP4Q96G21 291 aaKnown RBP0.73□□□□□ -2.29
CDH19-205ENST00000580157 HIST1H2BNQ99877 126 aa0.73□□□□□ -2.29
CDH19-205ENST00000580157 HIST1H2BMQ99879 126 aa0.73□□□□□ -2.29
CDH19-205ENST00000580157 SOX21Q9Y651 276 aaPredicted RBP0.73□□□□□ -2.29
CDH19-205ENST00000580157 IGKV3D-7A0A0C4DH55 119 aa0.72□□□□□ -2.29
CDH19-205ENST00000580157 IGKV3OR2-268A0A0C4DH90 116 aa0.72□□□□□ -2.29
CDH19-205ENST00000580157 A0A1B0GV50 99 aa0.72□□□□□ -2.29
CDH19-205ENST00000580157 PSMD12O00232 456 aaPredicted RBP0.72□□□□□ -2.29
CDH19-205ENST00000580157 MRPS14O60783 128 aaKnown RBP0.72□□□□□ -2.29
CDH19-205ENST00000580157 TNFP01375 233 aa0.72□□□□□ -2.29
CDH19-205ENST00000580157 FKBP2P26885 142 aaKnown RBP0.72□□□□□ -2.29
CDH19-205ENST00000580157 Q6ZQT0 140 aa0.72□□□□□ -2.29
CDH19-205ENST00000580157 NDUFA11Q86Y39 141 aa0.72□□□□□ -2.29
CDH19-205ENST00000580157 OR52R1Q8NGF1 315 aa0.72□□□□□ -2.29
CDH19-205ENST00000580157 PFN4Q8NHR9 129 aa0.72□□□□□ -2.29
CDH19-205ENST00000580157 RASSF5Q8WWW0 418 aa0.72□□□□□ -2.29
CDH19-205ENST00000580157 C11orf40Q8WZ69 217 aa0.72□□□□□ -2.29
CDH19-205ENST00000580157 TMEM106AQ96A25 262 aa0.72□□□□□ -2.29
CDH19-205ENST00000580157 C8orf76Q96K31 380 aa0.72□□□□□ -2.29
CDH19-205ENST00000580157 CYSTM1Q9H1C7 97 aa0.72□□□□□ -2.29
CDH19-205ENST00000580157 PARVGQ9HBI0 331 aa0.72□□□□□ -2.29
CDH19-205ENST00000580157 UBAP1Q9NZ09 502 aa0.72□□□□□ -2.29
CDH19-205ENST00000580157 MRPL27Q9P0M9 148 aaKnown RBP0.72□□□□□ -2.29
CDH19-205ENST00000580157 FLGP20930 4061 aaPredicted RBP0.71□□□□□ -2.3
CDH19-205ENST00000580157 FAM236DA0A1B0GTK5 79 aa0.71□□□□□ -2.3
CDH19-205ENST00000580157 OR4C46A6NHA9 309 aa0.71□□□□□ -2.3
CDH19-205ENST00000580157 CLDN24A6NM45 220 aa0.71□□□□□ -2.3
CDH19-205ENST00000580157 BUB1B-PAK6H3BSN5 160 aa0.71□□□□□ -2.3
CDH19-205ENST00000580157 M0R036 132 aa0.71□□□□□ -2.3
CDH19-205ENST00000580157 FAM236CP0DP71 79 aa0.71□□□□□ -2.3
CDH19-205ENST00000580157 CD79AP11912 226 aa0.71□□□□□ -2.3
CDH19-205ENST00000580157 SPI1P17947 270 aa0.71□□□□□ -2.3
CDH19-205ENST00000580157 NFYAP23511 347 aaPredicted RBP0.71□□□□□ -2.3
CDH19-205ENST00000580157 SULT1A1P50225 295 aa0.71□□□□□ -2.3
CDH19-205ENST00000580157 PSME3P61289 254 aa0.71□□□□□ -2.3
CDH19-205ENST00000580157 LSM6P62312 80 aaKnown RBP0.71□□□□□ -2.3
CDH19-205ENST00000580157 UBE2IP63279 158 aaKnown RBP0.71□□□□□ -2.3
CDH19-205ENST00000580157 NDUFA5Q16718 116 aa0.71□□□□□ -2.3
CDH19-205ENST00000580157 RPL22L1Q6P5R6 122 aaKnown RBP0.71□□□□□ -2.3
CDH19-205ENST00000580157 C20orf196Q8IYI0 205 aa0.71□□□□□ -2.3
CDH19-205ENST00000580157 LRRC25Q8N386 305 aaPredicted RBP0.71□□□□□ -2.3
CDH19-205ENST00000580157 CLDN22Q8N7P3 220 aa0.71□□□□□ -2.3
CDH19-205ENST00000580157 TERB2Q8NHR7 220 aa0.71□□□□□ -2.3
CDH19-205ENST00000580157 DNAJC9Q8WXX5 260 aa0.71□□□□□ -2.3
CDH19-205ENST00000580157 H1FXQ92522 213 aaKnown RBP0.71□□□□□ -2.3
CDH19-205ENST00000580157 CCDC42Q96M95 316 aa0.71□□□□□ -2.3
CDH19-205ENST00000580157 TSPAN32Q96QS1 320 aa0.71□□□□□ -2.3
CDH19-205ENST00000580157 NIPSNAP1Q9BPW8 284 aa0.71□□□□□ -2.3
CDH19-205ENST00000580157 YIPF3Q9GZM5 350 aa0.71□□□□□ -2.3
CDH19-205ENST00000580157 FAIMQ9NVQ4 179 aa0.71□□□□□ -2.3
CDH19-205ENST00000580157 VPS29Q9UBQ0 182 aa0.71□□□□□ -2.3
CDH19-205ENST00000580157 SYNE1Q8NF91 8797 aaKnown RBP0.7□□□□□ -2.3
CDH19-205ENST00000580157 IGKV3-7A0A075B6H7 116 aa0.7□□□□□ -2.3
CDH19-205ENST00000580157 A0A087WUJ7 227 aa0.7□□□□□ -2.3
CDH19-205ENST00000580157 IGKV2-40A0A087WW87 121 aaPredicted RBP0.7□□□□□ -2.3
CDH19-205ENST00000580157 TRAV26-2A0A0B4J265 109 aa0.7□□□□□ -2.3
CDH19-205ENST00000580157 EXOC1LA0A1B0GW35 172 aa0.7□□□□□ -2.3
CDH19-205ENST00000580157 DPRXA6NFQ7 191 aa0.7□□□□□ -2.3
CDH19-205ENST00000580157 M0R2T5 61 aa0.7□□□□□ -2.3
CDH19-205ENST00000580157 CNIH1O95406 144 aa0.7□□□□□ -2.3
CDH19-205ENST00000580157 IGKV2D-40P01614 121 aaPredicted RBP0.7□□□□□ -2.3
CDH19-205ENST00000580157 CTSDP07339 412 aaPredicted RBP0.7□□□□□ -2.3
CDH19-205ENST00000580157 METTL15P1P0C7V9 234 aa0.7□□□□□ -2.3
CDH19-205ENST00000580157 RNASE3P12724 160 aaKnown RBP0.7□□□□□ -2.3
CDH19-205ENST00000580157 RANP62826 216 aaKnown RBP0.7□□□□□ -2.3
CDH19-205ENST00000580157 CTAG1AP78358 180 aa0.7□□□□□ -2.3
CDH19-205ENST00000580157 AESQ08117 197 aa0.7□□□□□ -2.3
CDH19-205ENST00000580157 C10orf55Q5SWW7 151 aa0.7□□□□□ -2.3
CDH19-205ENST00000580157 LPCAT3Q6P1A2 487 aa0.7□□□□□ -2.3
CDH19-205ENST00000580157 AAED1Q7RTV5 226 aa0.7□□□□□ -2.3
CDH19-205ENST00000580157 DCXRQ7Z4W1 244 aa0.7□□□□□ -2.3
CDH19-205ENST00000580157 TRAPPC5Q8IUR0 188 aa0.7□□□□□ -2.3
CDH19-205ENST00000580157 OR13C4Q8NGS5 318 aa0.7□□□□□ -2.3
CDH19-205ENST00000580157 MCFD2Q8NI22 146 aa0.7□□□□□ -2.3
CDH19-205ENST00000580157 TOMM6Q96B49 74 aa0.7□□□□□ -2.3
CDH19-205ENST00000580157 SCGB3A1Q96QR1 104 aa0.7□□□□□ -2.3
CDH19-205ENST00000580157 OR52E6Q96RD3 313 aa0.7□□□□□ -2.3
CDH19-205ENST00000580157 GINS4Q9BRT9 223 aa0.7□□□□□ -2.3
CDH19-205ENST00000580157 TMEM147Q9BVK8 224 aa0.7□□□□□ -2.3
CDH19-205ENST00000580157 PRTFDC1Q9NRG1 225 aa0.7□□□□□ -2.3
CDH19-205ENST00000580157 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
CDH19-205ENST00000580157 TRAV9-1A0A075B6T8 112 aa0.69□□□□□ -2.3
CDH19-205ENST00000580157 TRAV14DV4A0A0A6YYC5 116 aa0.69□□□□□ -2.3
CDH19-205ENST00000580157 TRAV1-1A0A0B4J248 108 aa0.69□□□□□ -2.3
CDH19-205ENST00000580157 F8W036 122 aa0.69□□□□□ -2.3
CDH19-205ENST00000580157 KPNA3O00505 521 aaPredicted RBP0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms