RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 GAGE7O76087 117 aa13.82□□□□□ -0.2
SS18-209ENST00000578595 ATP5G1P05496 136 aa13.82□□□□□ -0.2
SS18-209ENST00000578595 GAGE12FP0CL80 117 aa13.82□□□□□ -0.2
SS18-209ENST00000578595 GAGE12GP0CL81 117 aa13.82□□□□□ -0.2
SS18-209ENST00000578595 GAGE12IP0CL82 117 aa13.82□□□□□ -0.2
SS18-209ENST00000578595 ATP5G3P48201 142 aa13.82□□□□□ -0.2
SS18-209ENST00000578595 SUMO1P63165 101 aaKnown RBP13.82□□□□□ -0.2
SS18-209ENST00000578595 MUC21Q5SSG8 566 aa13.82□□□□□ -0.2
SS18-209ENST00000578595 MAP1LC3BQ9GZQ8 125 aa13.82□□□□□ -0.2
SS18-209ENST00000578595 TMPRSS5Q9H3S3 457 aa13.82□□□□□ -0.2
SS18-209ENST00000578595 GSN-AS1Q9NRJ2 163 aa13.82□□□□□ -0.2
SS18-209ENST00000578595 NAGKQ9UJ70 344 aa13.82□□□□□ -0.2
SS18-209ENST00000578595 IGHV1OR15-1A0A075B7D0 117 aa13.81□□□□□ -0.2
SS18-209ENST00000578595 TRBV7-9A0A0J9YWB2 115 aa13.81□□□□□ -0.2
SS18-209ENST00000578595 F6UZH7 168 aa13.81□□□□□ -0.2
SS18-209ENST00000578595 ZNF324O75467 553 aaPredicted RBP13.81□□□□□ -0.2
SS18-209ENST00000578595 IFNA7P01567 189 aa13.81□□□□□ -0.2
SS18-209ENST00000578595 EIF5AP63241 154 aaKnown RBP13.81□□□□□ -0.2
SS18-209ENST00000578595 TMEM88Q6PEY1 159 aa13.81□□□□□ -0.2
SS18-209ENST00000578595 LENEPQ9Y5L5 61 aa13.81□□□□□ -0.2
SS18-209ENST00000578595 Q6ZQT7 251 aa13.8□□□□□ -0.2
SS18-209ENST00000578595 TMUB2Q71RG4 321 aa13.8□□□□□ -0.2
SS18-209ENST00000578595 STOML3Q8TAV4 291 aa13.8□□□□□ -0.2
SS18-209ENST00000578595 TMED6Q8WW62 240 aa13.8□□□□□ -0.2
SS18-209ENST00000578595 TREM1Q9NP99 234 aa13.8□□□□□ -0.2
SS18-209ENST00000578595 SERTM2A0A1B0GWG4 89 aa13.79□□□□□ -0.2
SS18-209ENST00000578595 GGTLC3B5MD39 225 aa13.79□□□□□ -0.2
SS18-209ENST00000578595 TCRAP04437 139 aa13.79□□□□□ -0.2
SS18-209ENST00000578595 Q6ZNX1 250 aa13.79□□□□□ -0.2
SS18-209ENST00000578595 UBE2DNLQ8IWF7 75 aa13.79□□□□□ -0.2
SS18-209ENST00000578595 ARL6IP6Q8N6S5 226 aa13.79□□□□□ -0.2
SS18-209ENST00000578595 FAM213BQ8TBF2 198 aa13.79□□□□□ -0.2
SS18-209ENST00000578595 FAM210BQ96KR6 192 aa13.79□□□□□ -0.2
SS18-209ENST00000578595 TRGV1A0A0A0MS02 117 aa13.78□□□□□ -0.2
SS18-209ENST00000578595 A0A1B0GV50 99 aa13.78□□□□□ -0.2
SS18-209ENST00000578595 TPT1P13693 172 aaKnown RBP13.78□□□□□ -0.2
SS18-209ENST00000578595 FHITP49789 147 aa13.78□□□□□ -0.2
SS18-209ENST00000578595 ZNF415Q09FC8 603 aa13.78□□□□□ -0.2
SS18-209ENST00000578595 ANXA2RQ3ZCQ2 193 aa13.78□□□□□ -0.2
SS18-209ENST00000578595 FAM159AQ6UWV7 190 aa13.78□□□□□ -0.2
SS18-209ENST00000578595 CYB561D1Q8N8Q1 229 aa13.78□□□□□ -0.2
SS18-209ENST00000578595 SUN5Q8TC36 379 aa13.78□□□□□ -0.2
SS18-209ENST00000578595 LINC00467Q9BRT7 94 aa13.78□□□□□ -0.2
SS18-209ENST00000578595 TP53TG3Q9ULZ0 132 aa13.78□□□□□ -0.2
SS18-209ENST00000578595 EPDR1Q9UM22 224 aa13.78□□□□□ -0.2
SS18-209ENST00000578595 A0A1W2PRE2 83 aa13.77□□□□□ -0.21
SS18-209ENST00000578595 NACAE9PAV3 2078 aa13.77□□□□□ -0.21
SS18-209ENST00000578595 SEC11BP0C7V7 166 aa13.77□□□□□ -0.21
SS18-209ENST00000578595 OR5I1Q13606 314 aa13.77□□□□□ -0.21
SS18-209ENST00000578595 ZFP69Q49AA0 526 aa13.77□□□□□ -0.21
SS18-209ENST00000578595 Q6ZTI0 123 aa13.77□□□□□ -0.21
SS18-209ENST00000578595 PRNTQ86SH4 94 aa13.77□□□□□ -0.21
SS18-209ENST00000578595 TRGV2A0A075B6R0 118 aa13.76□□□□□ -0.21
SS18-209ENST00000578595 P0DMU3 169 aa13.76□□□□□ -0.21
SS18-209ENST00000578595 FAM231AP0DMU4 169 aa13.76□□□□□ -0.21
SS18-209ENST00000578595 FAM231CP0DMU5 169 aa13.76□□□□□ -0.21
SS18-209ENST00000578595 TCL1AP56279 114 aa13.76□□□□□ -0.21
SS18-209ENST00000578595 TMEM183BQ1AE95 376 aa13.76□□□□□ -0.21
SS18-209ENST00000578595 Q6AWC8 147 aa13.76□□□□□ -0.21
SS18-209ENST00000578595 AKAP14Q86UN6 197 aa13.76□□□□□ -0.21
SS18-209ENST00000578595 TMEM183AQ8IXX5 376 aa13.76□□□□□ -0.21
SS18-209ENST00000578595 TCTE3Q8IZS6 198 aa13.76□□□□□ -0.21
SS18-209ENST00000578595 C11orf72Q8NBR9 251 aa13.76□□□□□ -0.21
SS18-209ENST00000578595 ATG101Q9BSB4 218 aa13.76□□□□□ -0.21
SS18-209ENST00000578595 PSG8Q9UQ74 426 aa13.76□□□□□ -0.21
SS18-209ENST00000578595 KLF12Q9Y4X4 402 aa13.76□□□□□ -0.21
SS18-209ENST00000578595 MUC4Q99102 2169 aa13.76□□□□□ -0.21
SS18-209ENST00000578595 TRAV21A0A0B4J279 112 aa13.75□□□□□ -0.21
SS18-209ENST00000578595 UMAD1C9J7I0 102 aa13.75□□□□□ -0.21
SS18-209ENST00000578595 NUDT3O95989 172 aa13.75□□□□□ -0.21
SS18-209ENST00000578595 FLI1Q01543 452 aaPredicted RBP13.75□□□□□ -0.21
SS18-209ENST00000578595 DAZ2Q13117 558 aaKnown RBP13.75□□□□□ -0.21
SS18-209ENST00000578595 IBA57Q5T440 356 aaKnown RBP13.75□□□□□ -0.21
SS18-209ENST00000578595 CST9LP1Q5W188 147 aa13.75□□□□□ -0.21
SS18-209ENST00000578595 HYDINQ4G0P3 5121 aa13.75□□□□□ -0.21
SS18-209ENST00000578595 TRGV11A0A075B6L2 103 aa13.74□□□□□ -0.21
SS18-209ENST00000578595 PPT1P50897 306 aa13.74□□□□□ -0.21
SS18-209ENST00000578595 C15orf53Q8NAA6 179 aa13.74□□□□□ -0.21
SS18-209ENST00000578595 SFT2D1Q8WV19 159 aa13.74□□□□□ -0.21
SS18-209ENST00000578595 C8orf49Q96NF6 230 aa13.74□□□□□ -0.21
SS18-209ENST00000578595 MRPL16Q9NX20 251 aaKnown RBP13.74□□□□□ -0.21
SS18-209ENST00000578595 FAM74A7A6NL05 159 aa13.73□□□□□ -0.21
SS18-209ENST00000578595 PEX7O00628 323 aa13.73□□□□□ -0.21
SS18-209ENST00000578595 TMEM75Q8N9X5 138 aa13.73□□□□□ -0.21
SS18-209ENST00000578595 TVP23CQ96ET8 276 aa13.73□□□□□ -0.21
SS18-209ENST00000578595 TRAV34A0A0B4J273 112 aa13.72□□□□□ -0.21
SS18-209ENST00000578595 GCGP01275 180 aa13.72□□□□□ -0.21
SS18-209ENST00000578595 C1QBP02746 253 aa13.72□□□□□ -0.21
SS18-209ENST00000578595 LINC00612Q8N6U2 182 aa13.72□□□□□ -0.21
SS18-209ENST00000578595 NKX6-2Q9C056 277 aaPredicted RBP13.72□□□□□ -0.21
SS18-209ENST00000578595 A0A0J9YY99 117 aa13.71□□□□□ -0.21
SS18-209ENST00000578595 FBLL1A6NHQ2 334 aaKnown RBP13.71□□□□□ -0.21
SS18-209ENST00000578595 H2AFB1P0C5Y9 115 aa13.71□□□□□ -0.21
SS18-209ENST00000578595 UBE2G1P62253 170 aa13.71□□□□□ -0.21
SS18-209ENST00000578595 LGALSLQ3ZCW2 172 aaPredicted RBP13.71□□□□□ -0.21
SS18-209ENST00000578595 SMUG1Q53HV7 270 aa13.71□□□□□ -0.21
SS18-209ENST00000578595 LINC00479Q96M42 142 aa13.71□□□□□ -0.21
SS18-209ENST00000578595 SDF2L1Q9HCN8 221 aa13.71□□□□□ -0.21
SS18-209ENST00000578595 MDFICQ9P1T7 246 aa13.71□□□□□ -0.21
SS18-209ENST00000578595 IGHV3-53P01767 116 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms