RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 KANTRA0A1W2PQU2 76 aa11.35□□□□□ -0.59
VAPA-204ENST00000577901 DAD1P61803 113 aa11.35□□□□□ -0.59
VAPA-204ENST00000577901 TMEM263Q8WUH6 116 aaKnown RBP11.35□□□□□ -0.59
VAPA-204ENST00000577901 CTXND1A0A1B0GTU2 59 aa11.34□□□□□ -0.59
VAPA-204ENST00000577901 CD300CQ08708 224 aa11.34□□□□□ -0.59
VAPA-204ENST00000577901 BTN1A1Q13410 526 aa11.34□□□□□ -0.59
VAPA-204ENST00000577901 IQCF2Q8IXL9 164 aa11.34□□□□□ -0.59
VAPA-204ENST00000577901 SUN5Q8TC36 379 aa11.34□□□□□ -0.59
VAPA-204ENST00000577901 ST6GAL2Q96JF0 529 aa11.34□□□□□ -0.59
VAPA-204ENST00000577901 RPH3ALQ9UNE2 315 aa11.34□□□□□ -0.59
VAPA-204ENST00000577901 TIMM8BQ9Y5J9 83 aaPredicted RBP11.34□□□□□ -0.59
VAPA-204ENST00000577901 PLAC8L1A1L4L8 177 aa11.33□□□□□ -0.6
VAPA-204ENST00000577901 ZNF324O75467 553 aaPredicted RBP11.33□□□□□ -0.6
VAPA-204ENST00000577901 Q6ZNX1 250 aa11.33□□□□□ -0.6
VAPA-204ENST00000577901 UBE2DNLQ8IWF7 75 aa11.33□□□□□ -0.6
VAPA-204ENST00000577901 ZFAND2AQ8N6M9 145 aa11.33□□□□□ -0.6
VAPA-204ENST00000577901 RNASE8Q8TDE3 154 aaKnown RBP11.33□□□□□ -0.6
VAPA-204ENST00000577901 TMED6Q8WW62 240 aa11.33□□□□□ -0.6
VAPA-204ENST00000577901 LENEPQ9Y5L5 61 aa11.33□□□□□ -0.6
VAPA-204ENST00000577901 IGLV2-18A0A075B6J9 118 aa11.32□□□□□ -0.6
VAPA-204ENST00000577901 BCL2L11O43521 198 aa11.32□□□□□ -0.6
VAPA-204ENST00000577901 PFDN1O60925 122 aa11.32□□□□□ -0.6
VAPA-204ENST00000577901 DEFB130BP0DP73 79 aa11.32□□□□□ -0.6
VAPA-204ENST00000577901 DEFB130AP0DP74 79 aa11.32□□□□□ -0.6
VAPA-204ENST00000577901 EIF5AP63241 154 aaKnown RBP11.32□□□□□ -0.6
VAPA-204ENST00000577901 GOLT1AQ6ZVE7 132 aa11.32□□□□□ -0.6
VAPA-204ENST00000577901 Q8TAT8 98 aa11.32□□□□□ -0.6
VAPA-204ENST00000577901 FAM210BQ96KR6 192 aa11.32□□□□□ -0.6
VAPA-204ENST00000577901 ZNF471Q9BX82 626 aaPredicted RBP11.32□□□□□ -0.6
VAPA-204ENST00000577901 SERTM2A0A1B0GWG4 89 aa11.31□□□□□ -0.6
VAPA-204ENST00000577901 CBY3A6NI87 242 aa11.31□□□□□ -0.6
VAPA-204ENST00000577901 SNURFLB1AK76 121 aa11.31□□□□□ -0.6
VAPA-204ENST00000577901 K7EQM0 130 aa11.31□□□□□ -0.6
VAPA-204ENST00000577901 HTN3P15516 51 aa11.31□□□□□ -0.6
VAPA-204ENST00000577901 ZNF726P1Q15940 193 aa11.31□□□□□ -0.6
VAPA-204ENST00000577901 SSX7Q7RTT5 188 aa11.31□□□□□ -0.6
VAPA-204ENST00000577901 C5orf17Q8NAS9 161 aa11.31□□□□□ -0.6
VAPA-204ENST00000577901 LINC00467Q9BRT7 94 aa11.31□□□□□ -0.6
VAPA-204ENST00000577901 NOP10Q9NPE3 64 aaKnown RBP11.31□□□□□ -0.6
VAPA-204ENST00000577901 RGS13O14921 159 aa11.3□□□□□ -0.6
VAPA-204ENST00000577901 SEC11BP0C7V7 166 aa11.3□□□□□ -0.6
VAPA-204ENST00000577901 SUMO1P63165 101 aaKnown RBP11.3□□□□□ -0.6
VAPA-204ENST00000577901 Q6ZR54 194 aa11.3□□□□□ -0.6
VAPA-204ENST00000577901 TMUB2Q71RG4 321 aa11.3□□□□□ -0.6
VAPA-204ENST00000577901 TCTE3Q8IZS6 198 aa11.3□□□□□ -0.6
VAPA-204ENST00000577901 EIF4E3Q8N5X7 224 aaKnown RBP11.3□□□□□ -0.6
VAPA-204ENST00000577901 ZNF680Q8NEM1 530 aa11.3□□□□□ -0.6
VAPA-204ENST00000577901 STOML3Q8TAV4 291 aa11.3□□□□□ -0.6
VAPA-204ENST00000577901 A0A1W2PRE2 83 aa11.29□□□□□ -0.6
VAPA-204ENST00000577901 UMAD1C9J7I0 102 aa11.29□□□□□ -0.6
VAPA-204ENST00000577901 GNG5P63218 68 aa11.29□□□□□ -0.6
VAPA-204ENST00000577901 ANXA2RQ3ZCQ2 193 aa11.29□□□□□ -0.6
VAPA-204ENST00000577901 PRR9Q5T870 116 aa11.29□□□□□ -0.6
VAPA-204ENST00000577901 NKX6-2Q9C056 277 aaPredicted RBP11.29□□□□□ -0.6
VAPA-204ENST00000577901 HSPG2P98160 4391 aa11.28□□□□□ -0.6
VAPA-204ENST00000577901 IGHV1OR15-1A0A075B7D0 117 aa11.28□□□□□ -0.6
VAPA-204ENST00000577901 MAP1LC3B2A6NCE7 125 aa11.28□□□□□ -0.6
VAPA-204ENST00000577901 TCRAP04437 139 aa11.28□□□□□ -0.6
VAPA-204ENST00000577901 FGF8P55075 233 aaPredicted RBP11.28□□□□□ -0.6
VAPA-204ENST00000577901 SOHLH1Q5JUK2 328 aa11.28□□□□□ -0.6
VAPA-204ENST00000577901 NDFIP1Q9BT67 221 aa11.28□□□□□ -0.6
VAPA-204ENST00000577901 MAP1LC3BQ9GZQ8 125 aa11.28□□□□□ -0.6
VAPA-204ENST00000577901 EPDR1Q9UM22 224 aa11.28□□□□□ -0.6
VAPA-204ENST00000577901 ATP5G1P05496 136 aa11.27□□□□□ -0.61
VAPA-204ENST00000577901 TPT1P13693 172 aaKnown RBP11.27□□□□□ -0.61
VAPA-204ENST00000577901 ATP5G3P48201 142 aa11.27□□□□□ -0.61
VAPA-204ENST00000577901 DAZ2Q13117 558 aaKnown RBP11.27□□□□□ -0.61
VAPA-204ENST00000577901 RNF212Q495C1 297 aa11.27□□□□□ -0.61
VAPA-204ENST00000577901 ZNF575Q86XF7 245 aa11.27□□□□□ -0.61
VAPA-204ENST00000577901 TMPRSS5Q9H3S3 457 aa11.27□□□□□ -0.61
VAPA-204ENST00000577901 TREM1Q9NP99 234 aa11.27□□□□□ -0.61
VAPA-204ENST00000577901 TRAV8-1A0A0A6YYK1 113 aa11.26□□□□□ -0.61
VAPA-204ENST00000577901 FBLL1A6NHQ2 334 aaKnown RBP11.26□□□□□ -0.61
VAPA-204ENST00000577901 GGTLC3B5MD39 225 aa11.26□□□□□ -0.61
VAPA-204ENST00000577901 IFNA7P01567 189 aa11.26□□□□□ -0.61
VAPA-204ENST00000577901 UBE2G2P60604 165 aa11.26□□□□□ -0.61
VAPA-204ENST00000577901 Q6AWC8 147 aa11.26□□□□□ -0.61
VAPA-204ENST00000577901 FAM159AQ6UWV7 190 aa11.26□□□□□ -0.61
VAPA-204ENST00000577901 DPPA3Q6W0C5 159 aa11.26□□□□□ -0.61
VAPA-204ENST00000577901 CYB561D1Q8N8Q1 229 aa11.26□□□□□ -0.61
VAPA-204ENST00000577901 ATG101Q9BSB4 218 aa11.26□□□□□ -0.61
VAPA-204ENST00000577901 GSN-AS1Q9NRJ2 163 aa11.26□□□□□ -0.61
VAPA-204ENST00000577901 hCG_2014768A0A024R1R8 64 aa11.25□□□□□ -0.61
VAPA-204ENST00000577901 F5H768 121 aa11.25□□□□□ -0.61
VAPA-204ENST00000577901 C1QBP02746 253 aa11.25□□□□□ -0.61
VAPA-204ENST00000577901 FHITP49789 147 aa11.25□□□□□ -0.61
VAPA-204ENST00000577901 LGALSLQ3ZCW2 172 aaPredicted RBP11.25□□□□□ -0.61
VAPA-204ENST00000577901 IBA57Q5T440 356 aaKnown RBP11.25□□□□□ -0.61
VAPA-204ENST00000577901 C1orf134Q5TEV5 83 aa11.25□□□□□ -0.61
VAPA-204ENST00000577901 EIF5AL1Q6IS14 154 aaKnown RBP11.25□□□□□ -0.61
VAPA-204ENST00000577901 Q6ZQT7 251 aa11.25□□□□□ -0.61
VAPA-204ENST00000577901 AKAP14Q86UN6 197 aa11.25□□□□□ -0.61
VAPA-204ENST00000577901 C11orf72Q8NBR9 251 aa11.25□□□□□ -0.61
VAPA-204ENST00000577901 FAM213BQ8TBF2 198 aa11.25□□□□□ -0.61
VAPA-204ENST00000577901 SGK494Q96LW2 274 aa11.25□□□□□ -0.61
VAPA-204ENST00000577901 KRTAP4-5Q9BYR2 181 aa11.25□□□□□ -0.61
VAPA-204ENST00000577901 PSG8Q9UQ74 426 aa11.25□□□□□ -0.61
VAPA-204ENST00000577901 TRAV21A0A0B4J279 112 aa11.24□□□□□ -0.61
VAPA-204ENST00000577901 GAGE12BA1L429 117 aa11.24□□□□□ -0.61
VAPA-204ENST00000577901 GAGE7O76087 117 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms