RNA–Protein interactions for RNA: ENST00000575639.1

TRAPPC1-207, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-207ENST00000575639 NDFIP1Q9BT67 221 aa10.71□□□□□ -0.69
TRAPPC1-207ENST00000575639 TIMM8BQ9Y5J9 83 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC1-207ENST00000575639 DYNC2H1Q8NCM8 4307 aaKnown RBP10.7□□□□□ -0.7
TRAPPC1-207ENST00000575639 TENM2Q9NT68 2774 aa10.7□□□□□ -0.7
TRAPPC1-207ENST00000575639 A0A1B0GVG6 124 aa10.7□□□□□ -0.7
TRAPPC1-207ENST00000575639 FBLL1A6NHQ2 334 aaKnown RBP10.7□□□□□ -0.7
TRAPPC1-207ENST00000575639 RGS13O14921 159 aa10.7□□□□□ -0.7
TRAPPC1-207ENST00000575639 DAD1P61803 113 aa10.7□□□□□ -0.7
TRAPPC1-207ENST00000575639 ZNF767PQ75MW2 155 aa10.7□□□□□ -0.7
TRAPPC1-207ENST00000575639 CYB561D1Q8N8Q1 229 aa10.7□□□□□ -0.7
TRAPPC1-207ENST00000575639 RNASE8Q8TDE3 154 aaKnown RBP10.7□□□□□ -0.7
TRAPPC1-207ENST00000575639 LINC00467Q9BRT7 94 aa10.7□□□□□ -0.7
TRAPPC1-207ENST00000575639 ATG101Q9BSB4 218 aa10.7□□□□□ -0.7
TRAPPC1-207ENST00000575639 PLA2G2EQ9NZK7 142 aa10.7□□□□□ -0.7
TRAPPC1-207ENST00000575639 DEFB131BA0A096LNP1 70 aa10.69□□□□□ -0.7
TRAPPC1-207ENST00000575639 TRAV8-1A0A0A6YYK1 113 aa10.69□□□□□ -0.7
TRAPPC1-207ENST00000575639 CBY3A6NI87 242 aa10.69□□□□□ -0.7
TRAPPC1-207ENST00000575639 FAM74A7A6NL05 159 aa10.69□□□□□ -0.7
TRAPPC1-207ENST00000575639 PPT1P50897 306 aa10.69□□□□□ -0.7
TRAPPC1-207ENST00000575639 CST9LP1Q5W188 147 aa10.69□□□□□ -0.7
TRAPPC1-207ENST00000575639 EIF4E3Q8N5X7 224 aaKnown RBP10.69□□□□□ -0.7
TRAPPC1-207ENST00000575639 ZNF680Q8NEM1 530 aa10.69□□□□□ -0.7
TRAPPC1-207ENST00000575639 TREM1Q9NP99 234 aa10.69□□□□□ -0.7
TRAPPC1-207ENST00000575639 ARL2-SNX15V9GYD0 113 aa10.69□□□□□ -0.7
TRAPPC1-207ENST00000575639 SNURFLB1AK76 121 aa10.68□□□□□ -0.7
TRAPPC1-207ENST00000575639 IGLL5B9A064 214 aa10.68□□□□□ -0.7
TRAPPC1-207ENST00000575639 F6UZH7 168 aa10.68□□□□□ -0.7
TRAPPC1-207ENST00000575639 TEX46H3BTG2 121 aa10.68□□□□□ -0.7
TRAPPC1-207ENST00000575639 TCTAP57738 103 aa10.68□□□□□ -0.7
TRAPPC1-207ENST00000575639 ANXA2RQ3ZCQ2 193 aa10.68□□□□□ -0.7
TRAPPC1-207ENST00000575639 PRR9Q5T870 116 aa10.68□□□□□ -0.7
TRAPPC1-207ENST00000575639 C9orf62Q8N4C0 152 aa10.68□□□□□ -0.7
TRAPPC1-207ENST00000575639 HIST1H2BAQ96A08 127 aa10.68□□□□□ -0.7
TRAPPC1-207ENST00000575639 TCEAL7Q9BRU2 100 aa10.68□□□□□ -0.7
TRAPPC1-207ENST00000575639 NOP10Q9NPE3 64 aaKnown RBP10.68□□□□□ -0.7
TRAPPC1-207ENST00000575639 SACSQ9NZJ4 4579 aa10.68□□□□□ -0.7
TRAPPC1-207ENST00000575639 IGHV1OR15-1A0A075B7D0 117 aa10.67□□□□□ -0.7
TRAPPC1-207ENST00000575639 A0A1B0GV50 99 aa10.67□□□□□ -0.7
TRAPPC1-207ENST00000575639 PLAC8L1A1L4L8 177 aa10.67□□□□□ -0.7
TRAPPC1-207ENST00000575639 DEFB130BP0DP73 79 aa10.67□□□□□ -0.7
TRAPPC1-207ENST00000575639 DEFB130AP0DP74 79 aa10.67□□□□□ -0.7
TRAPPC1-207ENST00000575639 FLI1Q01543 452 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC1-207ENST00000575639 TMEM75Q8N9X5 138 aa10.67□□□□□ -0.7
TRAPPC1-207ENST00000575639 SGK494Q96LW2 274 aa10.67□□□□□ -0.7
TRAPPC1-207ENST00000575639 PSG8Q9UQ74 426 aa10.67□□□□□ -0.7
TRAPPC1-207ENST00000575639 CSMD3Q7Z407 3707 aa10.67□□□□□ -0.7
TRAPPC1-207ENST00000575639 HYDINQ4G0P3 5121 aa10.67□□□□□ -0.7
TRAPPC1-207ENST00000575639 TRAV21A0A0B4J279 112 aa10.66□□□□□ -0.7
TRAPPC1-207ENST00000575639 LCE6AA0A183 80 aa10.66□□□□□ -0.7
TRAPPC1-207ENST00000575639 PEX7O00628 323 aa10.66□□□□□ -0.7
TRAPPC1-207ENST00000575639 SULT1A2P50226 295 aa10.66□□□□□ -0.7
TRAPPC1-207ENST00000575639 SAPCD1Q5SSQ6 148 aa10.66□□□□□ -0.7
TRAPPC1-207ENST00000575639 Q6AWC8 147 aa10.66□□□□□ -0.7
TRAPPC1-207ENST00000575639 FAM159AQ6UWV7 190 aa10.66□□□□□ -0.7
TRAPPC1-207ENST00000575639 PRNTQ86SH4 94 aa10.66□□□□□ -0.7
TRAPPC1-207ENST00000575639 STARD9Q9P2P6 4700 aa10.66□□□□□ -0.7
TRAPPC1-207ENST00000575639 TRAV1-1A0A0B4J248 108 aa10.65□□□□□ -0.7
TRAPPC1-207ENST00000575639 PAGE4O60829 102 aa10.65□□□□□ -0.7
TRAPPC1-207ENST00000575639 HTN3P15516 51 aa10.65□□□□□ -0.7
TRAPPC1-207ENST00000575639 DAZ2Q13117 558 aaKnown RBP10.65□□□□□ -0.7
TRAPPC1-207ENST00000575639 TVP23CQ96ET8 276 aa10.65□□□□□ -0.7
TRAPPC1-207ENST00000575639 FAM210BQ96KR6 192 aa10.65□□□□□ -0.7
TRAPPC1-207ENST00000575639 IGLV2-11P01706 119 aa10.64□□□□□ -0.71
TRAPPC1-207ENST00000575639 SMUG1Q53HV7 270 aa10.64□□□□□ -0.71
TRAPPC1-207ENST00000575639 IBA57Q5T440 356 aaKnown RBP10.64□□□□□ -0.71
TRAPPC1-207ENST00000575639 GSN-AS1Q9NRJ2 163 aa10.64□□□□□ -0.71
TRAPPC1-207ENST00000575639 TRGV11A0A075B6L2 103 aa10.63□□□□□ -0.71
TRAPPC1-207ENST00000575639 IGHV4-4A0A075B6R2 117 aa10.63□□□□□ -0.71
TRAPPC1-207ENST00000575639 TRAV34A0A0B4J273 112 aa10.63□□□□□ -0.71
TRAPPC1-207ENST00000575639 ATP5G1P05496 136 aa10.63□□□□□ -0.71
TRAPPC1-207ENST00000575639 ATP5G3P48201 142 aa10.63□□□□□ -0.71
TRAPPC1-207ENST00000575639 UBE2G1P62253 170 aa10.63□□□□□ -0.71
TRAPPC1-207ENST00000575639 MUC21Q5SSG8 566 aa10.63□□□□□ -0.71
TRAPPC1-207ENST00000575639 Q6ZQT7 251 aa10.63□□□□□ -0.71
TRAPPC1-207ENST00000575639 LINC00479Q96M42 142 aa10.63□□□□□ -0.71
TRAPPC1-207ENST00000575639 NDUFAF3Q9BU61 184 aa10.63□□□□□ -0.71
TRAPPC1-207ENST00000575639 NAGKQ9UJ70 344 aa10.63□□□□□ -0.71
TRAPPC1-207ENST00000575639 DNAH1Q9P2D7 4330 aa10.62□□□□□ -0.71
TRAPPC1-207ENST00000575639 GCGP01275 180 aa10.62□□□□□ -0.71
TRAPPC1-207ENST00000575639 TCL1AP56279 114 aa10.62□□□□□ -0.71
TRAPPC1-207ENST00000575639 ZNF415Q09FC8 603 aa10.62□□□□□ -0.71
TRAPPC1-207ENST00000575639 C11orf72Q8NBR9 251 aa10.62□□□□□ -0.71
TRAPPC1-207ENST00000575639 FMC1Q96HJ9 113 aa10.62□□□□□ -0.71
TRAPPC1-207ENST00000575639 KCNS1Q96KK3 526 aa10.62□□□□□ -0.71
TRAPPC1-207ENST00000575639 MANBALQ9NQG1 85 aa10.62□□□□□ -0.71
TRAPPC1-207ENST00000575639 ZFP30Q9Y2G7 519 aa10.62□□□□□ -0.71
TRAPPC1-207ENST00000575639 GAGE12BA1L429 117 aa10.61□□□□□ -0.71
TRAPPC1-207ENST00000575639 GAGE7O76087 117 aa10.61□□□□□ -0.71
TRAPPC1-207ENST00000575639 S100A9P06702 114 aaKnown RBP10.61□□□□□ -0.71
TRAPPC1-207ENST00000575639 PFN1P07737 140 aaKnown RBP10.61□□□□□ -0.71
TRAPPC1-207ENST00000575639 GAGE12FP0CL80 117 aa10.61□□□□□ -0.71
TRAPPC1-207ENST00000575639 GAGE12GP0CL81 117 aa10.61□□□□□ -0.71
TRAPPC1-207ENST00000575639 GAGE12IP0CL82 117 aa10.61□□□□□ -0.71
TRAPPC1-207ENST00000575639 AKR1C3P42330 323 aa10.61□□□□□ -0.71
TRAPPC1-207ENST00000575639 NKX2-5P52952 324 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC1-207ENST00000575639 TMEM183BQ1AE95 376 aa10.61□□□□□ -0.71
TRAPPC1-207ENST00000575639 TDRG1Q3Y452 100 aa10.61□□□□□ -0.71
TRAPPC1-207ENST00000575639 TMEM183AQ8IXX5 376 aa10.61□□□□□ -0.71
TRAPPC1-207ENST00000575639 C8orf49Q96NF6 230 aa10.61□□□□□ -0.71
TRAPPC1-207ENST00000575639 SDF2L1Q9HCN8 221 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms