RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 H2AFB1P0C5Y9 115 aa9.66□□□□□ -0.86
CIITA-210ENST00000575513 HTN1P15515 57 aa9.66□□□□□ -0.86
CIITA-210ENST00000575513 FGF8P55075 233 aaPredicted RBP9.66□□□□□ -0.86
CIITA-210ENST00000575513 DAD1P61803 113 aa9.66□□□□□ -0.86
CIITA-210ENST00000575513 IQCF2Q8IXL9 164 aa9.66□□□□□ -0.86
CIITA-210ENST00000575513 ZFAND2AQ8N6M9 145 aa9.66□□□□□ -0.86
CIITA-210ENST00000575513 SFT2D1Q8WV19 159 aa9.66□□□□□ -0.86
CIITA-210ENST00000575513 NKX6-2Q9C056 277 aaPredicted RBP9.66□□□□□ -0.86
CIITA-210ENST00000575513 TMPRSS5Q9H3S3 457 aa9.66□□□□□ -0.86
CIITA-210ENST00000575513 APLNQ9ULZ1 77 aa9.66□□□□□ -0.86
CIITA-210ENST00000575513 ARL2-SNX15V9GYD0 113 aa9.66□□□□□ -0.86
CIITA-210ENST00000575513 SERTM2A0A1B0GWG4 89 aa9.65□□□□□ -0.86
CIITA-210ENST00000575513 GGTLC3B5MD39 225 aa9.65□□□□□ -0.86
CIITA-210ENST00000575513 RNASE4P34096 147 aaKnown RBP9.65□□□□□ -0.86
CIITA-210ENST00000575513 ZNF767PQ75MW2 155 aa9.65□□□□□ -0.86
CIITA-210ENST00000575513 IGHV4-4A0A075B6R2 117 aa9.64□□□□□ -0.87
CIITA-210ENST00000575513 FAM74A7A6NL05 159 aa9.64□□□□□ -0.87
CIITA-210ENST00000575513 J3KRW8 73 aa9.64□□□□□ -0.87
CIITA-210ENST00000575513 LY6G6CO95867 125 aa9.64□□□□□ -0.87
CIITA-210ENST00000575513 SUMO1P63165 101 aaKnown RBP9.64□□□□□ -0.87
CIITA-210ENST00000575513 ANXA2RQ3ZCQ2 193 aa9.64□□□□□ -0.87
CIITA-210ENST00000575513 ZNF680Q8NEM1 530 aa9.64□□□□□ -0.87
CIITA-210ENST00000575513 CBY3A6NI87 242 aa9.63□□□□□ -0.87
CIITA-210ENST00000575513 TCRAP04437 139 aa9.63□□□□□ -0.87
CIITA-210ENST00000575513 PPT1P50897 306 aa9.63□□□□□ -0.87
CIITA-210ENST00000575513 DAZ2Q13117 558 aaKnown RBP9.63□□□□□ -0.87
CIITA-210ENST00000575513 BTN1A1Q13410 526 aa9.63□□□□□ -0.87
CIITA-210ENST00000575513 GOLT1AQ6ZVE7 132 aa9.63□□□□□ -0.87
CIITA-210ENST00000575513 EIF4E3Q8N5X7 224 aaKnown RBP9.63□□□□□ -0.87
CIITA-210ENST00000575513 NDUFAF3Q9BU61 184 aa9.63□□□□□ -0.87
CIITA-210ENST00000575513 EPDR1Q9UM22 224 aa9.63□□□□□ -0.87
CIITA-210ENST00000575513 BOLA1Q9Y3E2 137 aa9.63□□□□□ -0.87
CIITA-210ENST00000575513 FBLL1A6NHQ2 334 aaKnown RBP9.62□□□□□ -0.87
CIITA-210ENST00000575513 SNURFLB1AK76 121 aa9.62□□□□□ -0.87
CIITA-210ENST00000575513 K7EQM0 130 aa9.62□□□□□ -0.87
CIITA-210ENST00000575513 UBE2G2P60604 165 aa9.62□□□□□ -0.87
CIITA-210ENST00000575513 GNG5P63218 68 aa9.62□□□□□ -0.87
CIITA-210ENST00000575513 Q6AWC8 147 aa9.62□□□□□ -0.87
CIITA-210ENST00000575513 LINC00612Q8N6U2 182 aa9.62□□□□□ -0.87
CIITA-210ENST00000575513 Q8TAT8 98 aa9.62□□□□□ -0.87
CIITA-210ENST00000575513 TCEAL7Q9BRU2 100 aa9.62□□□□□ -0.87
CIITA-210ENST00000575513 NOP10Q9NPE3 64 aaKnown RBP9.62□□□□□ -0.87
CIITA-210ENST00000575513 TEX46H3BTG2 121 aa9.61□□□□□ -0.87
CIITA-210ENST00000575513 DEFB130BP0DP73 79 aa9.61□□□□□ -0.87
CIITA-210ENST00000575513 DEFB130AP0DP74 79 aa9.61□□□□□ -0.87
CIITA-210ENST00000575513 IBA57Q5T440 356 aaKnown RBP9.61□□□□□ -0.87
CIITA-210ENST00000575513 PRR9Q5T870 116 aa9.61□□□□□ -0.87
CIITA-210ENST00000575513 CYB561D1Q8N8Q1 229 aa9.61□□□□□ -0.87
CIITA-210ENST00000575513 HIST1H2BAQ96A08 127 aa9.61□□□□□ -0.87
CIITA-210ENST00000575513 ATG101Q9BSB4 218 aa9.61□□□□□ -0.87
CIITA-210ENST00000575513 RPH3ALQ9UNE2 315 aa9.61□□□□□ -0.87
CIITA-210ENST00000575513 IGHV1OR15-1A0A075B7D0 117 aa9.6□□□□□ -0.87
CIITA-210ENST00000575513 RGS13O14921 159 aa9.6□□□□□ -0.87
CIITA-210ENST00000575513 PAGE4O60829 102 aa9.6□□□□□ -0.87
CIITA-210ENST00000575513 IFNA7P01567 189 aa9.6□□□□□ -0.87
CIITA-210ENST00000575513 ATP5G1P05496 136 aa9.6□□□□□ -0.87
CIITA-210ENST00000575513 ATP5G3P48201 142 aa9.6□□□□□ -0.87
CIITA-210ENST00000575513 ALKAL2Q6UX46 152 aa9.6□□□□□ -0.87
CIITA-210ENST00000575513 C11orf72Q8NBR9 251 aa9.6□□□□□ -0.87
CIITA-210ENST00000575513 HYDINQ4G0P3 5121 aa9.6□□□□□ -0.87
CIITA-210ENST00000575513 VPS13DQ5THJ4 4388 aa9.6□□□□□ -0.87
CIITA-210ENST00000575513 TRAV8-1A0A0A6YYK1 113 aa9.59□□□□□ -0.87
CIITA-210ENST00000575513 F6UZH7 168 aa9.59□□□□□ -0.87
CIITA-210ENST00000575513 IGLV2-11P01706 119 aa9.59□□□□□ -0.87
CIITA-210ENST00000575513 BLOC1S1P78537 153 aa9.59□□□□□ -0.87
CIITA-210ENST00000575513 CCL20P78556 96 aa9.59□□□□□ -0.87
CIITA-210ENST00000575513 CST9LP1Q5W188 147 aa9.59□□□□□ -0.87
CIITA-210ENST00000575513 TMEM75Q8N9X5 138 aa9.59□□□□□ -0.87
CIITA-210ENST00000575513 C18orf15Q96N68 181 aa9.59□□□□□ -0.87
CIITA-210ENST00000575513 TREM1Q9NP99 234 aa9.59□□□□□ -0.87
CIITA-210ENST00000575513 MANBALQ9NQG1 85 aa9.59□□□□□ -0.87
CIITA-210ENST00000575513 TP53TG3Q9ULZ0 132 aa9.59□□□□□ -0.87
CIITA-210ENST00000575513 KMT2AQ03164 3969 aa9.59□□□□□ -0.87
CIITA-210ENST00000575513 A0A1B0GV50 99 aa9.58□□□□□ -0.88
CIITA-210ENST00000575513 PEX7O00628 323 aa9.58□□□□□ -0.88
CIITA-210ENST00000575513 P0DMU3 169 aa9.58□□□□□ -0.88
CIITA-210ENST00000575513 FAM231AP0DMU4 169 aa9.58□□□□□ -0.88
CIITA-210ENST00000575513 FAM231CP0DMU5 169 aa9.58□□□□□ -0.88
CIITA-210ENST00000575513 HTN3P15516 51 aa9.58□□□□□ -0.88
CIITA-210ENST00000575513 TCL1AP56279 114 aa9.58□□□□□ -0.88
CIITA-210ENST00000575513 FLI1Q01543 452 aaPredicted RBP9.58□□□□□ -0.88
CIITA-210ENST00000575513 LGALS9BQ3B8N2 356 aa9.58□□□□□ -0.88
CIITA-210ENST00000575513 TDRG1Q3Y452 100 aa9.58□□□□□ -0.88
CIITA-210ENST00000575513 C15orf53Q8NAA6 179 aa9.58□□□□□ -0.88
CIITA-210ENST00000575513 NDFIP1Q9BT67 221 aa9.58□□□□□ -0.88
CIITA-210ENST00000575513 GSN-AS1Q9NRJ2 163 aa9.58□□□□□ -0.88
CIITA-210ENST00000575513 PSG8Q9UQ74 426 aa9.58□□□□□ -0.88
CIITA-210ENST00000575513 TRAV21A0A0B4J279 112 aa9.57□□□□□ -0.88
CIITA-210ENST00000575513 SAPCD1Q5SSQ6 148 aa9.57□□□□□ -0.88
CIITA-210ENST00000575513 FAM159AQ6UWV7 190 aa9.57□□□□□ -0.88
CIITA-210ENST00000575513 TVP23CQ96ET8 276 aa9.57□□□□□ -0.88
CIITA-210ENST00000575513 TXNDC17Q9BRA2 123 aa9.57□□□□□ -0.88
CIITA-210ENST00000575513 KLF12Q9Y4X4 402 aa9.57□□□□□ -0.88
CIITA-210ENST00000575513 TRBV6-1A0A0K0K1D8 114 aa9.56□□□□□ -0.88
CIITA-210ENST00000575513 F5H768 121 aa9.56□□□□□ -0.88
CIITA-210ENST00000575513 SPINK4O60575 86 aa9.56□□□□□ -0.88
CIITA-210ENST00000575513 TAGLN2P37802 199 aaKnown RBP9.56□□□□□ -0.88
CIITA-210ENST00000575513 TMEM88Q6PEY1 159 aa9.56□□□□□ -0.88
CIITA-210ENST00000575513 Q6ZQT7 251 aa9.56□□□□□ -0.88
CIITA-210ENST00000575513 LYPD6BQ8NI32 183 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms