RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, human

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD3-217	ENST00000574022	WHAMMP3	Q1A5X7	153 aa		0.97	□□□□□ -2.25
CHD3-217	ENST00000574022	CCSMST1	Q4G0I0	132 aa		0.97	□□□□□ -2.25
CHD3-217	ENST00000574022	KRTAP26-1	Q6PEX3	210 aa		0.97	□□□□□ -2.25
CHD3-217	ENST00000574022		Q8N2B8	174 aa		0.97	□□□□□ -2.25
CHD3-217	ENST00000574022	OR10AG1	Q8NH19	301 aa		0.97	□□□□□ -2.25
CHD3-217	ENST00000574022	TMEM203	Q969S6	136 aa		0.97	□□□□□ -2.25
CHD3-217	ENST00000574022	NAA38	Q9BRA0	125 aa	Known RBP	0.97	□□□□□ -2.25
CHD3-217	ENST00000574022	LCE3D	Q9BYE3	92 aa		0.97	□□□□□ -2.25
CHD3-217	ENST00000574022	CCDC167	Q9P0B6	97 aa		0.97	□□□□□ -2.25
CHD3-217	ENST00000574022	FAM135A	Q9P2D6	1515 aa		0.97	□□□□□ -2.25
CHD3-217	ENST00000574022	KIDINS220	Q9ULH0	1771 aa		0.97	□□□□□ -2.25
CHD3-217	ENST00000574022	UHRF1BP1L	A0JNW5	1464 aa		0.97	□□□□□ -2.25
CHD3-217	ENST00000574022	BCL9L	Q86UU0	1499 aa		0.97	□□□□□ -2.25
CHD3-217	ENST00000574022	CECR2	Q9BXF3	1484 aa		0.97	□□□□□ -2.25
CHD3-217	ENST00000574022	MYH7	P12883	1935 aa		0.97	□□□□□ -2.25
CHD3-217	ENST00000574022	CEP192	Q8TEP8	1941 aa		0.97	□□□□□ -2.25
CHD3-217	ENST00000574022	NAIP	Q13075	1403 aa		0.97	□□□□□ -2.25
CHD3-217	ENST00000574022	GBF1	Q92538	1859 aa		0.97	□□□□□ -2.25
CHD3-217	ENST00000574022	MYH6	P13533	1939 aa		0.96	□□□□□ -2.26
CHD3-217	ENST00000574022	TRBV6-4	A0A1B0GX49	114 aa		0.96	□□□□□ -2.26
CHD3-217	ENST00000574022		H3BRM9	83 aa		0.96	□□□□□ -2.26
CHD3-217	ENST00000574022	APOD	P05090	189 aa		0.96	□□□□□ -2.26
CHD3-217	ENST00000574022	PYY	P10082	97 aa		0.96	□□□□□ -2.26
CHD3-217	ENST00000574022	S100A1	P23297	94 aa		0.96	□□□□□ -2.26
CHD3-217	ENST00000574022	SCIMP	Q6UWF3	145 aa		0.96	□□□□□ -2.26
CHD3-217	ENST00000574022	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	0.96	□□□□□ -2.26
CHD3-217	ENST00000574022	SNX29P2	Q8IUI4	249 aa		0.96	□□□□□ -2.26
CHD3-217	ENST00000574022	ATP6V0E2	Q8NHE4	81 aa		0.96	□□□□□ -2.26
CHD3-217	ENST00000574022	SDF2	Q99470	211 aa		0.96	□□□□□ -2.26
CHD3-217	ENST00000574022	PSMG3	Q9BT73	122 aa	Predicted RBP	0.96	□□□□□ -2.26
CHD3-217	ENST00000574022	SAR1A	Q9NR31	198 aa		0.96	□□□□□ -2.26
CHD3-217	ENST00000574022	CDC42SE1	Q9NRR8	79 aa		0.96	□□□□□ -2.26
CHD3-217	ENST00000574022	NOP16	Q9Y3C1	178 aa	Known RBP	0.96	□□□□□ -2.26
CHD3-217	ENST00000574022	MBD5	Q9P267	1494 aa		0.96	□□□□□ -2.26
CHD3-217	ENST00000574022	ERBIN	Q96RT1	1412 aa		0.96	□□□□□ -2.26
CHD3-217	ENST00000574022	ADGRB1	O14514	1584 aa		0.96	□□□□□ -2.26
CHD3-217	ENST00000574022	MYH13	Q9UKX3	1938 aa		0.95	□□□□□ -2.26
CHD3-217	ENST00000574022	ANK1	P16157	1881 aa		0.95	□□□□□ -2.26
CHD3-217	ENST00000574022	SI	P14410	1827 aa		0.95	□□□□□ -2.26
CHD3-217	ENST00000574022	KIF13A	Q9H1H9	1805 aa		0.95	□□□□□ -2.26
CHD3-217	ENST00000574022	MIF4GD	A9UHW6	222 aa	Known RBP	0.95	□□□□□ -2.26
CHD3-217	ENST00000574022		J3QLW9	94 aa		0.95	□□□□□ -2.26
CHD3-217	ENST00000574022		M0R2P5	195 aa		0.95	□□□□□ -2.26
CHD3-217	ENST00000574022	MRPS14	O60783	128 aa	Known RBP	0.95	□□□□□ -2.26
CHD3-217	ENST00000574022	IFNG	P01579	166 aa		0.95	□□□□□ -2.26
CHD3-217	ENST00000574022	ADCYAP1	P18509	176 aa		0.95	□□□□□ -2.26
CHD3-217	ENST00000574022	ATP11AUN	Q6ZP68	121 aa		0.95	□□□□□ -2.26
CHD3-217	ENST00000574022	IDO2	Q6ZQW0	420 aa		0.95	□□□□□ -2.26
CHD3-217	ENST00000574022		Q6ZUT4	128 aa		0.95	□□□□□ -2.26
CHD3-217	ENST00000574022	KCNRG	Q8N5I3	272 aa		0.95	□□□□□ -2.26
CHD3-217	ENST00000574022	TCTEX1D1	Q8N7M0	179 aa		0.95	□□□□□ -2.26
CHD3-217	ENST00000574022	C5orf17	Q8NAS9	161 aa		0.95	□□□□□ -2.26
CHD3-217	ENST00000574022	ZNF625	Q96I27	306 aa	Predicted RBP	0.95	□□□□□ -2.26
CHD3-217	ENST00000574022	PDCD10	Q9BUL8	212 aa		0.95	□□□□□ -2.26
CHD3-217	ENST00000574022	MED9	Q9NWA0	146 aa		0.95	□□□□□ -2.26
CHD3-217	ENST00000574022	TAS2R8	Q9NYW2	309 aa		0.95	□□□□□ -2.26
CHD3-217	ENST00000574022	GNG8	Q9UK08	70 aa		0.95	□□□□□ -2.26
CHD3-217	ENST00000574022	HELZ	P42694	1942 aa	Known RBP	0.95	□□□□□ -2.26
CHD3-217	ENST00000574022	VWDE	Q8N2E2	1590 aa		0.95	□□□□□ -2.26
CHD3-217	ENST00000574022	MDC1	Q14676	2089 aa	Known RBP	0.95	□□□□□ -2.26
CHD3-217	ENST00000574022	CUL7	Q14999	1698 aa		0.94	□□□□□ -2.26
CHD3-217	ENST00000574022	KIAA1549	Q9HCM3	1950 aa		0.94	□□□□□ -2.26
CHD3-217	ENST00000574022	ZNF518A	Q6AHZ1	1483 aa		0.94	□□□□□ -2.26
CHD3-217	ENST00000574022	LRP5	O75197	1615 aa		0.94	□□□□□ -2.26
CHD3-217	ENST00000574022	PTPRF	P10586	1907 aa		0.94	□□□□□ -2.26
CHD3-217	ENST00000574022	HEATR5B	Q9P2D3	2071 aa		0.94	□□□□□ -2.26
CHD3-217	ENST00000574022		A0A1W2PRS3	328 aa		0.94	□□□□□ -2.26
CHD3-217	ENST00000574022	GEMIN2	O14893	280 aa	Known RBP	0.94	□□□□□ -2.26
CHD3-217	ENST00000574022	NUPR1	O60356	82 aa		0.94	□□□□□ -2.26
CHD3-217	ENST00000574022	DNAL4	O96015	105 aa		0.94	□□□□□ -2.26
CHD3-217	ENST00000574022	FGF7	P21781	194 aa		0.94	□□□□□ -2.26
CHD3-217	ENST00000574022	S100P	P25815	95 aa		0.94	□□□□□ -2.26
CHD3-217	ENST00000574022	MPV17L	Q2QL34	196 aa		0.94	□□□□□ -2.26
CHD3-217	ENST00000574022	LINC01545	Q5VT33	79 aa		0.94	□□□□□ -2.26
CHD3-217	ENST00000574022	MIC13	Q5XKP0	118 aa		0.94	□□□□□ -2.26
CHD3-217	ENST00000574022	LINC00299	Q6ZSB3	139 aa		0.94	□□□□□ -2.26
CHD3-217	ENST00000574022	C3orf62	Q6ZUJ4	267 aa		0.94	□□□□□ -2.26
CHD3-217	ENST00000574022	C15orf53	Q8NAA6	179 aa		0.94	□□□□□ -2.26
CHD3-217	ENST00000574022	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	0.94	□□□□□ -2.26
CHD3-217	ENST00000574022	VSTM2A	Q8TAG5	236 aa		0.94	□□□□□ -2.26
CHD3-217	ENST00000574022	ZCCHC13	Q8WW36	166 aa	Known RBP	0.94	□□□□□ -2.26
CHD3-217	ENST00000574022	COPS9	Q8WXC6	57 aa		0.94	□□□□□ -2.26
CHD3-217	ENST00000574022	TRPM7	Q96QT4	1865 aa		0.94	□□□□□ -2.26
CHD3-217	ENST00000574022	SCN3A	Q9NY46	2000 aa		0.94	□□□□□ -2.26
CHD3-217	ENST00000574022	PCDH15	Q96QU1	1955 aa		0.94	□□□□□ -2.26
CHD3-217	ENST00000574022	TRAV12-2	A0A075B6T6	113 aa		0.93	□□□□□ -2.26
CHD3-217	ENST00000574022	TRAV2	A0A0B4J234	112 aa		0.93	□□□□□ -2.26
CHD3-217	ENST00000574022	TRAV17	A0A0B4J275	112 aa		0.93	□□□□□ -2.26
CHD3-217	ENST00000574022		F6UZH7	168 aa		0.93	□□□□□ -2.26
CHD3-217	ENST00000574022	HCRT	O43612	131 aa		0.93	□□□□□ -2.26
CHD3-217	ENST00000574022	PPY	P01298	95 aa		0.93	□□□□□ -2.26
CHD3-217	ENST00000574022	IGHV3-33	P01772	117 aa		0.93	□□□□□ -2.26
CHD3-217	ENST00000574022	ZNF25	P17030	456 aa	Predicted RBP	0.93	□□□□□ -2.26
CHD3-217	ENST00000574022	MRPS10	P82664	201 aa	Known RBP	0.93	□□□□□ -2.26
CHD3-217	ENST00000574022	KRTAP13-4	Q3LI77	160 aa		0.93	□□□□□ -2.26
CHD3-217	ENST00000574022	OCIAD2	Q56VL3	154 aa		0.93	□□□□□ -2.26
CHD3-217	ENST00000574022	MEIG1	Q5JSS6	88 aa		0.93	□□□□□ -2.26
CHD3-217	ENST00000574022	UNQ5815/PRO19632	Q6UWF5	114 aa		0.93	□□□□□ -2.26
CHD3-217	ENST00000574022	SLC25A26	Q70HW3	274 aa		0.93	□□□□□ -2.26
CHD3-217	ENST00000574022	ZNF563	Q8TA94	476 aa		0.93	□□□□□ -2.26

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