RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 FAM231AP0DMU4 169 aa17.72■□□□□ 0.43
FANCA-228ENST00000567943 FAM231CP0DMU5 169 aa17.72■□□□□ 0.43
FANCA-228ENST00000567943 ATP5G3P48201 142 aa17.72■□□□□ 0.43
FANCA-228ENST00000567943 ZNF345Q14585 488 aa17.72■□□□□ 0.43
FANCA-228ENST00000567943 ZNF726P1Q15940 193 aa17.72■□□□□ 0.43
FANCA-228ENST00000567943 ST6GAL2Q96JF0 529 aa17.72■□□□□ 0.43
FANCA-228ENST00000567943 ARPC5LQ9BPX5 153 aa17.72■□□□□ 0.43
FANCA-228ENST00000567943 LENEPQ9Y5L5 61 aa17.72■□□□□ 0.43
FANCA-228ENST00000567943 CTXND1A0A1B0GTU2 59 aa17.71■□□□□ 0.43
FANCA-228ENST00000567943 HMSDA8MTL9 139 aa17.71■□□□□ 0.43
FANCA-228ENST00000567943 F5H768 121 aa17.71■□□□□ 0.43
FANCA-228ENST00000567943 ANXA2RQ3ZCQ2 193 aa17.71■□□□□ 0.43
FANCA-228ENST00000567943 ZNF680Q8NEM1 530 aa17.71■□□□□ 0.43
FANCA-228ENST00000567943 TMED6Q8WW62 240 aa17.71■□□□□ 0.43
FANCA-228ENST00000567943 GSN-AS1Q9NRJ2 163 aa17.71■□□□□ 0.43
FANCA-228ENST00000567943 NACAE9PAV3 2078 aa17.71■□□□□ 0.43
FANCA-228ENST00000567943 IGHV1OR15-1A0A075B7D0 117 aa17.7■□□□□ 0.42
FANCA-228ENST00000567943 C11orf72Q8NBR9 251 aa17.7■□□□□ 0.42
FANCA-228ENST00000567943 TRAV8-1A0A0A6YYK1 113 aa17.69■□□□□ 0.42
FANCA-228ENST00000567943 GAGE12BA1L429 117 aa17.69■□□□□ 0.42
FANCA-228ENST00000567943 GAGE7O76087 117 aa17.69■□□□□ 0.42
FANCA-228ENST00000567943 GAGE12FP0CL80 117 aa17.69■□□□□ 0.42
FANCA-228ENST00000567943 GAGE12GP0CL81 117 aa17.69■□□□□ 0.42
FANCA-228ENST00000567943 GAGE12IP0CL82 117 aa17.69■□□□□ 0.42
FANCA-228ENST00000567943 DAZ2Q13117 558 aaKnown RBP17.69■□□□□ 0.42
FANCA-228ENST00000567943 LINC00612Q8N6U2 182 aa17.69■□□□□ 0.42
FANCA-228ENST00000567943 C5orf17Q8NAS9 161 aa17.69■□□□□ 0.42
FANCA-228ENST00000567943 TP53TG3Q9ULZ0 132 aa17.69■□□□□ 0.42
FANCA-228ENST00000567943 SUMO1P63165 101 aaKnown RBP17.68■□□□□ 0.42
FANCA-228ENST00000567943 A0A0D9SG52 128 aa17.67■□□□□ 0.42
FANCA-228ENST00000567943 GGTLC3B5MD39 225 aa17.67■□□□□ 0.42
FANCA-228ENST00000567943 MUC21Q5SSG8 566 aa17.67■□□□□ 0.42
FANCA-228ENST00000567943 Q6ZTI0 123 aa17.67■□□□□ 0.42
FANCA-228ENST00000567943 SGK494Q96LW2 274 aa17.67■□□□□ 0.42
FANCA-228ENST00000567943 TMPRSS5Q9H3S3 457 aa17.67■□□□□ 0.42
FANCA-228ENST00000567943 TCRAP04437 139 aa17.66■□□□□ 0.42
FANCA-228ENST00000567943 FGF8P55075 233 aaPredicted RBP17.66■□□□□ 0.42
FANCA-228ENST00000567943 Q6AWC8 147 aa17.66■□□□□ 0.42
FANCA-228ENST00000567943 KLF12Q9Y4X4 402 aa17.66■□□□□ 0.42
FANCA-228ENST00000567943 SERTM2A0A1B0GWG4 89 aa17.65■□□□□ 0.42
FANCA-228ENST00000567943 KANTRA0A1W2PQU2 76 aa17.65■□□□□ 0.42
FANCA-228ENST00000567943 TCL1AP56279 114 aa17.65■□□□□ 0.42
FANCA-228ENST00000567943 IBA57Q5T440 356 aaKnown RBP17.65■□□□□ 0.42
FANCA-228ENST00000567943 C15orf53Q8NAA6 179 aa17.65■□□□□ 0.42
FANCA-228ENST00000567943 TVP23CQ96ET8 276 aa17.65■□□□□ 0.42
FANCA-228ENST00000567943 ZNF471Q9BX82 626 aaPredicted RBP17.65■□□□□ 0.42
FANCA-228ENST00000567943 TREM1Q9NP99 234 aa17.65■□□□□ 0.42
FANCA-228ENST00000567943 A0A1W2PRE2 83 aa17.64■□□□□ 0.41
FANCA-228ENST00000567943 F6UZH7 168 aa17.64■□□□□ 0.41
FANCA-228ENST00000567943 BCL2L11O43521 198 aa17.64■□□□□ 0.41
FANCA-228ENST00000567943 EPDR1Q9UM22 224 aa17.64■□□□□ 0.41
FANCA-228ENST00000567943 PKHD1P08F94 4074 aa17.63■□□□□ 0.41
FANCA-228ENST00000567943 MAP1LC3B2A6NCE7 125 aa17.63■□□□□ 0.41
FANCA-228ENST00000567943 K7EQM0 130 aa17.63■□□□□ 0.41
FANCA-228ENST00000567943 UBE2G2P60604 165 aa17.63■□□□□ 0.41
FANCA-228ENST00000567943 MAP1LC3BQ9GZQ8 125 aa17.63■□□□□ 0.41
FANCA-228ENST00000567943 PKD1P98161 4303 aa17.62■□□□□ 0.41
FANCA-228ENST00000567943 TRGV1A0A0A0MS02 117 aa17.62■□□□□ 0.41
FANCA-228ENST00000567943 OR5I1Q13606 314 aa17.62■□□□□ 0.41
FANCA-228ENST00000567943 UBE2DNLQ8IWF7 75 aa17.62■□□□□ 0.41
FANCA-228ENST00000567943 NDFIP1Q9BT67 221 aa17.62■□□□□ 0.41
FANCA-228ENST00000567943 NAGKQ9UJ70 344 aa17.62■□□□□ 0.41
FANCA-228ENST00000567943 SEC11BP0C7V7 166 aa17.61■□□□□ 0.41
FANCA-228ENST00000567943 FHITP49789 147 aa17.61■□□□□ 0.41
FANCA-228ENST00000567943 ZNF415Q09FC8 603 aa17.61■□□□□ 0.41
FANCA-228ENST00000567943 FAM159AQ6UWV7 190 aa17.61■□□□□ 0.41
FANCA-228ENST00000567943 Q6ZNX1 250 aa17.61■□□□□ 0.41
FANCA-228ENST00000567943 CYB561D1Q8N8Q1 229 aa17.61■□□□□ 0.41
FANCA-228ENST00000567943 PSG8Q9UQ74 426 aa17.61■□□□□ 0.41
FANCA-228ENST00000567943 TRGV2A0A075B6R0 118 aa17.6■□□□□ 0.41
FANCA-228ENST00000567943 M0R2N4 97 aa17.6■□□□□ 0.41
FANCA-228ENST00000567943 SPINK4O60575 86 aa17.6■□□□□ 0.41
FANCA-228ENST00000567943 PFDN1O60925 122 aa17.6■□□□□ 0.41
FANCA-228ENST00000567943 NUDT3O95989 172 aa17.6■□□□□ 0.41
FANCA-228ENST00000567943 HOXA5P20719 270 aa17.6■□□□□ 0.41
FANCA-228ENST00000567943 RNF212Q495C1 297 aa17.6■□□□□ 0.41
FANCA-228ENST00000567943 TMUB2Q71RG4 321 aa17.6■□□□□ 0.41
FANCA-228ENST00000567943 ATG101Q9BSB4 218 aa17.6■□□□□ 0.41
FANCA-228ENST00000567943 TRAV21A0A0B4J279 112 aa17.59■□□□□ 0.41
FANCA-228ENST00000567943 IFNA7P01567 189 aa17.59■□□□□ 0.41
FANCA-228ENST00000567943 IGLV2-11P01706 119 aa17.59■□□□□ 0.41
FANCA-228ENST00000567943 FLI1Q01543 452 aaPredicted RBP17.59■□□□□ 0.41
FANCA-228ENST00000567943 TMEM183BQ1AE95 376 aa17.59■□□□□ 0.41
FANCA-228ENST00000567943 TMEM183AQ8IXX5 376 aa17.59■□□□□ 0.41
FANCA-228ENST00000567943 MRPL16Q9NX20 251 aaKnown RBP17.59■□□□□ 0.41
FANCA-228ENST00000567943 MDFICQ9P1T7 246 aa17.59■□□□□ 0.41
FANCA-228ENST00000567943 FAM74A7A6NL05 159 aa17.58■□□□□ 0.4
FANCA-228ENST00000567943 PRNTQ86SH4 94 aa17.58■□□□□ 0.4
FANCA-228ENST00000567943 TMEM75Q8N9X5 138 aa17.58■□□□□ 0.4
FANCA-228ENST00000567943 STOML3Q8TAV4 291 aa17.58■□□□□ 0.4
FANCA-228ENST00000567943 C8orf49Q96NF6 230 aa17.58■□□□□ 0.4
FANCA-228ENST00000567943 TRGV11A0A075B6L2 103 aa17.57■□□□□ 0.4
FANCA-228ENST00000567943 TRAV26-1A0A087WT03 109 aa17.57■□□□□ 0.4
FANCA-228ENST00000567943 EIF5AP63241 154 aaKnown RBP17.57■□□□□ 0.4
FANCA-228ENST00000567943 TCTE3Q8IZS6 198 aa17.57■□□□□ 0.4
FANCA-228ENST00000567943 FAM213BQ8TBF2 198 aa17.57■□□□□ 0.4
FANCA-228ENST00000567943 C18orf15Q96N68 181 aa17.57■□□□□ 0.4
FANCA-228ENST00000567943 IGLV2-18A0A075B6J9 118 aa17.56■□□□□ 0.4
FANCA-228ENST00000567943 A0A0J9YY99 117 aa17.56■□□□□ 0.4
FANCA-228ENST00000567943 UMAD1C9J7I0 102 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms