RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 CDSNQ15517 529 aa4.6□□□□□ -1.67
SNRPA1-209ENST00000560307 ZNF672Q499Z4 452 aaPredicted RBP4.6□□□□□ -1.67
SNRPA1-209ENST00000560307 PRR30Q53SZ7 412 aaPredicted RBP4.6□□□□□ -1.67
SNRPA1-209ENST00000560307 PAPPA-AS1Q5QFB9 102 aa4.6□□□□□ -1.67
SNRPA1-209ENST00000560307 C10orf55Q5SWW7 151 aa4.6□□□□□ -1.67
SNRPA1-209ENST00000560307 MAPKAPK5-AS1Q8N8E1 139 aa4.6□□□□□ -1.67
SNRPA1-209ENST00000560307 IGFBPL1Q8WX77 278 aa4.6□□□□□ -1.67
SNRPA1-209ENST00000560307 CARD19Q96LW7 228 aa4.6□□□□□ -1.67
SNRPA1-209ENST00000560307 MRPL35Q9NZE8 188 aaKnown RBP4.6□□□□□ -1.67
SNRPA1-209ENST00000560307 PROCRQ9UNN8 238 aa4.6□□□□□ -1.67
SNRPA1-209ENST00000560307 SLC25A15Q9Y619 301 aa4.6□□□□□ -1.67
SNRPA1-209ENST00000560307 CHD9Q3L8U1 2897 aa4.6□□□□□ -1.67
SNRPA1-209ENST00000560307 CHD7Q9P2D1 2997 aa4.6□□□□□ -1.67
SNRPA1-209ENST00000560307 DOCK10Q96BY6 2186 aa4.6□□□□□ -1.67
SNRPA1-209ENST00000560307 CABIN1Q9Y6J0 2220 aa4.6□□□□□ -1.67
SNRPA1-209ENST00000560307 IGHV4-4A0A075B6R2 117 aa4.59□□□□□ -1.67
SNRPA1-209ENST00000560307 TRBV7-9A0A0J9YWB2 115 aa4.59□□□□□ -1.67
SNRPA1-209ENST00000560307 GAGE12JA6NER3 117 aa4.59□□□□□ -1.67
SNRPA1-209ENST00000560307 FABP5P3A8MUU1 101 aa4.59□□□□□ -1.67
SNRPA1-209ENST00000560307 SCGB2A1O75556 95 aa4.59□□□□□ -1.67
SNRPA1-209ENST00000560307 FCN3O75636 299 aa4.59□□□□□ -1.67
SNRPA1-209ENST00000560307 GAGE7O76087 117 aa4.59□□□□□ -1.67
SNRPA1-209ENST00000560307 LGALS1P09382 135 aaKnown RBP4.59□□□□□ -1.67
SNRPA1-209ENST00000560307 NHLRC4P0CG21 123 aaPredicted RBP4.59□□□□□ -1.67
SNRPA1-209ENST00000560307 GAGE12FP0CL80 117 aa4.59□□□□□ -1.67
SNRPA1-209ENST00000560307 GAGE12GP0CL81 117 aa4.59□□□□□ -1.67
SNRPA1-209ENST00000560307 GAGE12IP0CL82 117 aa4.59□□□□□ -1.67
SNRPA1-209ENST00000560307 TNFAIP6P98066 277 aaPredicted RBP4.59□□□□□ -1.67
SNRPA1-209ENST00000560307 GAGE4Q13068 117 aa4.59□□□□□ -1.67
SNRPA1-209ENST00000560307 ORMDL2Q53FV1 153 aa4.59□□□□□ -1.67
SNRPA1-209ENST00000560307 SUMO4Q6EEV6 95 aa4.59□□□□□ -1.67
SNRPA1-209ENST00000560307 AMTNQ6UX39 209 aa4.59□□□□□ -1.67
SNRPA1-209ENST00000560307 ASCL5Q7RTU5 278 aa4.59□□□□□ -1.67
SNRPA1-209ENST00000560307 NFE4Q86UQ8 179 aa4.59□□□□□ -1.67
SNRPA1-209ENST00000560307 ASCL2Q99929 193 aa4.59□□□□□ -1.67
SNRPA1-209ENST00000560307 PIMREGQ9BSJ6 248 aa4.59□□□□□ -1.67
SNRPA1-209ENST00000560307 TPPP3Q9BW30 176 aa4.59□□□□□ -1.67
SNRPA1-209ENST00000560307 SPANXCQ9NY87 97 aa4.59□□□□□ -1.67
SNRPA1-209ENST00000560307 FZR1Q9UM11 496 aa4.59□□□□□ -1.67
SNRPA1-209ENST00000560307 SELENOKQ9Y6D0 94 aa4.59□□□□□ -1.67
SNRPA1-209ENST00000560307 PRR14LQ5THK1 2151 aa4.58□□□□□ -1.68
SNRPA1-209ENST00000560307 IGHV1-69DA0A0B4J2H0 117 aa4.58□□□□□ -1.68
SNRPA1-209ENST00000560307 SMKR1H3BMG3 65 aa4.58□□□□□ -1.68
SNRPA1-209ENST00000560307 H3BTX0 84 aa4.58□□□□□ -1.68
SNRPA1-209ENST00000560307 M0R381 172 aa4.58□□□□□ -1.68
SNRPA1-209ENST00000560307 IGKV1-17P01599 117 aa4.58□□□□□ -1.68
SNRPA1-209ENST00000560307 P0DMU3 169 aa4.58□□□□□ -1.68
SNRPA1-209ENST00000560307 FAM231AP0DMU4 169 aa4.58□□□□□ -1.68
SNRPA1-209ENST00000560307 FAM231CP0DMU5 169 aa4.58□□□□□ -1.68
SNRPA1-209ENST00000560307 RPL7P18124 248 aaKnown RBP4.58□□□□□ -1.68
SNRPA1-209ENST00000560307 HERVK_113P61574 105 aa4.58□□□□□ -1.68
SNRPA1-209ENST00000560307 GAGE2BQ13066 116 aa4.58□□□□□ -1.68
SNRPA1-209ENST00000560307 GAGE2EQ4V326 116 aa4.58□□□□□ -1.68
SNRPA1-209ENST00000560307 FAM201AQ5SY85 155 aa4.58□□□□□ -1.68
SNRPA1-209ENST00000560307 TMEM78Q5T7P6 136 aa4.58□□□□□ -1.68
SNRPA1-209ENST00000560307 FAM216BQ8N7L0 139 aa4.58□□□□□ -1.68
SNRPA1-209ENST00000560307 ZNF491Q8N8L2 437 aa4.58□□□□□ -1.68
SNRPA1-209ENST00000560307 NRACQ8N912 160 aa4.58□□□□□ -1.68
SNRPA1-209ENST00000560307 TOMM6Q96B49 74 aa4.58□□□□□ -1.68
SNRPA1-209ENST00000560307 MRPL53Q96EL3 112 aaKnown RBP4.58□□□□□ -1.68
SNRPA1-209ENST00000560307 CCL13Q99616 98 aa4.58□□□□□ -1.68
SNRPA1-209ENST00000560307 SLC50A1Q9BRV3 221 aa4.58□□□□□ -1.68
SNRPA1-209ENST00000560307 TTTY13Q9BZ97 58 aa4.58□□□□□ -1.68
SNRPA1-209ENST00000560307 TMEM126AQ9H061 195 aa4.58□□□□□ -1.68
SNRPA1-209ENST00000560307 DEFB127Q9H1M4 99 aa4.58□□□□□ -1.68
SNRPA1-209ENST00000560307 KLK15Q9H2R5 256 aa4.58□□□□□ -1.68
SNRPA1-209ENST00000560307 FBXL15Q9H469 300 aa4.58□□□□□ -1.68
SNRPA1-209ENST00000560307 GAGE2DQ9UEU5 116 aa4.58□□□□□ -1.68
SNRPA1-209ENST00000560307 SS18L2Q9UHA2 77 aa4.58□□□□□ -1.68
SNRPA1-209ENST00000560307 SIGLEC9Q9Y336 463 aa4.58□□□□□ -1.68
SNRPA1-209ENST00000560307 DSCAMO60469 2012 aa4.57□□□□□ -1.68
SNRPA1-209ENST00000560307 K7EIM0 57 aa4.57□□□□□ -1.68
SNRPA1-209ENST00000560307 SPRY3O43610 288 aa4.57□□□□□ -1.68
SNRPA1-209ENST00000560307 SNCGO76070 127 aa4.57□□□□□ -1.68
SNRPA1-209ENST00000560307 PPP1R17O96001 155 aa4.57□□□□□ -1.68
SNRPA1-209ENST00000560307 IGHV1-46P01743 117 aa4.57□□□□□ -1.68
SNRPA1-209ENST00000560307 IGHV3-48P01763 117 aa4.57□□□□□ -1.68
SNRPA1-209ENST00000560307 CD7P09564 240 aa4.57□□□□□ -1.68
SNRPA1-209ENST00000560307 SCGB1C2P0DMR2 95 aa4.57□□□□□ -1.68
SNRPA1-209ENST00000560307 VPREB1P12018 145 aa4.57□□□□□ -1.68
SNRPA1-209ENST00000560307 IFITM1P13164 125 aa4.57□□□□□ -1.68
SNRPA1-209ENST00000560307 COX6B1P14854 86 aa4.57□□□□□ -1.68
SNRPA1-209ENST00000560307 RPL13AP40429 203 aaKnown RBP4.57□□□□□ -1.68
SNRPA1-209ENST00000560307 PSMB2P49721 201 aa4.57□□□□□ -1.68
SNRPA1-209ENST00000560307 DLX6P56179 175 aa4.57□□□□□ -1.68
SNRPA1-209ENST00000560307 NDUFV3P56181 108 aaKnown RBP4.57□□□□□ -1.68
SNRPA1-209ENST00000560307 FXYD7P58549 80 aa4.57□□□□□ -1.68
SNRPA1-209ENST00000560307 RPL32P62910 135 aaKnown RBP4.57□□□□□ -1.68
SNRPA1-209ENST00000560307 RUSC1-AS1Q66K80 236 aa4.57□□□□□ -1.68
SNRPA1-209ENST00000560307 HCP5Q6MZN7 132 aa4.57□□□□□ -1.68
SNRPA1-209ENST00000560307 DUX4L9Q6RFH8 374 aaPredicted RBP4.57□□□□□ -1.68
SNRPA1-209ENST00000560307 PPP1R27Q86WC6 154 aa4.57□□□□□ -1.68
SNRPA1-209ENST00000560307 TDHQ8IZJ6 230 aa4.57□□□□□ -1.68
SNRPA1-209ENST00000560307 C10orf126Q8N4M7 172 aa4.57□□□□□ -1.68
SNRPA1-209ENST00000560307 NEXN-AS1Q8NBZ9 246 aa4.57□□□□□ -1.68
SNRPA1-209ENST00000560307 NUP37Q8NFH4 326 aa4.57□□□□□ -1.68
SNRPA1-209ENST00000560307 SMIM2Q9BVW6 85 aa4.57□□□□□ -1.68
SNRPA1-209ENST00000560307 HIF1ANQ9NWT6 349 aa4.57□□□□□ -1.68
SNRPA1-209ENST00000560307 KAAG1Q9UBP8 84 aa4.57□□□□□ -1.68
SNRPA1-209ENST00000560307 UFC1Q9Y3C8 167 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms