RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 M0R3E3 92 aa15.08■□□□□ 0
PSEN1-225ENST00000560005 DNASE2O00115 360 aaPredicted RBP15.08■□□□□ 0
PSEN1-225ENST00000560005 GCGP01275 180 aa15.08■□□□□ 0
PSEN1-225ENST00000560005 LTAP01374 205 aa15.08■□□□□ 0
PSEN1-225ENST00000560005 RNF212Q495C1 297 aa15.08■□□□□ 0
PSEN1-225ENST00000560005 LINC00479Q96M42 142 aa15.08■□□□□ 0
PSEN1-225ENST00000560005 PSG8Q9UQ74 426 aa15.08■□□□□ 0
PSEN1-225ENST00000560005 TRAV8-2A0A0B4J237 113 aa15.07■□□□□ 0
PSEN1-225ENST00000560005 H7BYZ3 331 aa15.07■□□□□ 0
PSEN1-225ENST00000560005 SPRY2O43597 315 aa15.07■□□□□ 0
PSEN1-225ENST00000560005 TMEM183AQ8IXX5 376 aa15.07■□□□□ 0
PSEN1-225ENST00000560005 OR10G8Q8NGN5 311 aa15.07■□□□□ 0
PSEN1-225ENST00000560005 SFRP2Q96HF1 295 aa15.07■□□□□ 0
PSEN1-225ENST00000560005 NDFIP1Q9BT67 221 aa15.07■□□□□ 0
PSEN1-225ENST00000560005 DNAH2Q9P225 4427 aa15.07■□□□□ 0
PSEN1-225ENST00000560005 TRAV25A0A0B4J276 109 aa15.06■□□□□ 0
PSEN1-225ENST00000560005 SOCS3O14543 225 aa15.06■□□□□ 0
PSEN1-225ENST00000560005 MGST1P10620 155 aaKnown RBP15.06■□□□□ 0
PSEN1-225ENST00000560005 SNRPD3P62318 126 aaKnown RBP15.06■□□□□ 0
PSEN1-225ENST00000560005 DEFB135Q30KP9 77 aa15.06■□□□□ 0
PSEN1-225ENST00000560005 Q86TA4 180 aa15.06■□□□□ 0
PSEN1-225ENST00000560005 PHLDA1Q8WV24 401 aaPredicted RBP15.06■□□□□ 0
PSEN1-225ENST00000560005 OSTCQ9NRP0 149 aa15.06■□□□□ 0
PSEN1-225ENST00000560005 TP53TG1Q9Y2A0 90 aa15.06■□□□□ 0
PSEN1-225ENST00000560005 IGLV2-11P01706 119 aa15.05■□□□□ -0
PSEN1-225ENST00000560005 IGLV2-8P01709 118 aa15.05■□□□□ -0
PSEN1-225ENST00000560005 RBPMS2Q6ZRY4 209 aaKnown RBP15.05■□□□□ -0
PSEN1-225ENST00000560005 FAM231DQ6ZW35 169 aa15.05■□□□□ -0
PSEN1-225ENST00000560005 Q6ZWC4 215 aa15.05■□□□□ -0
PSEN1-225ENST00000560005 PRNTQ86SH4 94 aa15.05■□□□□ -0
PSEN1-225ENST00000560005 ZNF738Q8NE65 137 aa15.05■□□□□ -0
PSEN1-225ENST00000560005 IMMP2LQ96T52 175 aa15.05■□□□□ -0
PSEN1-225ENST00000560005 MLST8Q9BVC4 326 aa15.05■□□□□ -0
PSEN1-225ENST00000560005 MS4A6AQ9H2W1 248 aa15.05■□□□□ -0
PSEN1-225ENST00000560005 PPP1R14DQ9NXH3 145 aa15.05■□□□□ -0
PSEN1-225ENST00000560005 PGPEP1LA6NFU8 196 aa15.04■□□□□ -0
PSEN1-225ENST00000560005 S100PP25815 95 aa15.04■□□□□ -0
PSEN1-225ENST00000560005 ERVFC1-1P60608 527 aa15.04■□□□□ -0
PSEN1-225ENST00000560005 OR10J6PQ8NGY7 276 aa15.04■□□□□ -0
PSEN1-225ENST00000560005 DCANP1Q8TF63 244 aa15.04■□□□□ -0
PSEN1-225ENST00000560005 BTF3L4Q96K17 158 aa15.04■□□□□ -0
PSEN1-225ENST00000560005 DYNC1H1Q14204 4646 aaKnown RBP15.04■□□□□ -0
PSEN1-225ENST00000560005 ZNF705FA8MVS1 300 aaPredicted RBP15.03■□□□□ -0
PSEN1-225ENST00000560005 K7EN84 100 aa15.03■□□□□ -0
PSEN1-225ENST00000560005 K7EQG2 157 aa15.03■□□□□ -0
PSEN1-225ENST00000560005 TMEM78Q5T7P6 136 aa15.03■□□□□ -0
PSEN1-225ENST00000560005 IGFL4Q6B9Z1 124 aa15.03■□□□□ -0
PSEN1-225ENST00000560005 TMEM88Q6PEY1 159 aa15.03■□□□□ -0
PSEN1-225ENST00000560005 C9orf47Q6ZRZ4 202 aa15.03■□□□□ -0
PSEN1-225ENST00000560005 RNF182Q8N6D2 247 aa15.03■□□□□ -0
PSEN1-225ENST00000560005 DAZAP1Q96EP5 407 aaKnown RBP15.03■□□□□ -0
PSEN1-225ENST00000560005 LINC00477Q96M19 166 aa15.03■□□□□ -0
PSEN1-225ENST00000560005 ZNF492Q9P255 531 aa15.03■□□□□ -0
PSEN1-225ENST00000560005 LENEPQ9Y5L5 61 aa15.03■□□□□ -0
PSEN1-225ENST00000560005 CT45A10P0DMU9 189 aa15.02■□□□□ -0
PSEN1-225ENST00000560005 HLA-DMBP28068 263 aa15.02■□□□□ -0
PSEN1-225ENST00000560005 APOC4P55056 127 aa15.02■□□□□ -0
PSEN1-225ENST00000560005 KCNIP4Q6PIL6 250 aa15.02■□□□□ -0
PSEN1-225ENST00000560005 COX8CQ7Z4L0 72 aa15.02■□□□□ -0
PSEN1-225ENST00000560005 IGKV3-7A0A075B6H7 116 aa15.01□□□□□ -0.01
PSEN1-225ENST00000560005 IGKV2-40A0A087WW87 121 aaPredicted RBP15.01□□□□□ -0.01
PSEN1-225ENST00000560005 TRAV8-1A0A0A6YYK1 113 aa15.01□□□□□ -0.01
PSEN1-225ENST00000560005 IGKV2D-40P01614 121 aaPredicted RBP15.01□□□□□ -0.01
PSEN1-225ENST00000560005 IBA57Q5T440 356 aaKnown RBP15.01□□□□□ -0.01
PSEN1-225ENST00000560005 CBLN2Q8IUK8 224 aa15.01□□□□□ -0.01
PSEN1-225ENST00000560005 GBGT1Q8N5D6 347 aa15.01□□□□□ -0.01
PSEN1-225ENST00000560005 SGK494Q96LW2 274 aa15.01□□□□□ -0.01
PSEN1-225ENST00000560005 DNAH11Q96DT5 4516 aa15□□□□□ -0.01
PSEN1-225ENST00000560005 DNAH17Q9UFH2 4485 aa15□□□□□ -0.01
PSEN1-225ENST00000560005 ZNF138P52744 262 aa15□□□□□ -0.01
PSEN1-225ENST00000560005 RPL19P84098 196 aaKnown RBP15□□□□□ -0.01
PSEN1-225ENST00000560005 TRBV7-9A0A0J9YWB2 115 aa14.99□□□□□ -0.01
PSEN1-225ENST00000560005 OR4C46A6NHA9 309 aa14.99□□□□□ -0.01
PSEN1-225ENST00000560005 GATCO43716 136 aaKnown RBP14.99□□□□□ -0.01
PSEN1-225ENST00000560005 CMC4P56277 68 aaPredicted RBP14.99□□□□□ -0.01
PSEN1-225ENST00000560005 OR5I1Q13606 314 aa14.99□□□□□ -0.01
PSEN1-225ENST00000560005 RNF183Q96D59 192 aa14.99□□□□□ -0.01
PSEN1-225ENST00000560005 SPAG8Q99932 426 aaPredicted RBP14.99□□□□□ -0.01
PSEN1-225ENST00000560005 VGLL1Q99990 258 aa14.99□□□□□ -0.01
PSEN1-225ENST00000560005 UBE2CO00762 179 aa14.98□□□□□ -0.01
PSEN1-225ENST00000560005 NHLRC2Q8NBF2 726 aa14.98□□□□□ -0.01
PSEN1-225ENST00000560005 OR4B1Q8NGF8 309 aa14.98□□□□□ -0.01
PSEN1-225ENST00000560005 C20orf173Q96LM9 149 aa14.98□□□□□ -0.01
PSEN1-225ENST00000560005 AGPAT4-IT1Q9H0P7 198 aa14.98□□□□□ -0.01
PSEN1-225ENST00000560005 TRAV9-1A0A075B6T8 112 aa14.97□□□□□ -0.01
PSEN1-225ENST00000560005 ZNF705GA8MUZ8 300 aaPredicted RBP14.97□□□□□ -0.01
PSEN1-225ENST00000560005 PRAC2D3DTV9 90 aa14.97□□□□□ -0.01
PSEN1-225ENST00000560005 NPIPB6E9PJ23 425 aa14.97□□□□□ -0.01
PSEN1-225ENST00000560005 SMUG1Q53HV7 270 aa14.97□□□□□ -0.01
PSEN1-225ENST00000560005 OR8A1Q8NGG7 326 aa14.97□□□□□ -0.01
PSEN1-225ENST00000560005 DUSP14O95147 198 aaKnown RBP14.96□□□□□ -0.01
PSEN1-225ENST00000560005 P01737 135 aa14.96□□□□□ -0.01
PSEN1-225ENST00000560005 TFPI2P48307 235 aa14.96□□□□□ -0.01
PSEN1-225ENST00000560005 CT83Q5H943 113 aa14.96□□□□□ -0.01
PSEN1-225ENST00000560005 PRR27Q6MZM9 219 aa14.96□□□□□ -0.01
PSEN1-225ENST00000560005 EBLN2Q6P2I7 272 aa14.96□□□□□ -0.01
PSEN1-225ENST00000560005 NUDT10Q8NFP7 164 aa14.96□□□□□ -0.01
PSEN1-225ENST00000560005 NUDT11Q96G61 164 aa14.96□□□□□ -0.01
PSEN1-225ENST00000560005 IL36BQ9NZH7 164 aa14.96□□□□□ -0.01
PSEN1-225ENST00000560005 PFN1P07737 140 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms