RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 PRR30Q53SZ7 412 aaPredicted RBP9.11□□□□□ -0.95
VIPAS39-211ENST00000557658 TMEM78Q5T7P6 136 aa9.11□□□□□ -0.95
VIPAS39-211ENST00000557658 ZNF502Q8TBZ5 544 aa9.11□□□□□ -0.95
VIPAS39-211ENST00000557658 VKORC1Q9BQB6 163 aa9.11□□□□□ -0.95
VIPAS39-211ENST00000557658 ZFAND3Q9H8U3 227 aa9.11□□□□□ -0.95
VIPAS39-211ENST00000557658 C11orf21Q9P2W6 132 aa9.11□□□□□ -0.95
VIPAS39-211ENST00000557658 UFC1Q9Y3C8 167 aa9.11□□□□□ -0.95
VIPAS39-211ENST00000557658 WNK2Q9Y3S1 2297 aa9.1□□□□□ -0.95
VIPAS39-211ENST00000557658 DCHS1Q96JQ0 3298 aa9.1□□□□□ -0.95
VIPAS39-211ENST00000557658 PLNP26678 52 aa9.1□□□□□ -0.95
VIPAS39-211ENST00000557658 C15orf32Q32M92 178 aa9.1□□□□□ -0.95
VIPAS39-211ENST00000557658 MAPKAPK5-AS1Q8N8E1 139 aa9.1□□□□□ -0.95
VIPAS39-211ENST00000557658 FAM110DQ8TAY7 271 aaPredicted RBP9.1□□□□□ -0.95
VIPAS39-211ENST00000557658 LAMA5O15230 3695 aa9.1□□□□□ -0.95
VIPAS39-211ENST00000557658 F8W1H4 67 aa9.1□□□□□ -0.95
VIPAS39-211ENST00000557658 MINOS1Q5TGZ0 78 aa9.1□□□□□ -0.95
VIPAS39-211ENST00000557658 FOXI2Q6ZQN5 318 aa9.1□□□□□ -0.95
VIPAS39-211ENST00000557658 ZNF479Q96JC4 524 aa9.1□□□□□ -0.95
VIPAS39-211ENST00000557658 MINOS1-NBL1R4GNA1 71 aa9.1□□□□□ -0.95
VIPAS39-211ENST00000557658 TACC2O95359 2948 aa9.1□□□□□ -0.95
VIPAS39-211ENST00000557658 IGHV7-4-1A0A0J9YVY3 117 aa9.09□□□□□ -0.95
VIPAS39-211ENST00000557658 CLEC3BP05452 202 aa9.09□□□□□ -0.95
VIPAS39-211ENST00000557658 SAMD13Q5VXD3 122 aa9.09□□□□□ -0.95
VIPAS39-211ENST00000557658 TRAV26-2A0A0B4J265 109 aa9.09□□□□□ -0.95
VIPAS39-211ENST00000557658 IGHV3-66A0A0C4DH42 116 aa9.09□□□□□ -0.95
VIPAS39-211ENST00000557658 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.09□□□□□ -0.95
VIPAS39-211ENST00000557658 J3QR89 54 aa9.09□□□□□ -0.95
VIPAS39-211ENST00000557658 C12orf74Q32Q52 190 aa9.09□□□□□ -0.95
VIPAS39-211ENST00000557658 SPANXN1Q5VSR9 72 aa9.09□□□□□ -0.95
VIPAS39-211ENST00000557658 C1orf122Q6ZSJ8 110 aa9.09□□□□□ -0.95
VIPAS39-211ENST00000557658 MRPL53Q96EL3 112 aaKnown RBP9.09□□□□□ -0.95
VIPAS39-211ENST00000557658 HIST1H4GQ99525 98 aa9.09□□□□□ -0.95
VIPAS39-211ENST00000557658 HIF1ANQ9NWT6 349 aa9.09□□□□□ -0.95
VIPAS39-211ENST00000557658 GVINP1Q7Z2Y8 2422 aa9.09□□□□□ -0.95
VIPAS39-211ENST00000557658 AGRNO00468 2067 aa9.08□□□□□ -0.96
VIPAS39-211ENST00000557658 IGHV4-4A0A075B6R2 117 aa9.08□□□□□ -0.96
VIPAS39-211ENST00000557658 FAM90A27PA6NNH2 459 aa9.08□□□□□ -0.96
VIPAS39-211ENST00000557658 ECSCRQ19T08 205 aa9.08□□□□□ -0.96
VIPAS39-211ENST00000557658 Q8N9W7 124 aa9.08□□□□□ -0.96
VIPAS39-211ENST00000557658 ABCA4P78363 2273 aa9.08□□□□□ -0.96
VIPAS39-211ENST00000557658 TRAV12-1A0A0B4J245 112 aa9.08□□□□□ -0.96
VIPAS39-211ENST00000557658 K7EMI3 77 aa9.08□□□□□ -0.96
VIPAS39-211ENST00000557658 PIEZO2Q9H5I5 2752 aa9.07□□□□□ -0.96
VIPAS39-211ENST00000557658 DMXL1Q9Y485 3027 aa9.07□□□□□ -0.96
VIPAS39-211ENST00000557658 H7C1H1 209 aa9.07□□□□□ -0.96
VIPAS39-211ENST00000557658 EFNA4P52798 201 aa9.07□□□□□ -0.96
VIPAS39-211ENST00000557658 MRAP2Q96G30 205 aa9.07□□□□□ -0.96
VIPAS39-211ENST00000557658 MSRB2Q9Y3D2 182 aa9.07□□□□□ -0.96
VIPAS39-211ENST00000557658 ANKHD1Q8IWZ3 2542 aaKnown RBP9.07□□□□□ -0.96
VIPAS39-211ENST00000557658 BSNQ9UPA5 3926 aa9.07□□□□□ -0.96
VIPAS39-211ENST00000557658 AKAP13Q12802 2813 aa9.07□□□□□ -0.96
VIPAS39-211ENST00000557658 IGHV3OR16-13A0A075B7E8 117 aa9.07□□□□□ -0.96
VIPAS39-211ENST00000557658 IGHV3-74A0A0B4J1X5 117 aa9.07□□□□□ -0.96
VIPAS39-211ENST00000557658 TRAV8-2A0A0B4J237 113 aa9.07□□□□□ -0.96
VIPAS39-211ENST00000557658 CLPSL1A2RUU4 121 aa9.07□□□□□ -0.96
VIPAS39-211ENST00000557658 F8VRH5 84 aa9.07□□□□□ -0.96
VIPAS39-211ENST00000557658 WFDC2Q14508 124 aa9.07□□□□□ -0.96
VIPAS39-211ENST00000557658 C9orf47Q6ZRZ4 202 aa9.07□□□□□ -0.96
VIPAS39-211ENST00000557658 SIGMAR1Q99720 223 aa9.07□□□□□ -0.96
VIPAS39-211ENST00000557658 SMIM2Q9BVW6 85 aa9.07□□□□□ -0.96
VIPAS39-211ENST00000557658 SPANXB1Q9NS25 103 aaPredicted RBP9.07□□□□□ -0.96
VIPAS39-211ENST00000557658 LINC01619G3V211 115 aa9.06□□□□□ -0.96
VIPAS39-211ENST00000557658 SCGB1A1P11684 91 aa9.06□□□□□ -0.96
VIPAS39-211ENST00000557658 GRNP28799 593 aaKnown RBP9.06□□□□□ -0.96
VIPAS39-211ENST00000557658 KLK9Q2XQG4 91 aa9.06□□□□□ -0.96
VIPAS39-211ENST00000557658 CLEC19AQ6UXS0 136 aa9.06□□□□□ -0.96
VIPAS39-211ENST00000557658 C8orf86Q6ZUL3 223 aa9.06□□□□□ -0.96
VIPAS39-211ENST00000557658 METTL26Q96S19 204 aa9.06□□□□□ -0.96
VIPAS39-211ENST00000557658 KLK9Q9UKQ9 250 aa9.06□□□□□ -0.96
VIPAS39-211ENST00000557658 OR11H12B2RN74 326 aa9.06□□□□□ -0.96
VIPAS39-211ENST00000557658 ZNF207O43670 478 aaKnown RBP9.06□□□□□ -0.96
VIPAS39-211ENST00000557658 CD300EQ496F6 205 aaPredicted RBP9.06□□□□□ -0.96
VIPAS39-211ENST00000557658 ORMDL2Q53FV1 153 aa9.06□□□□□ -0.96
VIPAS39-211ENST00000557658 OR11H1Q8NG94 326 aa9.06□□□□□ -0.96
VIPAS39-211ENST00000557658 OR11H2Q8NH07 326 aa9.06□□□□□ -0.96
VIPAS39-211ENST00000557658 TRBV7-3A0A075B6L6 115 aa9.05□□□□□ -0.96
VIPAS39-211ENST00000557658 H3BMG7 143 aa9.05□□□□□ -0.96
VIPAS39-211ENST00000557658 H3BVH4 76 aa9.05□□□□□ -0.96
VIPAS39-211ENST00000557658 RRN3P1Q2M238 152 aa9.05□□□□□ -0.96
VIPAS39-211ENST00000557658 FBXL19-AS1Q494R0 122 aa9.05□□□□□ -0.96
VIPAS39-211ENST00000557658 EEF1AKMT3Q96AZ1 226 aa9.05□□□□□ -0.96
VIPAS39-211ENST00000557658 CCDC140Q96MF4 163 aa9.05□□□□□ -0.96
VIPAS39-211ENST00000557658 CHTOPQ9Y3Y2 248 aaKnown RBP9.05□□□□□ -0.96
VIPAS39-211ENST00000557658 TSSC4Q9Y5U2 329 aaPredicted RBP9.05□□□□□ -0.96
VIPAS39-211ENST00000557658 TTC28Q96AY4 2481 aa9.05□□□□□ -0.96
VIPAS39-211ENST00000557658 MYMXA0A1B0GTQ4 84 aa9.05□□□□□ -0.96
VIPAS39-211ENST00000557658 ATP6V0E1O15342 81 aa9.05□□□□□ -0.96
VIPAS39-211ENST00000557658 CIDEAO60543 219 aa9.05□□□□□ -0.96
VIPAS39-211ENST00000557658 AZU1P20160 251 aa9.05□□□□□ -0.96
VIPAS39-211ENST00000557658 SCGB3A1Q96QR1 104 aa9.05□□□□□ -0.96
VIPAS39-211ENST00000557658 GTSF1LQ9H1H1 148 aa9.05□□□□□ -0.96
VIPAS39-211ENST00000557658 IGHV3-49A0A0A0MS15 119 aa9.04□□□□□ -0.96
VIPAS39-211ENST00000557658 GAGE13Q4V321 117 aa9.04□□□□□ -0.96
VIPAS39-211ENST00000557658 A0A1B0GWB2 263 aa9.04□□□□□ -0.96
VIPAS39-211ENST00000557658 GAGE12HA6NDE8 117 aa9.04□□□□□ -0.96
VIPAS39-211ENST00000557658 SLC25A16P16260 332 aa9.04□□□□□ -0.96
VIPAS39-211ENST00000557658 ETDBQ3ZM63 59 aa9.03□□□□□ -0.96
VIPAS39-211ENST00000557658 TOMM6Q96B49 74 aa9.03□□□□□ -0.96
VIPAS39-211ENST00000557658 C16orf92Q96LL3 132 aa9.03□□□□□ -0.96
VIPAS39-211ENST00000557658 ATMQ13315 3056 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms