RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 FAM216BQ8N7L0 139 aa2.22□□□□□ -2.05
SLIRP-208ENST00000556956 MAPKAPK5-AS1Q8N8E1 139 aa2.22□□□□□ -2.05
SLIRP-208ENST00000556956 OR11H6Q8NGC7 330 aa2.22□□□□□ -2.05
SLIRP-208ENST00000556956 RNF185Q96GF1 192 aa2.22□□□□□ -2.05
SLIRP-208ENST00000556956 C18orf15Q96N68 181 aa2.22□□□□□ -2.05
SLIRP-208ENST00000556956 DUX5Q96PT3 197 aa2.22□□□□□ -2.05
SLIRP-208ENST00000556956 ASCL2Q99929 193 aa2.22□□□□□ -2.05
SLIRP-208ENST00000556956 ANAPC13Q9BS18 74 aa2.22□□□□□ -2.05
SLIRP-208ENST00000556956 PRO0461Q9UI25 63 aa2.22□□□□□ -2.05
SLIRP-208ENST00000556956 RALYQ9UKM9 306 aaKnown RBP2.22□□□□□ -2.05
SLIRP-208ENST00000556956 SIGLEC9Q9Y336 463 aa2.22□□□□□ -2.05
SLIRP-208ENST00000556956 SELENOKQ9Y6D0 94 aa2.22□□□□□ -2.05
SLIRP-208ENST00000556956 SHANK1Q9Y566 2161 aa2.22□□□□□ -2.05
SLIRP-208ENST00000556956 TRBV7-3A0A075B6L6 115 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 IGHV3-21A0A0B4J1V1 117 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 SPAARA0A1B0GVQ0 90 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 TEX22C9J3V5 150 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 F8VRH5 84 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 K7EMI3 77 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 MRPS12O15235 138 aaKnown RBP2.21□□□□□ -2.06
SLIRP-208ENST00000556956 NDUFA3O95167 84 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 CNIH1O95406 144 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 PPP1R17O96001 155 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 ZNF883P0CG24 379 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 SCGB1C2P0DMR2 95 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 SLC25A16P16260 332 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 CCL3L1P16619 93 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 RPL7P18124 248 aaKnown RBP2.21□□□□□ -2.06
SLIRP-208ENST00000556956 ASIPP42127 132 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 MFAP4P55083 255 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 HERVK_113P61574 105 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 ATP5G2Q06055 141 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 SRSF9Q13242 221 aaKnown RBP eCLIP2.21□□□□□ -2.06
SLIRP-208ENST00000556956 MRGPRG-AS1Q2M3A8 158 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 ORMDL2Q53FV1 153 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 SPRNQ5BIV9 151 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 TTC32Q5I0X7 151 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 PAPPA-AS1Q5QFB9 102 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 TMEM78Q5T7P6 136 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 CFAP126Q5VTH2 177 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 DUX4L9Q6RFH8 374 aaPredicted RBP2.21□□□□□ -2.06
SLIRP-208ENST00000556956 AMTNQ6UX39 209 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 Q6ZUT4 128 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 PPP1R27Q86WC6 154 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 TEN1Q86WV5 123 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 SBSPONQ8IVN8 264 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 TDHQ8IZJ6 230 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 ZNF491Q8N8L2 437 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 NUP37Q8NFH4 326 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 FAM110DQ8TAY7 271 aaPredicted RBP2.21□□□□□ -2.06
SLIRP-208ENST00000556956 RNF183Q96D59 192 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 RNF125Q96EQ8 232 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 C17orf77Q96MU5 243 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 SCGB3A1Q96QR1 104 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 C20orf78Q9BR46 151 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 SPANXDQ9BXN6 97 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 CNFNQ9BYD5 112 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 MRPL35Q9NZE8 188 aaKnown RBP2.21□□□□□ -2.06
SLIRP-208ENST00000556956 ZNRD1Q9P1U0 126 aa2.21□□□□□ -2.06
SLIRP-208ENST00000556956 RALGAPA1Q6GYQ0 2036 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 LAMA2P24043 3122 aaKnown RBP2.2□□□□□ -2.06
SLIRP-208ENST00000556956 SPTBN5Q9NRC6 3674 aaKnown RBP2.2□□□□□ -2.06
SLIRP-208ENST00000556956 PI4KAP42356 2102 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 C5orf42Q9H799 3197 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 IGLV2-18A0A075B6J9 118 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 IGKV2-40A0A087WW87 121 aaPredicted RBP2.2□□□□□ -2.06
SLIRP-208ENST00000556956 TRAV17A0A0B4J275 112 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 IGHV1-3A0A0C4DH29 117 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 LOC107984156A0A0G2JMH3 177 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 RBAKDNA6NC62 111 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 INAFM1C9JVW0 142 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 C16orf97H3BN30 126 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 TMEM178BH3BS89 294 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 K7EIM0 57 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 SNCGO76070 127 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 GAGE7O76087 117 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 IGKV1-17P01599 117 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 IGKV2D-40P01614 121 aaPredicted RBP2.2□□□□□ -2.06
SLIRP-208ENST00000556956 MT-ATP8P03928 68 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 CLEC3BP05452 202 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 LGALS1P09382 135 aaKnown RBP2.2□□□□□ -2.06
SLIRP-208ENST00000556956 GAGE12FP0CL80 117 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 GAGE12GP0CL81 117 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 GAGE12IP0CL82 117 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 IGHV1-8P0DP01 117 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 IFITM1P13164 125 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 CD59P13987 128 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 INSL3P51460 131 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 UBE2D1P51668 147 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 DLX6P56179 175 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 GAGE2BQ13066 116 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 GAGE4Q13068 117 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 DIAPH2-AS1Q14236 149 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 MRPL23Q16540 153 aaKnown RBP2.2□□□□□ -2.06
SLIRP-208ENST00000556956 ZNF672Q499Z4 452 aaPredicted RBP2.2□□□□□ -2.06
SLIRP-208ENST00000556956 GAGE2EQ4V326 116 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 TMEM155Q4W5P6 130 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 CFAP161Q6P656 301 aa2.2□□□□□ -2.06
SLIRP-208ENST00000556956 MORN3Q6PF18 240 aaPredicted RBP2.2□□□□□ -2.06
SLIRP-208ENST00000556956 Q6Q795 121 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms