RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 ST6GAL2Q96JF0 529 aa9.68□□□□□ -0.86
SHMT2-219ENST00000555563 KRTAP17-1Q9BYP8 105 aa9.68□□□□□ -0.86
SHMT2-219ENST00000555563 TMEM167BQ9NRX6 74 aa9.68□□□□□ -0.86
SHMT2-219ENST00000555563 LENEPQ9Y5L5 61 aa9.68□□□□□ -0.86
SHMT2-219ENST00000555563 F5H768 121 aa9.67□□□□□ -0.86
SHMT2-219ENST00000555563 ATP5G1P05496 136 aa9.67□□□□□ -0.86
SHMT2-219ENST00000555563 ATP5G3P48201 142 aa9.67□□□□□ -0.86
SHMT2-219ENST00000555563 ANXA2RQ3ZCQ2 193 aa9.67□□□□□ -0.86
SHMT2-219ENST00000555563 GSN-AS1Q9NRJ2 163 aa9.67□□□□□ -0.86
SHMT2-219ENST00000555563 TP53TG3Q9ULZ0 132 aa9.67□□□□□ -0.86
SHMT2-219ENST00000555563 IGHV1OR15-1A0A075B7D0 117 aa9.66□□□□□ -0.86
SHMT2-219ENST00000555563 GAGE12BA1L429 117 aa9.66□□□□□ -0.86
SHMT2-219ENST00000555563 BCL2L11O43521 198 aa9.66□□□□□ -0.86
SHMT2-219ENST00000555563 GAGE7O76087 117 aa9.66□□□□□ -0.86
SHMT2-219ENST00000555563 TCRAP04437 139 aa9.66□□□□□ -0.86
SHMT2-219ENST00000555563 GAGE12FP0CL80 117 aa9.66□□□□□ -0.86
SHMT2-219ENST00000555563 GAGE12GP0CL81 117 aa9.66□□□□□ -0.86
SHMT2-219ENST00000555563 GAGE12IP0CL82 117 aa9.66□□□□□ -0.86
SHMT2-219ENST00000555563 FGF8P55075 233 aaPredicted RBP9.66□□□□□ -0.86
SHMT2-219ENST00000555563 DAZ2Q13117 558 aaKnown RBP9.66□□□□□ -0.86
SHMT2-219ENST00000555563 TVP23CQ96ET8 276 aa9.66□□□□□ -0.86
SHMT2-219ENST00000555563 TMPRSS5Q9H3S3 457 aa9.66□□□□□ -0.86
SHMT2-219ENST00000555563 A0A0D9SG52 128 aa9.65□□□□□ -0.86
SHMT2-219ENST00000555563 SERTM2A0A1B0GWG4 89 aa9.65□□□□□ -0.86
SHMT2-219ENST00000555563 MAP1LC3B2A6NCE7 125 aa9.65□□□□□ -0.86
SHMT2-219ENST00000555563 F6UZH7 168 aa9.65□□□□□ -0.86
SHMT2-219ENST00000555563 P0DMU3 169 aa9.65□□□□□ -0.86
SHMT2-219ENST00000555563 FAM231AP0DMU4 169 aa9.65□□□□□ -0.86
SHMT2-219ENST00000555563 FAM231CP0DMU5 169 aa9.65□□□□□ -0.86
SHMT2-219ENST00000555563 TCL1AP56279 114 aa9.65□□□□□ -0.86
SHMT2-219ENST00000555563 SUMO1P63165 101 aaKnown RBP9.65□□□□□ -0.86
SHMT2-219ENST00000555563 MUC21Q5SSG8 566 aa9.65□□□□□ -0.86
SHMT2-219ENST00000555563 IBA57Q5T440 356 aaKnown RBP9.65□□□□□ -0.86
SHMT2-219ENST00000555563 Q6AWC8 147 aa9.65□□□□□ -0.86
SHMT2-219ENST00000555563 Q6ZTI0 123 aa9.65□□□□□ -0.86
SHMT2-219ENST00000555563 SGK494Q96LW2 274 aa9.65□□□□□ -0.86
SHMT2-219ENST00000555563 ZNF471Q9BX82 626 aaPredicted RBP9.65□□□□□ -0.86
SHMT2-219ENST00000555563 MAP1LC3BQ9GZQ8 125 aa9.65□□□□□ -0.86
SHMT2-219ENST00000555563 KLF12Q9Y4X4 402 aa9.65□□□□□ -0.86
SHMT2-219ENST00000555563 KANTRA0A1W2PQU2 76 aa9.64□□□□□ -0.87
SHMT2-219ENST00000555563 FHITP49789 147 aa9.64□□□□□ -0.87
SHMT2-219ENST00000555563 UBE2G2P60604 165 aa9.64□□□□□ -0.87
SHMT2-219ENST00000555563 Q6ZNX1 250 aa9.64□□□□□ -0.87
SHMT2-219ENST00000555563 EPDR1Q9UM22 224 aa9.64□□□□□ -0.87
SHMT2-219ENST00000555563 TRGV1A0A0A0MS02 117 aa9.63□□□□□ -0.87
SHMT2-219ENST00000555563 A0A1W2PRE2 83 aa9.63□□□□□ -0.87
SHMT2-219ENST00000555563 IGLV2-11P01706 119 aa9.63□□□□□ -0.87
SHMT2-219ENST00000555563 ZNF415Q09FC8 603 aa9.63□□□□□ -0.87
SHMT2-219ENST00000555563 CYB561D1Q8N8Q1 229 aa9.63□□□□□ -0.87
SHMT2-219ENST00000555563 C15orf53Q8NAA6 179 aa9.63□□□□□ -0.87
SHMT2-219ENST00000555563 ATG101Q9BSB4 218 aa9.63□□□□□ -0.87
SHMT2-219ENST00000555563 NDFIP1Q9BT67 221 aa9.63□□□□□ -0.87
SHMT2-219ENST00000555563 TREM1Q9NP99 234 aa9.63□□□□□ -0.87
SHMT2-219ENST00000555563 NAGKQ9UJ70 344 aa9.63□□□□□ -0.87
SHMT2-219ENST00000555563 FAM74A7A6NL05 159 aa9.62□□□□□ -0.87
SHMT2-219ENST00000555563 K7EQM0 130 aa9.62□□□□□ -0.87
SHMT2-219ENST00000555563 SPINK4O60575 86 aa9.62□□□□□ -0.87
SHMT2-219ENST00000555563 PFDN1O60925 122 aa9.62□□□□□ -0.87
SHMT2-219ENST00000555563 SEC11BP0C7V7 166 aa9.62□□□□□ -0.87
SHMT2-219ENST00000555563 HOXA5P20719 270 aa9.62□□□□□ -0.87
SHMT2-219ENST00000555563 TMUB2Q71RG4 321 aa9.62□□□□□ -0.87
SHMT2-219ENST00000555563 TCTE3Q8IZS6 198 aa9.62□□□□□ -0.87
SHMT2-219ENST00000555563 POM121L12Q8N7R1 296 aa9.62□□□□□ -0.87
SHMT2-219ENST00000555563 TMEM75Q8N9X5 138 aa9.62□□□□□ -0.87
SHMT2-219ENST00000555563 MRPL16Q9NX20 251 aaKnown RBP9.62□□□□□ -0.87
SHMT2-219ENST00000555563 TRGV2A0A075B6R0 118 aa9.61□□□□□ -0.87
SHMT2-219ENST00000555563 FLI1Q01543 452 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-219ENST00000555563 TMEM183BQ1AE95 376 aa9.61□□□□□ -0.87
SHMT2-219ENST00000555563 FAM159AQ6UWV7 190 aa9.61□□□□□ -0.87
SHMT2-219ENST00000555563 UBE2DNLQ8IWF7 75 aa9.61□□□□□ -0.87
SHMT2-219ENST00000555563 TMEM183AQ8IXX5 376 aa9.61□□□□□ -0.87
SHMT2-219ENST00000555563 FAM213BQ8TBF2 198 aa9.61□□□□□ -0.87
SHMT2-219ENST00000555563 C18orf15Q96N68 181 aa9.61□□□□□ -0.87
SHMT2-219ENST00000555563 C8orf49Q96NF6 230 aa9.61□□□□□ -0.87
SHMT2-219ENST00000555563 MDFICQ9P1T7 246 aa9.61□□□□□ -0.87
SHMT2-219ENST00000555563 PSG8Q9UQ74 426 aa9.61□□□□□ -0.87
SHMT2-219ENST00000555563 TRGV11A0A075B6L2 103 aa9.6□□□□□ -0.87
SHMT2-219ENST00000555563 TRAV21A0A0B4J279 112 aa9.6□□□□□ -0.87
SHMT2-219ENST00000555563 UMAD1C9J7I0 102 aa9.6□□□□□ -0.87
SHMT2-219ENST00000555563 PEX7O00628 323 aa9.6□□□□□ -0.87
SHMT2-219ENST00000555563 NUDT3O95989 172 aa9.6□□□□□ -0.87
SHMT2-219ENST00000555563 IFNA7P01567 189 aa9.6□□□□□ -0.87
SHMT2-219ENST00000555563 EIF5AP63241 154 aaKnown RBP9.6□□□□□ -0.87
SHMT2-219ENST00000555563 OR5I1Q13606 314 aa9.6□□□□□ -0.87
SHMT2-219ENST00000555563 TDRG1Q3Y452 100 aa9.6□□□□□ -0.87
SHMT2-219ENST00000555563 PRNTQ86SH4 94 aa9.6□□□□□ -0.87
SHMT2-219ENST00000555563 STOML3Q8TAV4 291 aa9.6□□□□□ -0.87
SHMT2-219ENST00000555563 hCG_2014768A0A024R1R8 64 aa9.59□□□□□ -0.87
SHMT2-219ENST00000555563 TRAV26-1A0A087WT03 109 aa9.59□□□□□ -0.87
SHMT2-219ENST00000555563 TRAV34A0A0B4J273 112 aa9.59□□□□□ -0.87
SHMT2-219ENST00000555563 TPT1P13693 172 aaKnown RBP9.59□□□□□ -0.87
SHMT2-219ENST00000555563 ZNF80P51504 273 aaPredicted RBP9.59□□□□□ -0.87
SHMT2-219ENST00000555563 LGALS9BQ3B8N2 356 aa9.59□□□□□ -0.87
SHMT2-219ENST00000555563 LINC00479Q96M42 142 aa9.59□□□□□ -0.87
SHMT2-219ENST00000555563 A0A0J9YY99 117 aa9.58□□□□□ -0.88
SHMT2-219ENST00000555563 A0A1B0GV50 99 aa9.58□□□□□ -0.88
SHMT2-219ENST00000555563 FBLL1A6NHQ2 334 aaKnown RBP9.58□□□□□ -0.88
SHMT2-219ENST00000555563 GCGP01275 180 aa9.58□□□□□ -0.88
SHMT2-219ENST00000555563 TYMSP04818 313 aa9.58□□□□□ -0.88
SHMT2-219ENST00000555563 RNF212Q495C1 297 aa9.58□□□□□ -0.88
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