RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 KIR3DS1Q14943 382 aa18.34■□□□□ 0.53
TTC3-225ENST00000540756 RBPMS2Q6ZRY4 209 aaKnown RBP18.34■□□□□ 0.53
TTC3-225ENST00000540756 OR4B1Q8NGF8 309 aa18.34■□□□□ 0.53
TTC3-225ENST00000540756 LINC00477Q96M19 166 aa18.34■□□□□ 0.53
TTC3-225ENST00000540756 SNRPD3P62318 126 aaKnown RBP18.33■□□□□ 0.53
TTC3-225ENST00000540756 PGLYRP4Q96LB8 373 aa18.33■□□□□ 0.53
TTC3-225ENST00000540756 PPP1R14DQ9NXH3 145 aa18.33■□□□□ 0.53
TTC3-225ENST00000540756 LOC105371267A0A1B0GV96 52 aa18.33■□□□□ 0.52
TTC3-225ENST00000540756 FABP9Q0Z7S8 132 aa18.33■□□□□ 0.52
TTC3-225ENST00000540756 PRR31Q5SQ13 230 aa18.33■□□□□ 0.52
TTC3-225ENST00000540756 SAMD13Q5VXD3 122 aa18.33■□□□□ 0.52
TTC3-225ENST00000540756 PAFAH1B2P68402 229 aa18.32■□□□□ 0.52
TTC3-225ENST00000540756 ZFAND2AQ8N6M9 145 aa18.32■□□□□ 0.52
TTC3-225ENST00000540756 ACTL10Q5JWF8 245 aa18.32■□□□□ 0.52
TTC3-225ENST00000540756 C11orf21Q9P2W6 132 aa18.32■□□□□ 0.52
TTC3-225ENST00000540756 HIST1H2BKO60814 126 aa18.31■□□□□ 0.52
TTC3-225ENST00000540756 HIST1H2BJP06899 126 aa18.31■□□□□ 0.52
TTC3-225ENST00000540756 TRGC1P0CF51 173 aa18.31■□□□□ 0.52
TTC3-225ENST00000540756 HIST1H2BOP23527 126 aa18.31■□□□□ 0.52
TTC3-225ENST00000540756 HIST1H2BBP33778 126 aa18.31■□□□□ 0.52
TTC3-225ENST00000540756 HIST1H2BDP58876 126 aa18.31■□□□□ 0.52
TTC3-225ENST00000540756 HIST1H2BCP62807 126 aa18.31■□□□□ 0.52
TTC3-225ENST00000540756 HIST2H2BEQ16778 126 aa18.31■□□□□ 0.52
TTC3-225ENST00000540756 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.31■□□□□ 0.52
TTC3-225ENST00000540756 NDUFA11Q86Y39 141 aa18.31■□□□□ 0.52
TTC3-225ENST00000540756 HIST1H2BHQ93079 126 aa18.31■□□□□ 0.52
TTC3-225ENST00000540756 FAM19A4Q96LR4 140 aa18.31■□□□□ 0.52
TTC3-225ENST00000540756 HIST1H2BNQ99877 126 aa18.31■□□□□ 0.52
TTC3-225ENST00000540756 HIST1H2BMQ99879 126 aa18.31■□□□□ 0.52
TTC3-225ENST00000540756 TMEM189A5PLL7 270 aa18.3■□□□□ 0.52
TTC3-225ENST00000540756 FABP5P3A8MUU1 101 aa18.3■□□□□ 0.52
TTC3-225ENST00000540756 TRAPPC1Q9Y5R8 145 aa18.3■□□□□ 0.52
TTC3-225ENST00000540756 IGKV3-20P01619 116 aa18.3■□□□□ 0.52
TTC3-225ENST00000540756 ZNF124Q15973 351 aa18.3■□□□□ 0.52
TTC3-225ENST00000540756 MAST4O15021 2626 aa18.29■□□□□ 0.52
TTC3-225ENST00000540756 ORM1P02763 201 aa18.29■□□□□ 0.52
TTC3-225ENST00000540756 GFRA4Q9GZZ7 299 aa18.29■□□□□ 0.52
TTC3-225ENST00000540756 A0A0J9YX75 114 aa18.28■□□□□ 0.52
TTC3-225ENST00000540756 SNURFLB1AK76 121 aa18.28■□□□□ 0.52
TTC3-225ENST00000540756 TPPP3Q9BW30 176 aa18.28■□□□□ 0.52
TTC3-225ENST00000540756 A0A1B0GUS0 222 aa18.27■□□□□ 0.52
TTC3-225ENST00000540756 DEFB131AP59861 70 aa18.27■□□□□ 0.52
TTC3-225ENST00000540756 TMEM136Q6ZRR5 245 aa18.27■□□□□ 0.52
TTC3-225ENST00000540756 LENEPQ9Y5L5 61 aa18.27■□□□□ 0.52
TTC3-225ENST00000540756 TRRAPQ9Y4A5 3859 aa18.27■□□□□ 0.52
TTC3-225ENST00000540756 IGKV3D-20A0A0C4DH25 116 aa18.27■□□□□ 0.51
TTC3-225ENST00000540756 GRIFINA4D1Z8 144 aa18.27■□□□□ 0.51
TTC3-225ENST00000540756 ZNF256Q9Y2P7 627 aaPredicted RBP18.27■□□□□ 0.51
TTC3-225ENST00000540756 CAMPP49913 170 aa18.26■□□□□ 0.51
TTC3-225ENST00000540756 RAB4BP61018 213 aa18.26■□□□□ 0.51
TTC3-225ENST00000540756 FBN1P35555 2871 aaKnown RBP18.26■□□□□ 0.51
TTC3-225ENST00000540756 MUC21A0A0G2JKD1 596 aa18.25■□□□□ 0.51
TTC3-225ENST00000540756 MUC21A0A140T8X8 626 aa18.25■□□□□ 0.51
TTC3-225ENST00000540756 KNCNA6PVL3 124 aa18.25■□□□□ 0.51
TTC3-225ENST00000540756 SAP30O75446 220 aa18.25■□□□□ 0.51
TTC3-225ENST00000540756 RNASE4P34096 147 aaKnown RBP18.25■□□□□ 0.51
TTC3-225ENST00000540756 FOXA3P55318 350 aaPredicted RBP18.25■□□□□ 0.51
TTC3-225ENST00000540756 SSTP61278 116 aa18.25■□□□□ 0.51
TTC3-225ENST00000540756 MUC21Q5SSG8 566 aa18.25■□□□□ 0.51
TTC3-225ENST00000540756 MRPL18Q9H0U6 180 aaKnown RBP18.25■□□□□ 0.51
TTC3-225ENST00000540756 FAM231BA6NCW3 169 aa18.25■□□□□ 0.51
TTC3-225ENST00000540756 GPX1P07203 203 aa18.25■□□□□ 0.51
TTC3-225ENST00000540756 SNRPEP62304 92 aaKnown RBP18.25■□□□□ 0.51
TTC3-225ENST00000540756 SAV1Q9H4B6 383 aaPredicted RBP18.25■□□□□ 0.51
TTC3-225ENST00000540756 SIGLEC8Q9NYZ4 499 aa18.25■□□□□ 0.51
TTC3-225ENST00000540756 A0A1B0GXF2 115 aa18.24■□□□□ 0.51
TTC3-225ENST00000540756 SPATA3Q8NHX4 192 aa18.24■□□□□ 0.51
TTC3-225ENST00000540756 GNB1LQ9BYB4 327 aa18.24■□□□□ 0.51
TTC3-225ENST00000540756 ARMS2P0C7Q2 107 aa18.23■□□□□ 0.51
TTC3-225ENST00000540756 LINC01559Q495D7 138 aa18.23■□□□□ 0.51
TTC3-225ENST00000540756 EBLN2Q6P2I7 272 aa18.23■□□□□ 0.51
TTC3-225ENST00000540756 CRISP2P16562 243 aa18.23■□□□□ 0.51
TTC3-225ENST00000540756 SSBP4Q9BWG4 385 aaPredicted RBP18.23■□□□□ 0.51
TTC3-225ENST00000540756 MAP6D1Q9H9H5 199 aa18.23■□□□□ 0.51
TTC3-225ENST00000540756 TRAV2A0A0B4J234 112 aa18.22■□□□□ 0.51
TTC3-225ENST00000540756 NDUFA6P56556 154 aa18.22■□□□□ 0.51
TTC3-225ENST00000540756 LYZL1Q6UWQ5 148 aa18.22■□□□□ 0.51
TTC3-225ENST00000540756 APRG1Q8IVJ8 170 aa18.22■□□□□ 0.51
TTC3-225ENST00000540756 NOTCH3Q9UM47 2321 aa18.22■□□□□ 0.51
TTC3-225ENST00000540756 PF4P02776 101 aa18.22■□□□□ 0.51
TTC3-225ENST00000540756 KIAA1644Q3SXP7 199 aa18.22■□□□□ 0.51
TTC3-225ENST00000540756 FOXI2Q6ZQN5 318 aa18.22■□□□□ 0.51
TTC3-225ENST00000540756 SPAG8Q99932 426 aaPredicted RBP18.22■□□□□ 0.51
TTC3-225ENST00000540756 M0R2Z0 102 aa18.21■□□□□ 0.51
TTC3-225ENST00000540756 S100A6P06703 90 aa18.21■□□□□ 0.51
TTC3-225ENST00000540756 NAGKQ9UJ70 344 aa18.21■□□□□ 0.51
TTC3-225ENST00000540756 KLLNB2CW77 178 aa18.2■□□□□ 0.5
TTC3-225ENST00000540756 SLAQ13239 276 aa18.2■□□□□ 0.5
TTC3-225ENST00000540756 LINC00482Q8N8I6 264 aa18.2■□□□□ 0.5
TTC3-225ENST00000540756 CITED1Q99966 193 aa18.2■□□□□ 0.5
TTC3-225ENST00000540756 TRAV12-2A0A075B6T6 113 aa18.2■□□□□ 0.5
TTC3-225ENST00000540756 C5orf52A6NGY3 159 aa18.2■□□□□ 0.5
TTC3-225ENST00000540756 HBBP68871 147 aa18.2■□□□□ 0.5
TTC3-225ENST00000540756 ATP5L2Q7Z4Y8 100 aa18.2■□□□□ 0.5
TTC3-225ENST00000540756 XKRY2A2RUG3 117 aa18.19■□□□□ 0.5
TTC3-225ENST00000540756 OR4C46A6NHA9 309 aa18.19■□□□□ 0.5
TTC3-225ENST00000540756 WDR73Q6P4I2 378 aa18.19■□□□□ 0.5
TTC3-225ENST00000540756 TRAV25A0A0B4J276 109 aa18.18■□□□□ 0.5
TTC3-225ENST00000540756 A0A1B0GUT8 65 aa18.18■□□□□ 0.5
TTC3-225ENST00000540756 IGLC6P0CF74 106 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms