RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 ACYP1P07311 99 aa2.17□□□□□ -2.06
PTPRK-220ENST00000531466 CHTF8P0CG12 524 aa2.17□□□□□ -2.06
PTPRK-220ENST00000531466 RNASE4P34096 147 aaKnown RBP2.17□□□□□ -2.06
PTPRK-220ENST00000531466 FUSP35637 526 aaKnown RBP eCLIP2.17□□□□□ -2.06
PTPRK-220ENST00000531466 MPV17P39210 176 aa2.17□□□□□ -2.06
PTPRK-220ENST00000531466 RPL27AP46776 148 aaKnown RBP2.17□□□□□ -2.06
PTPRK-220ENST00000531466 SMIM11AP58511 58 aa2.17□□□□□ -2.06
PTPRK-220ENST00000531466 SNRPFP62306 86 aaKnown RBP2.17□□□□□ -2.06
PTPRK-220ENST00000531466 RPL30P62888 115 aaKnown RBP2.17□□□□□ -2.06
PTPRK-220ENST00000531466 PYDC2Q56P42 97 aa2.17□□□□□ -2.06
PTPRK-220ENST00000531466 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.17□□□□□ -2.06
PTPRK-220ENST00000531466 MIR17HGQ75NE6 70 aa2.17□□□□□ -2.06
PTPRK-220ENST00000531466 PDPNQ86YL7 162 aa2.17□□□□□ -2.06
PTPRK-220ENST00000531466 PCP2Q8IVA1 136 aa2.17□□□□□ -2.06
PTPRK-220ENST00000531466 TMEM61Q8N0U2 210 aa2.17□□□□□ -2.06
PTPRK-220ENST00000531466 Q8N2B8 174 aa2.17□□□□□ -2.06
PTPRK-220ENST00000531466 FAM216BQ8N7L0 139 aa2.17□□□□□ -2.06
PTPRK-220ENST00000531466 AMELYQ99218 206 aa2.17□□□□□ -2.06
PTPRK-220ENST00000531466 DPH3P1Q9H4G8 78 aa2.17□□□□□ -2.06
PTPRK-220ENST00000531466 CCL28Q9NRJ3 127 aa2.17□□□□□ -2.06
PTPRK-220ENST00000531466 VWDEQ8N2E2 1590 aa2.17□□□□□ -2.06
PTPRK-220ENST00000531466 CDK5RAP2Q96SN8 1893 aa2.17□□□□□ -2.06
PTPRK-220ENST00000531466 PTPRFP10586 1907 aa2.17□□□□□ -2.06
PTPRK-220ENST00000531466 SBF2Q86WG5 1849 aa2.17□□□□□ -2.06
PTPRK-220ENST00000531466 MON2Q7Z3U7 1717 aa2.17□□□□□ -2.06
PTPRK-220ENST00000531466 SCN10AQ9Y5Y9 1956 aa2.16□□□□□ -2.06
PTPRK-220ENST00000531466 WIZO95785 1651 aa2.16□□□□□ -2.06
PTPRK-220ENST00000531466 TOPAZ1Q8N9V7 1692 aa2.16□□□□□ -2.06
PTPRK-220ENST00000531466 FXYD6-FXYD2A0A087WZ82 144 aa2.16□□□□□ -2.06
PTPRK-220ENST00000531466 TRAV2A0A0B4J234 112 aa2.16□□□□□ -2.06
PTPRK-220ENST00000531466 SLC25A14O95258 325 aaPredicted RBP2.16□□□□□ -2.06
PTPRK-220ENST00000531466 IGLV2-8P01709 118 aa2.16□□□□□ -2.06
PTPRK-220ENST00000531466 SMIM13P0DJ93 91 aa2.16□□□□□ -2.06
PTPRK-220ENST00000531466 INAFM2P0DMQ5 153 aa2.16□□□□□ -2.06
PTPRK-220ENST00000531466 CXCL8P10145 99 aa2.16□□□□□ -2.06
PTPRK-220ENST00000531466 CD28P10747 220 aa2.16□□□□□ -2.06
PTPRK-220ENST00000531466 PTHLHP12272 177 aa2.16□□□□□ -2.06
PTPRK-220ENST00000531466 CKS2P33552 79 aa2.16□□□□□ -2.06
PTPRK-220ENST00000531466 BLCAPP62952 87 aa2.16□□□□□ -2.06
PTPRK-220ENST00000531466 RPL18Q07020 188 aaKnown RBP2.16□□□□□ -2.06
PTPRK-220ENST00000531466 FUT5Q11128 374 aa2.16□□□□□ -2.06
PTPRK-220ENST00000531466 NMSQ5H8A3 153 aa2.16□□□□□ -2.06
PTPRK-220ENST00000531466 NOXRED1Q6NXP6 359 aa2.16□□□□□ -2.06
PTPRK-220ENST00000531466 ATP11AUNQ6ZP68 121 aa2.16□□□□□ -2.06
PTPRK-220ENST00000531466 ORMDL3Q8N138 153 aa2.16□□□□□ -2.06
PTPRK-220ENST00000531466 SERP2Q8N6R1 65 aa2.16□□□□□ -2.06
PTPRK-220ENST00000531466 WFDC5Q8TCV5 224 aa2.16□□□□□ -2.06
PTPRK-220ENST00000531466 C10orf105Q8TEF2 133 aa2.16□□□□□ -2.06
PTPRK-220ENST00000531466 TVP23CQ96ET8 276 aa2.16□□□□□ -2.06
PTPRK-220ENST00000531466 SCGB3A1Q96QR1 104 aa2.16□□□□□ -2.06
PTPRK-220ENST00000531466 FXYD6Q9H0Q3 95 aa2.16□□□□□ -2.06
PTPRK-220ENST00000531466 MAP2P11137 1827 aaKnown RBP2.16□□□□□ -2.06
PTPRK-220ENST00000531466 EDC4Q6P2E9 1401 aaKnown RBP2.16□□□□□ -2.06
PTPRK-220ENST00000531466 TRIP11Q15643 1979 aa2.16□□□□□ -2.06
PTPRK-220ENST00000531466 UNC13BO14795 1591 aa2.15□□□□□ -2.06
PTPRK-220ENST00000531466 GLI2P10070 1586 aa2.15□□□□□ -2.06
PTPRK-220ENST00000531466 MED1Q15648 1581 aaPredicted RBP2.15□□□□□ -2.06
PTPRK-220ENST00000531466 SAMD9Q5K651 1589 aa2.15□□□□□ -2.06
PTPRK-220ENST00000531466 NCKAP5O14513 1909 aa2.15□□□□□ -2.06
PTPRK-220ENST00000531466 MYH6P13533 1939 aa2.15□□□□□ -2.06
PTPRK-220ENST00000531466 TRAV14DV4A0A0A6YYC5 116 aa2.15□□□□□ -2.07
PTPRK-220ENST00000531466 TRAV17A0A0B4J275 112 aa2.15□□□□□ -2.07
PTPRK-220ENST00000531466 A0A0J9YXY3 114 aa2.15□□□□□ -2.07
PTPRK-220ENST00000531466 MDFIC2A0A1B0GVS7 189 aa2.15□□□□□ -2.07
PTPRK-220ENST00000531466 hADV29S1A0JD25 119 aa2.15□□□□□ -2.07
PTPRK-220ENST00000531466 C3orf84H3BNL1 204 aa2.15□□□□□ -2.07
PTPRK-220ENST00000531466 NUPR1O60356 82 aa2.15□□□□□ -2.07
PTPRK-220ENST00000531466 IGHV3-7P01780 117 aa2.15□□□□□ -2.07
PTPRK-220ENST00000531466 CCL4P13236 92 aa2.15□□□□□ -2.07
PTPRK-220ENST00000531466 NPPCP23582 126 aa2.15□□□□□ -2.07
PTPRK-220ENST00000531466 KRTAP12-3P60328 96 aa2.15□□□□□ -2.07
PTPRK-220ENST00000531466 REG3AQ06141 175 aa2.15□□□□□ -2.07
PTPRK-220ENST00000531466 WFDC2Q14508 124 aa2.15□□□□□ -2.07
PTPRK-220ENST00000531466 LY6EQ16553 131 aa2.15□□□□□ -2.07
PTPRK-220ENST00000531466 CFAP126Q5VTH2 177 aa2.15□□□□□ -2.07
PTPRK-220ENST00000531466 FP248Q71RG6 208 aaPredicted RBP2.15□□□□□ -2.07
PTPRK-220ENST00000531466 ZNF645Q8N7E2 425 aa2.15□□□□□ -2.07
PTPRK-220ENST00000531466 DAND5Q8N907 189 aa2.15□□□□□ -2.07
PTPRK-220ENST00000531466 AQP3Q92482 292 aa2.15□□□□□ -2.07
PTPRK-220ENST00000531466 LINC00467Q9BRT7 94 aa2.15□□□□□ -2.07
PTPRK-220ENST00000531466 HHLA3Q9XRX5 114 aa2.15□□□□□ -2.07
PTPRK-220ENST00000531466 KIAA0556O60303 1618 aa2.15□□□□□ -2.07
PTPRK-220ENST00000531466 AHDC1Q5TGY3 1603 aaPredicted RBP2.15□□□□□ -2.07
PTPRK-220ENST00000531466 ADCY10Q96PN6 1610 aa2.15□□□□□ -2.07
PTPRK-220ENST00000531466 ZNF638Q14966 1978 aaKnown RBP2.15□□□□□ -2.07
PTPRK-220ENST00000531466 FER1L6Q2WGJ9 1857 aa2.15□□□□□ -2.07
PTPRK-220ENST00000531466 CCDC88AQ3V6T2 1871 aa2.15□□□□□ -2.07
PTPRK-220ENST00000531466 DOCK5Q9H7D0 1870 aa2.15□□□□□ -2.07
PTPRK-220ENST00000531466 NFAT5O94916 1531 aa2.15□□□□□ -2.07
PTPRK-220ENST00000531466 STRCQ7RTU9 1775 aa2.15□□□□□ -2.07
PTPRK-220ENST00000531466 FANCMQ8IYD8 2048 aa2.15□□□□□ -2.07
PTPRK-220ENST00000531466 ZNF142P52746 1687 aaPredicted RBP2.15□□□□□ -2.07
PTPRK-220ENST00000531466 TCHHQ07283 1943 aa2.15□□□□□ -2.07
PTPRK-220ENST00000531466 PARP14Q460N5 1801 aa2.14□□□□□ -2.07
PTPRK-220ENST00000531466 NLRC5Q86WI3 1866 aa2.14□□□□□ -2.07
PTPRK-220ENST00000531466 KMT2EQ8IZD2 1858 aa2.14□□□□□ -2.07
PTPRK-220ENST00000531466 IGLV1-50A0A075B6I6 118 aa2.14□□□□□ -2.07
PTPRK-220ENST00000531466 A0A0G2JND7 137 aa2.14□□□□□ -2.07
PTPRK-220ENST00000531466 E7EQL1 145 aa2.14□□□□□ -2.07
PTPRK-220ENST00000531466 F2Z2F3 143 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 198.7 ms