RNA–Protein interactions for RNA: ENST00000518668.5

DENND3-208, Transcript of DENN domain containing 3, human

TSL 5

Gene DENND3, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND3-208	ENST00000518668	TRBV20-1	A0A075B6N2	111 aa		11.14	□□□□□ -0.63
DENND3-208	ENST00000518668	SIVA1	O15304	175 aa		11.14	□□□□□ -0.63
DENND3-208	ENST00000518668	C2orf82	Q6UX34	121 aa		11.14	□□□□□ -0.63
DENND3-208	ENST00000518668		I3L2K1	104 aa		11.13	□□□□□ -0.63
DENND3-208	ENST00000518668	XCL2	Q9UBD3	114 aa		11.13	□□□□□ -0.63
DENND3-208	ENST00000518668	KLF2	Q9Y5W3	355 aa	Predicted RBP	11.13	□□□□□ -0.63
DENND3-208	ENST00000518668	AZU1	P20160	251 aa		11.13	□□□□□ -0.63
DENND3-208	ENST00000518668	ZNF493	Q6ZR52	646 aa		11.13	□□□□□ -0.63
DENND3-208	ENST00000518668	FOXE3	Q13461	319 aa		11.13	□□□□□ -0.63
DENND3-208	ENST00000518668		F8VRH5	84 aa		11.13	□□□□□ -0.63
DENND3-208	ENST00000518668		J3QKU1	62 aa		11.13	□□□□□ -0.63
DENND3-208	ENST00000518668	KIF26A	Q9ULI4	1882 aa	Predicted RBP	11.13	□□□□□ -0.63
DENND3-208	ENST00000518668	DIDO1	Q9BTC0	2240 aa	Known RBP	11.13	□□□□□ -0.63
DENND3-208	ENST00000518668		A0A1B0GUS0	222 aa		11.12	□□□□□ -0.63
DENND3-208	ENST00000518668	IGLV11-55	A0A075B6I3	123 aa		11.12	□□□□□ -0.63
DENND3-208	ENST00000518668	APOC4	P55056	127 aa		11.12	□□□□□ -0.63
DENND3-208	ENST00000518668	SSBP2	P81877	361 aa	Predicted RBP	11.12	□□□□□ -0.63
DENND3-208	ENST00000518668	KLK9	Q9UKQ9	250 aa		11.12	□□□□□ -0.63
DENND3-208	ENST00000518668	NPY	P01303	97 aa		11.12	□□□□□ -0.63
DENND3-208	ENST00000518668	FBXL19-AS1	Q494R0	122 aa		11.12	□□□□□ -0.63
DENND3-208	ENST00000518668	GATD1	Q8NB37	220 aa		11.12	□□□□□ -0.63
DENND3-208	ENST00000518668	GP9	P14770	177 aa		11.12	□□□□□ -0.63
DENND3-208	ENST00000518668	COL6A6	A6NMZ7	2263 aa		11.12	□□□□□ -0.63
DENND3-208	ENST00000518668	DAZAP2	Q15038	168 aa	Predicted RBP	11.11	□□□□□ -0.63
DENND3-208	ENST00000518668	RNF152	Q8N8N0	203 aa		11.11	□□□□□ -0.63
DENND3-208	ENST00000518668	TMEM243	Q9BU79	118 aa		11.11	□□□□□ -0.63
DENND3-208	ENST00000518668	EREG	O14944	169 aa		11.11	□□□□□ -0.63
DENND3-208	ENST00000518668	DEFB130B	P0DP73	79 aa		11.11	□□□□□ -0.63
DENND3-208	ENST00000518668	DEFB130A	P0DP74	79 aa		11.11	□□□□□ -0.63
DENND3-208	ENST00000518668	RHOH	Q15669	191 aa		11.11	□□□□□ -0.63
DENND3-208	ENST00000518668	UBE2DNL	Q8IWF7	75 aa		11.11	□□□□□ -0.63
DENND3-208	ENST00000518668		K7EIM0	57 aa		11.1	□□□□□ -0.63
DENND3-208	ENST00000518668	GAGE2B	Q13066	116 aa		11.1	□□□□□ -0.63
DENND3-208	ENST00000518668	GAGE2E	Q4V326	116 aa		11.1	□□□□□ -0.63
DENND3-208	ENST00000518668	GAGE2D	Q9UEU5	116 aa		11.1	□□□□□ -0.63
DENND3-208	ENST00000518668	IGHV7-81	A0A0B4J1V7	117 aa		11.1	□□□□□ -0.63
DENND3-208	ENST00000518668	SPRN	Q5BIV9	151 aa		11.1	□□□□□ -0.63
DENND3-208	ENST00000518668	ANAPC13	Q9BS18	74 aa		11.1	□□□□□ -0.63
DENND3-208	ENST00000518668	AGPAT4-IT1	Q9H0P7	198 aa		11.1	□□□□□ -0.63
DENND3-208	ENST00000518668	GAGE12B	A1L429	117 aa		11.09	□□□□□ -0.63
DENND3-208	ENST00000518668	DAD1	P61803	113 aa		11.09	□□□□□ -0.63
DENND3-208	ENST00000518668	GAGE12J	A6NER3	117 aa		11.09	□□□□□ -0.63
DENND3-208	ENST00000518668	C9orf118	A6NHY6	69 aa		11.09	□□□□□ -0.63
DENND3-208	ENST00000518668	GAGE1	Q13065	139 aa		11.09	□□□□□ -0.63
DENND3-208	ENST00000518668	GAGE4	Q13068	117 aa		11.09	□□□□□ -0.63
DENND3-208	ENST00000518668	GAGE5	Q13069	117 aa		11.09	□□□□□ -0.63
DENND3-208	ENST00000518668	COL4A4	P53420	1690 aa	Predicted RBP	11.09	□□□□□ -0.63
DENND3-208	ENST00000518668	OBSL1	O75147	1896 aa		11.09	□□□□□ -0.63
DENND3-208	ENST00000518668	C2orf16	Q68DN1	1984 aa		11.09	□□□□□ -0.63
DENND3-208	ENST00000518668	NPC2	P61916	151 aa		11.09	□□□□□ -0.63
DENND3-208	ENST00000518668	DYNAP	Q8N1N2	210 aa		11.09	□□□□□ -0.63
DENND3-208	ENST00000518668	NAA38	Q9BRA0	125 aa	Known RBP	11.09	□□□□□ -0.63
DENND3-208	ENST00000518668	IGLL1	P15814	213 aa		11.09	□□□□□ -0.63
DENND3-208	ENST00000518668	ZFAND6	Q6FIF0	208 aa		11.09	□□□□□ -0.63
DENND3-208	ENST00000518668	SEM1	Q6ZVN7	128 aa		11.09	□□□□□ -0.63
DENND3-208	ENST00000518668	SNHG12	Q9BXW3	62 aa		11.09	□□□□□ -0.63
DENND3-208	ENST00000518668	KNCN	A6PVL3	124 aa		11.08	□□□□□ -0.63
DENND3-208	ENST00000518668	CRYGC	P07315	174 aa		11.08	□□□□□ -0.63
DENND3-208	ENST00000518668	C3orf56	Q8N813	242 aa		11.08	□□□□□ -0.63
DENND3-208	ENST00000518668	CACNA1H	O95180	2353 aa		11.08	□□□□□ -0.64
DENND3-208	ENST00000518668	DEFB112	Q30KQ8	113 aa		11.08	□□□□□ -0.64
DENND3-208	ENST00000518668		A0A1W2PNU3	283 aa	Predicted RBP	11.08	□□□□□ -0.64
DENND3-208	ENST00000518668	IGKV1-17	P01599	117 aa		11.08	□□□□□ -0.64
DENND3-208	ENST00000518668	GRN	P28799	593 aa	Known RBP	11.08	□□□□□ -0.64
DENND3-208	ENST00000518668	TMEM89	A2RUT3	159 aa		11.07	□□□□□ -0.64
DENND3-208	ENST00000518668	IGLV1-47	P01700	117 aa		11.07	□□□□□ -0.64
DENND3-208	ENST00000518668	HERVK_113	P63121	156 aa		11.07	□□□□□ -0.64
DENND3-208	ENST00000518668	TSSC4	Q9Y5U2	329 aa	Predicted RBP	11.07	□□□□□ -0.64
DENND3-208	ENST00000518668	USF3	Q68DE3	2245 aa		11.07	□□□□□ -0.64
DENND3-208	ENST00000518668	EGR2	P11161	476 aa	Predicted RBP	11.07	□□□□□ -0.64
DENND3-208	ENST00000518668	TRBV6-1	A0A0K0K1D8	114 aa		11.07	□□□□□ -0.64
DENND3-208	ENST00000518668	ZNF48	Q96MX3	618 aa	Predicted RBP	11.07	□□□□□ -0.64
DENND3-208	ENST00000518668	C11orf68	Q9H3H3	251 aa	Known RBP	11.07	□□□□□ -0.64
DENND3-208	ENST00000518668	MRPL35	Q9NZE8	188 aa	Known RBP	11.07	□□□□□ -0.64
DENND3-208	ENST00000518668	KLF12	Q9Y4X4	402 aa		11.07	□□□□□ -0.64
DENND3-208	ENST00000518668	MAPK1IP1L	Q8NDC0	245 aa		11.07	□□□□□ -0.64
DENND3-208	ENST00000518668	ZNRF2	Q8NHG8	242 aa		11.07	□□□□□ -0.64
DENND3-208	ENST00000518668	C17orf77	Q96MU5	243 aa		11.07	□□□□□ -0.64
DENND3-208	ENST00000518668	DEFB104A	Q8WTQ1	72 aa		11.06	□□□□□ -0.64
DENND3-208	ENST00000518668	TRAV26-2	A0A0B4J265	109 aa		11.06	□□□□□ -0.64
DENND3-208	ENST00000518668	NDUFS7	O75251	213 aa		11.06	□□□□□ -0.64
DENND3-208	ENST00000518668	IGLV2-23	P01705	113 aa		11.06	□□□□□ -0.64
DENND3-208	ENST00000518668	RIPPLY3	P57055	190 aa		11.06	□□□□□ -0.64
DENND3-208	ENST00000518668	IGF2BP2-AS1	Q96M15	143 aa		11.06	□□□□□ -0.64
DENND3-208	ENST00000518668	DOCK7	Q96N67	2140 aa		11.06	□□□□□ -0.64
DENND3-208	ENST00000518668	TRAV12-2	A0A075B6T6	113 aa		11.06	□□□□□ -0.64
DENND3-208	ENST00000518668	WI2-2373I1.2	A0A1W2PRP0	233 aa		11.06	□□□□□ -0.64
DENND3-208	ENST00000518668	ZNF747	Q9BV97	191 aa		11.06	□□□□□ -0.64
DENND3-208	ENST00000518668	C10orf105	Q8TEF2	133 aa		11.06	□□□□□ -0.64
DENND3-208	ENST00000518668	SPANXA1	Q9NS26	97 aa		11.06	□□□□□ -0.64
DENND3-208	ENST00000518668	POLE	Q07864	2286 aa		11.06	□□□□□ -0.64
DENND3-208	ENST00000518668	IGLV2-14	P01704	120 aa		11.05	□□□□□ -0.64
DENND3-208	ENST00000518668	INAFM2	P0DMQ5	153 aa		11.05	□□□□□ -0.64
DENND3-208	ENST00000518668	PATE2	Q6UY27	113 aa		11.05	□□□□□ -0.64
DENND3-208	ENST00000518668	SPANXD	Q9BXN6	97 aa		11.05	□□□□□ -0.64
DENND3-208	ENST00000518668	CTSG	P08311	255 aa		11.05	□□□□□ -0.64
DENND3-208	ENST00000518668	HOXD3	P31249	432 aa	Predicted RBP	11.05	□□□□□ -0.64
DENND3-208	ENST00000518668	ADORA2A-AS1	P86434	159 aa		11.05	□□□□□ -0.64
DENND3-208	ENST00000518668	C11orf1	Q9H5F2	150 aa		11.05	□□□□□ -0.64
DENND3-208	ENST00000518668	LAMTOR3	Q9UHA4	124 aa		11.05	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 64 ms