RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 C2CD4CQ8TF44 421 aa15.68■□□□□ 0.1
VEGFA-217ENST00000518538 SFT2D1Q8WV19 159 aa15.68■□□□□ 0.1
VEGFA-217ENST00000518538 NKX6-2Q9C056 277 aaPredicted RBP15.68■□□□□ 0.1
VEGFA-217ENST00000518538 CYB561D1Q8N8Q1 229 aa15.67■□□□□ 0.1
VEGFA-217ENST00000518538 ATG101Q9BSB4 218 aa15.67■□□□□ 0.1
VEGFA-217ENST00000518538 TIMM8BQ9Y5J9 83 aaPredicted RBP15.67■□□□□ 0.1
VEGFA-217ENST00000518538 RAB5CP51148 216 aa15.66■□□□□ 0.1
VEGFA-217ENST00000518538 DEFB131BA0A096LNP1 70 aa15.65■□□□□ 0.1
VEGFA-217ENST00000518538 LCE6AA0A183 80 aa15.65■□□□□ 0.1
VEGFA-217ENST00000518538 IFNA7P01567 189 aa15.65■□□□□ 0.1
VEGFA-217ENST00000518538 H2AFB1P0C5Y9 115 aa15.65■□□□□ 0.1
VEGFA-217ENST00000518538 DAD1P61803 113 aa15.65■□□□□ 0.1
VEGFA-217ENST00000518538 ANXA2RQ3ZCQ2 193 aa15.65■□□□□ 0.1
VEGFA-217ENST00000518538 Q6AWC8 147 aa15.65■□□□□ 0.1
VEGFA-217ENST00000518538 EIF4E3Q8N5X7 224 aaKnown RBP15.65■□□□□ 0.1
VEGFA-217ENST00000518538 ARL2-SNX15V9GYD0 113 aa15.65■□□□□ 0.1
VEGFA-217ENST00000518538 FBLL1A6NHQ2 334 aaKnown RBP15.64■□□□□ 0.09
VEGFA-217ENST00000518538 RGS13O14921 159 aa15.64■□□□□ 0.09
VEGFA-217ENST00000518538 Q6ZQT7 251 aa15.64■□□□□ 0.09
VEGFA-217ENST00000518538 TMEM75Q8N9X5 138 aa15.64■□□□□ 0.09
VEGFA-217ENST00000518538 TVP23CQ96ET8 276 aa15.64■□□□□ 0.09
VEGFA-217ENST00000518538 SGK494Q96LW2 274 aa15.64■□□□□ 0.09
VEGFA-217ENST00000518538 NDFIP1Q9BT67 221 aa15.64■□□□□ 0.09
VEGFA-217ENST00000518538 TREM1Q9NP99 234 aa15.64■□□□□ 0.09
VEGFA-217ENST00000518538 CBY3A6NI87 242 aa15.63■□□□□ 0.09
VEGFA-217ENST00000518538 IGLV2-11P01706 119 aa15.63■□□□□ 0.09
VEGFA-217ENST00000518538 SULT1A2P50226 295 aa15.63■□□□□ 0.09
VEGFA-217ENST00000518538 FLI1Q01543 452 aaPredicted RBP15.63■□□□□ 0.09
VEGFA-217ENST00000518538 ZNF680Q8NEM1 530 aa15.63■□□□□ 0.09
VEGFA-217ENST00000518538 NOP10Q9NPE3 64 aaKnown RBP15.63■□□□□ 0.09
VEGFA-217ENST00000518538 PSG8Q9UQ74 426 aa15.63■□□□□ 0.09
VEGFA-217ENST00000518538 KMT2CQ8NEZ4 4911 aaKnown RBP15.62■□□□□ 0.09
VEGFA-217ENST00000518538 IGHV1OR15-1A0A075B7D0 117 aa15.62■□□□□ 0.09
VEGFA-217ENST00000518538 SNURFLB1AK76 121 aa15.62■□□□□ 0.09
VEGFA-217ENST00000518538 PEX7O00628 323 aa15.62■□□□□ 0.09
VEGFA-217ENST00000518538 TCTAP57738 103 aa15.62■□□□□ 0.09
VEGFA-217ENST00000518538 HIST1H2BAQ96A08 127 aa15.62■□□□□ 0.09
VEGFA-217ENST00000518538 TCEAL7Q9BRU2 100 aa15.62■□□□□ 0.09
VEGFA-217ENST00000518538 A0A1B0GV50 99 aa15.61■□□□□ 0.09
VEGFA-217ENST00000518538 IGLL5B9A064 214 aa15.61■□□□□ 0.09
VEGFA-217ENST00000518538 F6UZH7 168 aa15.61■□□□□ 0.09
VEGFA-217ENST00000518538 DEFB130BP0DP73 79 aa15.61■□□□□ 0.09
VEGFA-217ENST00000518538 DEFB130AP0DP74 79 aa15.61■□□□□ 0.09
VEGFA-217ENST00000518538 CST9LP1Q5W188 147 aa15.61■□□□□ 0.09
VEGFA-217ENST00000518538 C11orf72Q8NBR9 251 aa15.61■□□□□ 0.09
VEGFA-217ENST00000518538 PAGE4O60829 102 aa15.6■□□□□ 0.09
VEGFA-217ENST00000518538 PPT1P50897 306 aa15.6■□□□□ 0.09
VEGFA-217ENST00000518538 DAZ2Q13117 558 aaKnown RBP15.6■□□□□ 0.09
VEGFA-217ENST00000518538 PRNTQ86SH4 94 aa15.6■□□□□ 0.09
VEGFA-217ENST00000518538 TENM2Q9NT68 2774 aa15.6■□□□□ 0.09
VEGFA-217ENST00000518538 TRAV1-1A0A0B4J248 108 aa15.59■□□□□ 0.09
VEGFA-217ENST00000518538 TRAV21A0A0B4J279 112 aa15.59■□□□□ 0.09
VEGFA-217ENST00000518538 IBA57Q5T440 356 aaKnown RBP15.59■□□□□ 0.09
VEGFA-217ENST00000518538 LINC00479Q96M42 142 aa15.59■□□□□ 0.09
VEGFA-217ENST00000518538 TP53TG3Q9ULZ0 132 aa15.59■□□□□ 0.09
VEGFA-217ENST00000518538 IGHV4-4A0A075B6R2 117 aa15.58■□□□□ 0.08
VEGFA-217ENST00000518538 TRAV34A0A0B4J273 112 aa15.58■□□□□ 0.08
VEGFA-217ENST00000518538 ATP5G3P48201 142 aa15.58■□□□□ 0.08
VEGFA-217ENST00000518538 TCL1AP56279 114 aa15.58■□□□□ 0.08
VEGFA-217ENST00000518538 MUC21Q5SSG8 566 aa15.58■□□□□ 0.08
VEGFA-217ENST00000518538 SAPCD1Q5SSQ6 148 aa15.58■□□□□ 0.08
VEGFA-217ENST00000518538 LINC00612Q8N6U2 182 aa15.58■□□□□ 0.08
VEGFA-217ENST00000518538 C8orf49Q96NF6 230 aa15.58■□□□□ 0.08
VEGFA-217ENST00000518538 GSN-AS1Q9NRJ2 163 aa15.58■□□□□ 0.08
VEGFA-217ENST00000518538 TEX46H3BTG2 121 aa15.57■□□□□ 0.08
VEGFA-217ENST00000518538 HTN3P15516 51 aa15.57■□□□□ 0.08
VEGFA-217ENST00000518538 NKX2-5P52952 324 aaPredicted RBP15.57■□□□□ 0.08
VEGFA-217ENST00000518538 FAM159AQ6UWV7 190 aa15.57■□□□□ 0.08
VEGFA-217ENST00000518538 LINC00476Q8WZB0 136 aa15.57■□□□□ 0.08
VEGFA-217ENST00000518538 APLNQ9ULZ1 77 aa15.57■□□□□ 0.08
VEGFA-217ENST00000518538 TDRG1Q3Y452 100 aa15.56■□□□□ 0.08
VEGFA-217ENST00000518538 SMUG1Q53HV7 270 aa15.56■□□□□ 0.08
VEGFA-217ENST00000518538 Q86TA4 180 aa15.56■□□□□ 0.08
VEGFA-217ENST00000518538 FAM210BQ96KR6 192 aa15.56■□□□□ 0.08
VEGFA-217ENST00000518538 NAGKQ9UJ70 344 aa15.56■□□□□ 0.08
VEGFA-217ENST00000518538 GCGP01275 180 aa15.55■□□□□ 0.08
VEGFA-217ENST00000518538 ATP5G1P05496 136 aa15.55■□□□□ 0.08
VEGFA-217ENST00000518538 ZNF415Q09FC8 603 aa15.55■□□□□ 0.08
VEGFA-217ENST00000518538 FMC1Q96HJ9 113 aa15.55■□□□□ 0.08
VEGFA-217ENST00000518538 MANBALQ9NQG1 85 aa15.55■□□□□ 0.08
VEGFA-217ENST00000518538 KLF12Q9Y4X4 402 aa15.55■□□□□ 0.08
VEGFA-217ENST00000518538 TRGV11A0A075B6L2 103 aa15.54■□□□□ 0.08
VEGFA-217ENST00000518538 GAGE12BA1L429 117 aa15.54■□□□□ 0.08
VEGFA-217ENST00000518538 GAGE7O76087 117 aa15.54■□□□□ 0.08
VEGFA-217ENST00000518538 GAGE12FP0CL80 117 aa15.54■□□□□ 0.08
VEGFA-217ENST00000518538 GAGE12GP0CL81 117 aa15.54■□□□□ 0.08
VEGFA-217ENST00000518538 GAGE12IP0CL82 117 aa15.54■□□□□ 0.08
VEGFA-217ENST00000518538 ZNF80P51504 273 aaPredicted RBP15.54■□□□□ 0.08
VEGFA-217ENST00000518538 CCL20P78556 96 aa15.54■□□□□ 0.08
VEGFA-217ENST00000518538 NDUFAF3Q9BU61 184 aa15.54■□□□□ 0.08
VEGFA-217ENST00000518538 PFN1P07737 140 aaKnown RBP15.53■□□□□ 0.08
VEGFA-217ENST00000518538 AKR1C3P42330 323 aa15.53■□□□□ 0.08
VEGFA-217ENST00000518538 UBE2G1P62253 170 aa15.53■□□□□ 0.08
VEGFA-217ENST00000518538 TMEM183BQ1AE95 376 aa15.53■□□□□ 0.08
VEGFA-217ENST00000518538 Q6ZTI0 123 aa15.53■□□□□ 0.08
VEGFA-217ENST00000518538 TMEM183AQ8IXX5 376 aa15.53■□□□□ 0.08
VEGFA-217ENST00000518538 GNG13Q9P2W3 67 aa15.53■□□□□ 0.08
VEGFA-217ENST00000518538 TRBV6-1A0A0K0K1D8 114 aa15.52■□□□□ 0.08
VEGFA-217ENST00000518538 SPINK4O60575 86 aa15.52■□□□□ 0.08
VEGFA-217ENST00000518538 LY6G6CO95867 125 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms