RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 A0A0G2JNJ9 132 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 SPTY2D1-AS1A0A0U1RR47 76 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 A0A1B0GWA3 101 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 LOC107986453A0A1B0GWG9 222 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 A1L4Q6 167 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 C2orf70A6NJV1 201 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 J3QKU1 62 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 ZIC3O60481 467 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 NHLRC4P0CG21 123 aaPredicted RBP1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 BCL2P10415 239 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 SAMD5Q5TGI4 173 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 C2orf91Q6ZV80 131 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 PRIMA1Q86XR5 153 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 MUSTN1Q8IVN3 82 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 TMEM61Q8N0U2 210 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 STPG4Q8N801 248 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 C7orf33Q8WU49 177 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 TMEM255BQ8WV15 326 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 C18orf12Q96KH6 178 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 CCDC140Q96MF4 163 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 TIMM17AQ99595 171 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 DERL1Q9BUN8 251 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 MLST8Q9BVC4 326 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 CLEC7AQ9BXN2 247 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 VSIRQ9H7M9 311 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 MED20Q9H944 212 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 GPR84Q9NQS5 396 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 Q9UFV3 132 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 CTXND1A0A1B0GTU2 59 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 A0A1W2PPZ6 126 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 OOSP1A8MZH6 123 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 F5H768 121 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 M0R381 172 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 MOSP00540 346 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 TRBV12-3P01733 135 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 APCSP02743 223 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 GLI4P10075 376 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 GATA3P23771 443 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 GPR183P32249 361 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 MPV17P39210 176 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 AWAT1Q58HT5 328 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 ZNF506Q5JVG8 444 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 LCE1DQ5T752 114 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 FAAP20Q6NZ36 180 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 C16orf82Q7Z2V1 217 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 HIST3H2BBQ8N257 126 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 SERP2Q8N6R1 65 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 LY6G5BQ8NDX9 201 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 SSMEM1Q8WWF3 244 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 C10orf35Q96D05 121 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 ZNF837Q96EG3 531 aaPredicted RBP1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 VN1R1Q9GZP7 353 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 WDR54Q9H977 334 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 RETNQ9HD89 108 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 SLC25A10Q9UBX3 287 aaPredicted RBP1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 ERG28Q9UKR5 140 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 TRAV27A0A087WT01 109 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 MARCH11A6NNE9 402 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 FABP5P3A8MUU1 101 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 H3BP45 60 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 RRHO14718 337 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 LEPROTO15243 131 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 TCF21O43680 179 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 HIST1H2BKO60814 126 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 CST7O76096 145 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 CXorf1O96002 111 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 STATHP02808 62 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 HIST1H2BJP06899 126 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 SAA1P0DJI8 122 aaPredicted RBP1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 IAPPP10997 89 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 PDE6GP18545 87 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 PTNP21246 168 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 HIST1H2BOP23527 126 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 HIST1H2BBP33778 126 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 GNG10P50151 68 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 HIST1H2BDP58876 126 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 HIST1H2BCP62807 126 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 KLRD1Q13241 179 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 HIST2H2BEQ16778 126 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 GOLT1AQ6ZVE7 132 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 MRPL52Q86TS9 123 aaKnown RBP1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 FGFBP3Q8TAT2 258 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 TNFRSF14Q92956 283 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 HIST1H2BHQ93079 126 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 RNF183Q96D59 192 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 WDYHV1Q96HA8 205 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 HIST1H2BNQ99877 126 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 HIST1H2BMQ99879 126 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 TMEM222Q9H0R3 208 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 TMEM133Q9H2Q1 129 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 KIR3DX1Q9H7L2 352 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 ST20Q9HBF5 79 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 OTORQ9NRC9 128 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 SPCS1Q9Y6A9 102 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 OVOL1O14753 267 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 ZNF205O95201 554 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 VDAC2P45880 294 aaPredicted RBP1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 PRCDQ00LT1 54 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 WDR38Q5JTN6 314 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms