RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 TMEM41BQ5BJD5 291 aa5.11□□□□□ -1.59
TOPBP1-207ENST00000509162 Q6ZSN1 163 aa5.11□□□□□ -1.59
TOPBP1-207ENST00000509162 OR10G4Q8NGN3 311 aa5.11□□□□□ -1.59
TOPBP1-207ENST00000509162 OR10G9Q8NGN4 311 aa5.11□□□□□ -1.59
TOPBP1-207ENST00000509162 OR10G7Q8NGN6 311 aa5.11□□□□□ -1.59
TOPBP1-207ENST00000509162 RNASE8Q8TDE3 154 aaKnown RBP5.11□□□□□ -1.59
TOPBP1-207ENST00000509162 PHLDA1Q8WV24 401 aaPredicted RBP5.11□□□□□ -1.59
TOPBP1-207ENST00000509162 LINC00476Q8WZB0 136 aa5.11□□□□□ -1.59
TOPBP1-207ENST00000509162 ODF3Q96PU9 254 aa5.11□□□□□ -1.59
TOPBP1-207ENST00000509162 DKK2Q9UBU2 259 aa5.11□□□□□ -1.59
TOPBP1-207ENST00000509162 YTHDF2Q9Y5A9 579 aaKnown RBP5.11□□□□□ -1.59
TOPBP1-207ENST00000509162 TRAV8-1A0A0A6YYK1 113 aa5.1□□□□□ -1.59
TOPBP1-207ENST00000509162 CXorf65A6NEN9 183 aa5.1□□□□□ -1.59
TOPBP1-207ENST00000509162 F5H697 171 aa5.1□□□□□ -1.59
TOPBP1-207ENST00000509162 BCL2L11O43521 198 aa5.1□□□□□ -1.59
TOPBP1-207ENST00000509162 ZNF324O75467 553 aaPredicted RBP5.1□□□□□ -1.59
TOPBP1-207ENST00000509162 GCHFRP30047 84 aa5.1□□□□□ -1.59
TOPBP1-207ENST00000509162 FGF8P55075 233 aaPredicted RBP5.1□□□□□ -1.59
TOPBP1-207ENST00000509162 RHOBP62745 196 aa5.1□□□□□ -1.59
TOPBP1-207ENST00000509162 ACOT6Q3I5F7 207 aaPredicted RBP5.1□□□□□ -1.59
TOPBP1-207ENST00000509162 FAM222AQ5U5X8 452 aa5.1□□□□□ -1.59
TOPBP1-207ENST00000509162 CEMP1Q6PRD7 247 aaPredicted RBP5.1□□□□□ -1.59
TOPBP1-207ENST00000509162 C9orf47Q6ZRZ4 202 aa5.1□□□□□ -1.59
TOPBP1-207ENST00000509162 TCTE3Q8IZS6 198 aa5.1□□□□□ -1.59
TOPBP1-207ENST00000509162 C11orf72Q8NBR9 251 aa5.1□□□□□ -1.59
TOPBP1-207ENST00000509162 C11orf45Q8TAV5 145 aa5.1□□□□□ -1.59
TOPBP1-207ENST00000509162 SCGB1C1Q8TD33 95 aa5.1□□□□□ -1.59
TOPBP1-207ENST00000509162 C1QTNF4Q9BXJ3 329 aa5.1□□□□□ -1.59
TOPBP1-207ENST00000509162 TMPRSS5Q9H3S3 457 aa5.1□□□□□ -1.59
TOPBP1-207ENST00000509162 TRAV12-3A0A0B4J271 114 aa5.09□□□□□ -1.59
TOPBP1-207ENST00000509162 HMSDA8MTL9 139 aa5.09□□□□□ -1.59
TOPBP1-207ENST00000509162 IGLV2-11P01706 119 aa5.09□□□□□ -1.59
TOPBP1-207ENST00000509162 S100A7P31151 101 aa5.09□□□□□ -1.59
TOPBP1-207ENST00000509162 CDKN1BP46527 198 aa5.09□□□□□ -1.59
TOPBP1-207ENST00000509162 EMP1P54849 157 aa5.09□□□□□ -1.59
TOPBP1-207ENST00000509162 RANP62826 216 aaKnown RBP5.09□□□□□ -1.59
TOPBP1-207ENST00000509162 LGALSLQ3ZCW2 172 aaPredicted RBP5.09□□□□□ -1.59
TOPBP1-207ENST00000509162 C9orf62Q8N4C0 152 aa5.09□□□□□ -1.59
TOPBP1-207ENST00000509162 LINC00612Q8N6U2 182 aa5.09□□□□□ -1.59
TOPBP1-207ENST00000509162 LRRC20Q8TCA0 184 aa5.09□□□□□ -1.59
TOPBP1-207ENST00000509162 OTORQ9NRC9 128 aa5.09□□□□□ -1.59
TOPBP1-207ENST00000509162 ZNF492Q9P255 531 aa5.09□□□□□ -1.59
TOPBP1-207ENST00000509162 C11orf21Q9P2W6 132 aa5.09□□□□□ -1.59
TOPBP1-207ENST00000509162 TP53TG3Q9ULZ0 132 aa5.09□□□□□ -1.59
TOPBP1-207ENST00000509162 APLNQ9ULZ1 77 aa5.09□□□□□ -1.59
TOPBP1-207ENST00000509162 GOLT1BQ9Y3E0 138 aa5.09□□□□□ -1.59
TOPBP1-207ENST00000509162 DNAH8Q96JB1 4490 aa5.08□□□□□ -1.6
TOPBP1-207ENST00000509162 KRTAP23-1A1A580 65 aa5.08□□□□□ -1.6
TOPBP1-207ENST00000509162 C7orf71A4D174 169 aa5.08□□□□□ -1.6
TOPBP1-207ENST00000509162 F6UZH7 168 aa5.08□□□□□ -1.6
TOPBP1-207ENST00000509162 AMBPP02760 352 aa5.08□□□□□ -1.6
TOPBP1-207ENST00000509162 TSPOP30536 169 aa5.08□□□□□ -1.6
TOPBP1-207ENST00000509162 ZNF80P51504 273 aaPredicted RBP5.08□□□□□ -1.6
TOPBP1-207ENST00000509162 NUTF2P61970 127 aaKnown RBP5.08□□□□□ -1.6
TOPBP1-207ENST00000509162 PQLC2Q6ZP29 291 aa5.08□□□□□ -1.6
TOPBP1-207ENST00000509162 GOLT1AQ6ZVE7 132 aa5.08□□□□□ -1.6
TOPBP1-207ENST00000509162 TMUB2Q71RG4 321 aa5.08□□□□□ -1.6
TOPBP1-207ENST00000509162 S100A7AQ86SG5 101 aa5.08□□□□□ -1.6
TOPBP1-207ENST00000509162 INO80EQ8NBZ0 244 aaPredicted RBP5.08□□□□□ -1.6
TOPBP1-207ENST00000509162 OR10J6PQ8NGY7 276 aa5.08□□□□□ -1.6
TOPBP1-207ENST00000509162 SGK494Q96LW2 274 aa5.08□□□□□ -1.6
TOPBP1-207ENST00000509162 PPP1R14DQ9NXH3 145 aa5.08□□□□□ -1.6
TOPBP1-207ENST00000509162 RPH3ALQ9UNE2 315 aa5.08□□□□□ -1.6
TOPBP1-207ENST00000509162 RNF24Q9Y225 148 aa5.08□□□□□ -1.6
TOPBP1-207ENST00000509162 PRELID1Q9Y255 219 aa5.08□□□□□ -1.6
TOPBP1-207ENST00000509162 CTXND1A0A1B0GTU2 59 aa5.07□□□□□ -1.6
TOPBP1-207ENST00000509162 GAGE12BA1L429 117 aa5.07□□□□□ -1.6
TOPBP1-207ENST00000509162 MAP1LC3B2A6NCE7 125 aa5.07□□□□□ -1.6
TOPBP1-207ENST00000509162 GAGE12HA6NDE8 117 aa5.07□□□□□ -1.6
TOPBP1-207ENST00000509162 NUPR2A6NF83 97 aa5.07□□□□□ -1.6
TOPBP1-207ENST00000509162 GAGE10A6NGK3 116 aa5.07□□□□□ -1.6
TOPBP1-207ENST00000509162 FAM74A7A6NL05 159 aa5.07□□□□□ -1.6
TOPBP1-207ENST00000509162 HBE1P02100 147 aa5.07□□□□□ -1.6
TOPBP1-207ENST00000509162 LEPP41159 167 aa5.07□□□□□ -1.6
TOPBP1-207ENST00000509162 ATP5G3P48201 142 aa5.07□□□□□ -1.6
TOPBP1-207ENST00000509162 TAS2R45P59539 299 aa5.07□□□□□ -1.6
TOPBP1-207ENST00000509162 TAS2R60P59551 318 aa5.07□□□□□ -1.6
TOPBP1-207ENST00000509162 SERF2P84101 59 aa5.07□□□□□ -1.6
TOPBP1-207ENST00000509162 RRN3P1Q2M238 152 aa5.07□□□□□ -1.6
TOPBP1-207ENST00000509162 STOML3Q8TAV4 291 aa5.07□□□□□ -1.6
TOPBP1-207ENST00000509162 TMED6Q8WW62 240 aa5.07□□□□□ -1.6
TOPBP1-207ENST00000509162 GNPNAT1Q96EK6 184 aaPredicted RBP5.07□□□□□ -1.6
TOPBP1-207ENST00000509162 HYLS1Q96M11 299 aa5.07□□□□□ -1.6
TOPBP1-207ENST00000509162 LINC00479Q96M42 142 aa5.07□□□□□ -1.6
TOPBP1-207ENST00000509162 MAP1LC3BQ9GZQ8 125 aa5.07□□□□□ -1.6
TOPBP1-207ENST00000509162 HSPG2P98160 4391 aa5.07□□□□□ -1.6
TOPBP1-207ENST00000509162 IGHV4-4A0A075B6R2 117 aa5.06□□□□□ -1.6
TOPBP1-207ENST00000509162 BORCS7-ASMTA0A0B4J1R7 106 aa5.06□□□□□ -1.6
TOPBP1-207ENST00000509162 A0A1B0GV50 99 aa5.06□□□□□ -1.6
TOPBP1-207ENST00000509162 RBAKDNA6NC62 111 aa5.06□□□□□ -1.6
TOPBP1-207ENST00000509162 PGPA6NDG6 321 aa5.06□□□□□ -1.6
TOPBP1-207ENST00000509162 SMIM9A6NGZ8 99 aa5.06□□□□□ -1.6
TOPBP1-207ENST00000509162 TAAR5O14804 337 aa5.06□□□□□ -1.6
TOPBP1-207ENST00000509162 JTBO76095 146 aa5.06□□□□□ -1.6
TOPBP1-207ENST00000509162 C1QBP02746 253 aa5.06□□□□□ -1.6
TOPBP1-207ENST00000509162 TCRAP04437 139 aa5.06□□□□□ -1.6
TOPBP1-207ENST00000509162 SLC25A5P05141 298 aaKnown RBP5.06□□□□□ -1.6
TOPBP1-207ENST00000509162 ZNF138P52744 262 aa5.06□□□□□ -1.6
TOPBP1-207ENST00000509162 NKX2-5P52952 324 aaPredicted RBP5.06□□□□□ -1.6
TOPBP1-207ENST00000509162 UBE2G2P60604 165 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms