RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 Q9H3A6 140 aa5.39□□□□□ -1.55
NUP54-204ENST00000506098 OTORQ9NRC9 128 aa5.39□□□□□ -1.55
NUP54-204ENST00000506098 YTHDF2Q9Y5A9 579 aaKnown RBP5.39□□□□□ -1.55
NUP54-204ENST00000506098 TRBV7-9A0A0J9YWB2 115 aa5.38□□□□□ -1.55
NUP54-204ENST00000506098 LOC102723971A0A1B0GUV8 181 aa5.38□□□□□ -1.55
NUP54-204ENST00000506098 PGPA6NDG6 321 aa5.38□□□□□ -1.55
NUP54-204ENST00000506098 RBFOX3A6NFN3 312 aa5.38□□□□□ -1.55
NUP54-204ENST00000506098 OR4C46A6NHA9 309 aa5.38□□□□□ -1.55
NUP54-204ENST00000506098 GGTLC3B5MD39 225 aa5.38□□□□□ -1.55
NUP54-204ENST00000506098 H3BTX0 84 aa5.38□□□□□ -1.55
NUP54-204ENST00000506098 BCL2P10415 239 aa5.38□□□□□ -1.55
NUP54-204ENST00000506098 ID1P41134 155 aa5.38□□□□□ -1.55
NUP54-204ENST00000506098 CMC4P56277 68 aaPredicted RBP5.38□□□□□ -1.55
NUP54-204ENST00000506098 RPL11P62913 178 aaKnown RBP5.38□□□□□ -1.55
NUP54-204ENST00000506098 SUMO1P63165 101 aaKnown RBP5.38□□□□□ -1.55
NUP54-204ENST00000506098 NIT1Q86X76 327 aa5.38□□□□□ -1.55
NUP54-204ENST00000506098 TMEM183AQ8IXX5 376 aa5.38□□□□□ -1.55
NUP54-204ENST00000506098 GBGT1Q8N5D6 347 aa5.38□□□□□ -1.55
NUP54-204ENST00000506098 C16orf92Q96LL3 132 aa5.38□□□□□ -1.55
NUP54-204ENST00000506098 AAMDCQ9H7C9 122 aa5.38□□□□□ -1.55
NUP54-204ENST00000506098 GNG13Q9P2W3 67 aa5.38□□□□□ -1.55
NUP54-204ENST00000506098 SELENOKQ9Y6D0 94 aa5.38□□□□□ -1.55
NUP54-204ENST00000506098 IGKV3-7A0A075B6H7 116 aa5.37□□□□□ -1.55
NUP54-204ENST00000506098 A0A1B0GW15 77 aa5.37□□□□□ -1.55
NUP54-204ENST00000506098 C11orf94C9JXX5 98 aa5.37□□□□□ -1.55
NUP54-204ENST00000506098 AMBPP02760 352 aa5.37□□□□□ -1.55
NUP54-204ENST00000506098 HLA-DMBP28068 263 aa5.37□□□□□ -1.55
NUP54-204ENST00000506098 ATP5G3P48201 142 aa5.37□□□□□ -1.55
NUP54-204ENST00000506098 NDUFA6P56556 154 aa5.37□□□□□ -1.55
NUP54-204ENST00000506098 SNRPD3P62318 126 aaKnown RBP5.37□□□□□ -1.55
NUP54-204ENST00000506098 MEF2BQ02080 365 aaPredicted RBP5.37□□□□□ -1.55
NUP54-204ENST00000506098 EGFEM1PQ0D2K5 195 aa5.37□□□□□ -1.55
NUP54-204ENST00000506098 ICAM4Q14773 271 aa5.37□□□□□ -1.55
NUP54-204ENST00000506098 OXLD1Q5BKU9 147 aa5.37□□□□□ -1.55
NUP54-204ENST00000506098 CDPF1Q6NVV7 123 aa5.37□□□□□ -1.55
NUP54-204ENST00000506098 WFDC3Q8IUB2 231 aa5.37□□□□□ -1.55
NUP54-204ENST00000506098 EXOC3-AS1Q8N2X6 119 aa5.37□□□□□ -1.55
NUP54-204ENST00000506098 FAM24BQ8N5W8 94 aa5.37□□□□□ -1.55
NUP54-204ENST00000506098 C5orf17Q8NAS9 161 aa5.37□□□□□ -1.55
NUP54-204ENST00000506098 ISOC2Q96AB3 205 aa5.37□□□□□ -1.55
NUP54-204ENST00000506098 C20orf173Q96LM9 149 aa5.37□□□□□ -1.55
NUP54-204ENST00000506098 HIST1H2BLQ99880 126 aa5.37□□□□□ -1.55
NUP54-204ENST00000506098 RARRES2Q99969 163 aa5.37□□□□□ -1.55
NUP54-204ENST00000506098 COX11Q9Y6N1 276 aa5.37□□□□□ -1.55
NUP54-204ENST00000506098 URGCP-MRPS24S4R325 110 aa5.37□□□□□ -1.55
NUP54-204ENST00000506098 RBAKDNA6NC62 111 aa5.36□□□□□ -1.55
NUP54-204ENST00000506098 DIRC3C9JPN6 131 aa5.36□□□□□ -1.55
NUP54-204ENST00000506098 TMEM250H0YL14 139 aa5.36□□□□□ -1.55
NUP54-204ENST00000506098 PDE6DO43924 150 aa5.36□□□□□ -1.55
NUP54-204ENST00000506098 SLC25A5P05141 298 aaKnown RBP5.36□□□□□ -1.55
NUP54-204ENST00000506098 ODF3L2Q3SX64 289 aa5.36□□□□□ -1.55
NUP54-204ENST00000506098 SAMD5Q5TGI4 173 aa5.36□□□□□ -1.55
NUP54-204ENST00000506098 CST9LP1Q5W188 147 aa5.36□□□□□ -1.55
NUP54-204ENST00000506098 IGFL4Q6B9Z1 124 aa5.36□□□□□ -1.55
NUP54-204ENST00000506098 RNF182Q8N6D2 247 aa5.36□□□□□ -1.55
NUP54-204ENST00000506098 C11orf52Q96A22 123 aa5.36□□□□□ -1.55
NUP54-204ENST00000506098 EIF5A2Q9GZV4 153 aaKnown RBP5.36□□□□□ -1.55
NUP54-204ENST00000506098 MAP6D1Q9H9H5 199 aa5.36□□□□□ -1.55
NUP54-204ENST00000506098 C19orf73Q9NVV2 129 aa5.36□□□□□ -1.55
NUP54-204ENST00000506098 EPDR1Q9UM22 224 aa5.36□□□□□ -1.55
NUP54-204ENST00000506098 TRAV26-1A0A087WT03 109 aa5.35□□□□□ -1.55
NUP54-204ENST00000506098 C7orf77A4D0Y5 90 aa5.35□□□□□ -1.55
NUP54-204ENST00000506098 A8MTW9 85 aa5.35□□□□□ -1.55
NUP54-204ENST00000506098 ZNF705FA8MVS1 300 aaPredicted RBP5.35□□□□□ -1.55
NUP54-204ENST00000506098 G3V4G9 280 aa5.35□□□□□ -1.55
NUP54-204ENST00000506098 M0R3E3 92 aa5.35□□□□□ -1.55
NUP54-204ENST00000506098 HIST1H2BKO60814 126 aa5.35□□□□□ -1.55
NUP54-204ENST00000506098 TCRAP04437 139 aa5.35□□□□□ -1.55
NUP54-204ENST00000506098 HIST1H2BJP06899 126 aa5.35□□□□□ -1.55
NUP54-204ENST00000506098 SRP19P09132 144 aaKnown RBP5.35□□□□□ -1.55
NUP54-204ENST00000506098 ZNF688P0C7X2 276 aa5.35□□□□□ -1.55
NUP54-204ENST00000506098 FABP4P15090 132 aa5.35□□□□□ -1.55
NUP54-204ENST00000506098 HIST1H2BOP23527 126 aa5.35□□□□□ -1.55
NUP54-204ENST00000506098 HIST1H2BBP33778 126 aa5.35□□□□□ -1.55
NUP54-204ENST00000506098 CSN1S1P47710 185 aa5.35□□□□□ -1.55
NUP54-204ENST00000506098 TFPI2P48307 235 aa5.35□□□□□ -1.55
NUP54-204ENST00000506098 HIST1H2BDP58876 126 aa5.35□□□□□ -1.55
NUP54-204ENST00000506098 HIST1H2BCP62807 126 aa5.35□□□□□ -1.55
NUP54-204ENST00000506098 HERV-K104P63124 156 aa5.35□□□□□ -1.55
NUP54-204ENST00000506098 SRSF3P84103 164 aaKnown RBP5.35□□□□□ -1.55
NUP54-204ENST00000506098 HIST2H2BEQ16778 126 aa5.35□□□□□ -1.55
NUP54-204ENST00000506098 LINC01559Q495D7 138 aa5.35□□□□□ -1.55
NUP54-204ENST00000506098 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.35□□□□□ -1.55
NUP54-204ENST00000506098 CMTM2Q8TAZ6 248 aa5.35□□□□□ -1.55
NUP54-204ENST00000506098 HIST1H2BHQ93079 126 aa5.35□□□□□ -1.55
NUP54-204ENST00000506098 TMEM18Q96B42 140 aa5.35□□□□□ -1.55
NUP54-204ENST00000506098 MRAP2Q96G30 205 aa5.35□□□□□ -1.55
NUP54-204ENST00000506098 IMMP2LQ96T52 175 aa5.35□□□□□ -1.55
NUP54-204ENST00000506098 HIST1H2BNQ99877 126 aa5.35□□□□□ -1.55
NUP54-204ENST00000506098 HIST1H2BMQ99879 126 aa5.35□□□□□ -1.55
NUP54-204ENST00000506098 RPS10P5Q9NQ39 176 aa5.35□□□□□ -1.55
NUP54-204ENST00000506098 NAT8Q9UHE5 227 aa5.35□□□□□ -1.55
NUP54-204ENST00000506098 KLF12Q9Y4X4 402 aa5.35□□□□□ -1.55
NUP54-204ENST00000506098 A0A0J9YX75 114 aa5.34□□□□□ -1.55
NUP54-204ENST00000506098 TRBV6-1A0A0K0K1D8 114 aa5.34□□□□□ -1.55
NUP54-204ENST00000506098 SCO2A0A1W2PP80 73 aa5.34□□□□□ -1.55
NUP54-204ENST00000506098 FBLL1A6NHQ2 334 aaKnown RBP5.34□□□□□ -1.55
NUP54-204ENST00000506098 PRAC2D3DTV9 90 aa5.34□□□□□ -1.55
NUP54-204ENST00000506098 NPIPB6E9PJ23 425 aa5.34□□□□□ -1.55
NUP54-204ENST00000506098 K7EQM0 130 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms