RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 P0DMU3 169 aa13.47□□□□□ -0.25
EPHB4-207ENST00000489808 FAM231AP0DMU4 169 aa13.47□□□□□ -0.25
EPHB4-207ENST00000489808 FAM231CP0DMU5 169 aa13.47□□□□□ -0.25
EPHB4-207ENST00000489808 GNG5P63218 68 aa13.47□□□□□ -0.25
EPHB4-207ENST00000489808 ZNF345Q14585 488 aa13.47□□□□□ -0.25
EPHB4-207ENST00000489808 AKR1C8PQ5T2L2 129 aa13.47□□□□□ -0.25
EPHB4-207ENST00000489808 C11orf72Q8NBR9 251 aa13.47□□□□□ -0.25
EPHB4-207ENST00000489808 ARPC5LQ9BPX5 153 aa13.47□□□□□ -0.25
EPHB4-207ENST00000489808 CTXND1A0A1B0GTU2 59 aa13.46□□□□□ -0.25
EPHB4-207ENST00000489808 SUMO1P63165 101 aaKnown RBP13.46□□□□□ -0.25
EPHB4-207ENST00000489808 TP53TG3Q9ULZ0 132 aa13.46□□□□□ -0.25
EPHB4-207ENST00000489808 EPPK1P58107 5090 aaKnown RBP13.46□□□□□ -0.26
EPHB4-207ENST00000489808 DNAH10Q8IVF4 4471 aa13.45□□□□□ -0.26
EPHB4-207ENST00000489808 A0A0D9SG52 128 aa13.45□□□□□ -0.26
EPHB4-207ENST00000489808 GAGE12BA1L429 117 aa13.45□□□□□ -0.26
EPHB4-207ENST00000489808 GAGE7O76087 117 aa13.45□□□□□ -0.26
EPHB4-207ENST00000489808 GAGE12FP0CL80 117 aa13.45□□□□□ -0.26
EPHB4-207ENST00000489808 GAGE12GP0CL81 117 aa13.45□□□□□ -0.26
EPHB4-207ENST00000489808 GAGE12IP0CL82 117 aa13.45□□□□□ -0.26
EPHB4-207ENST00000489808 Q6AWC8 147 aa13.45□□□□□ -0.26
EPHB4-207ENST00000489808 POM121L12Q8N7R1 296 aa13.45□□□□□ -0.26
EPHB4-207ENST00000489808 C5orf17Q8NAS9 161 aa13.45□□□□□ -0.26
EPHB4-207ENST00000489808 TRAV8-1A0A0A6YYK1 113 aa13.44□□□□□ -0.26
EPHB4-207ENST00000489808 SERTM2A0A1B0GWG4 89 aa13.44□□□□□ -0.26
EPHB4-207ENST00000489808 TCRAP04437 139 aa13.44□□□□□ -0.26
EPHB4-207ENST00000489808 Q6ZTI0 123 aa13.44□□□□□ -0.26
EPHB4-207ENST00000489808 IQCF2Q8IXL9 164 aa13.44□□□□□ -0.26
EPHB4-207ENST00000489808 C15orf53Q8NAA6 179 aa13.44□□□□□ -0.26
EPHB4-207ENST00000489808 TVP23CQ96ET8 276 aa13.44□□□□□ -0.26
EPHB4-207ENST00000489808 EPDR1Q9UM22 224 aa13.44□□□□□ -0.26
EPHB4-207ENST00000489808 KLF12Q9Y4X4 402 aa13.44□□□□□ -0.26
EPHB4-207ENST00000489808 A0A1W2PRE2 83 aa13.43□□□□□ -0.26
EPHB4-207ENST00000489808 TCL1AP56279 114 aa13.43□□□□□ -0.26
EPHB4-207ENST00000489808 IBA57Q5T440 356 aaKnown RBP13.43□□□□□ -0.26
EPHB4-207ENST00000489808 TMPRSS5Q9H3S3 457 aa13.43□□□□□ -0.26
EPHB4-207ENST00000489808 GGTLC3B5MD39 225 aa13.42□□□□□ -0.26
EPHB4-207ENST00000489808 MUC21Q5SSG8 566 aa13.42□□□□□ -0.26
EPHB4-207ENST00000489808 SGK494Q96LW2 274 aa13.42□□□□□ -0.26
EPHB4-207ENST00000489808 TREM1Q9NP99 234 aa13.42□□□□□ -0.26
EPHB4-207ENST00000489808 SPINK4O60575 86 aa13.41□□□□□ -0.26
EPHB4-207ENST00000489808 FGF8P55075 233 aaPredicted RBP13.41□□□□□ -0.26
EPHB4-207ENST00000489808 OR5I1Q13606 314 aa13.41□□□□□ -0.26
EPHB4-207ENST00000489808 C18orf15Q96N68 181 aa13.41□□□□□ -0.26
EPHB4-207ENST00000489808 TRGV1A0A0A0MS02 117 aa13.4□□□□□ -0.26
EPHB4-207ENST00000489808 KANTRA0A1W2PQU2 76 aa13.4□□□□□ -0.26
EPHB4-207ENST00000489808 K7EQM0 130 aa13.4□□□□□ -0.26
EPHB4-207ENST00000489808 BCL2L11O43521 198 aa13.4□□□□□ -0.26
EPHB4-207ENST00000489808 SEC11BP0C7V7 166 aa13.4□□□□□ -0.26
EPHB4-207ENST00000489808 FAM159AQ6UWV7 190 aa13.4□□□□□ -0.26
EPHB4-207ENST00000489808 Q6ZNX1 250 aa13.4□□□□□ -0.26
EPHB4-207ENST00000489808 ZNF471Q9BX82 626 aaPredicted RBP13.4□□□□□ -0.26
EPHB4-207ENST00000489808 PSG8Q9UQ74 426 aa13.4□□□□□ -0.26
EPHB4-207ENST00000489808 TRGV2A0A075B6R0 118 aa13.39□□□□□ -0.27
EPHB4-207ENST00000489808 TRAV21A0A0B4J279 112 aa13.39□□□□□ -0.27
EPHB4-207ENST00000489808 F6UZH7 168 aa13.39□□□□□ -0.27
EPHB4-207ENST00000489808 IGLV2-11P01706 119 aa13.39□□□□□ -0.27
EPHB4-207ENST00000489808 HOXA5P20719 270 aa13.39□□□□□ -0.27
EPHB4-207ENST00000489808 RNF212Q495C1 297 aa13.39□□□□□ -0.27
EPHB4-207ENST00000489808 TMUB2Q71RG4 321 aa13.39□□□□□ -0.27
EPHB4-207ENST00000489808 MDFICQ9P1T7 246 aa13.39□□□□□ -0.27
EPHB4-207ENST00000489808 MAP1LC3B2A6NCE7 125 aa13.38□□□□□ -0.27
EPHB4-207ENST00000489808 NUDT3O95989 172 aa13.38□□□□□ -0.27
EPHB4-207ENST00000489808 FHITP49789 147 aa13.38□□□□□ -0.27
EPHB4-207ENST00000489808 UBE2G2P60604 165 aa13.38□□□□□ -0.27
EPHB4-207ENST00000489808 ZNF415Q09FC8 603 aa13.38□□□□□ -0.27
EPHB4-207ENST00000489808 LGALS9BQ3B8N2 356 aa13.38□□□□□ -0.27
EPHB4-207ENST00000489808 TDRG1Q3Y452 100 aa13.38□□□□□ -0.27
EPHB4-207ENST00000489808 CYB561D1Q8N8Q1 229 aa13.38□□□□□ -0.27
EPHB4-207ENST00000489808 ATG101Q9BSB4 218 aa13.38□□□□□ -0.27
EPHB4-207ENST00000489808 NDFIP1Q9BT67 221 aa13.38□□□□□ -0.27
EPHB4-207ENST00000489808 NKX6-2Q9C056 277 aaPredicted RBP13.38□□□□□ -0.27
EPHB4-207ENST00000489808 MAP1LC3BQ9GZQ8 125 aa13.38□□□□□ -0.27
EPHB4-207ENST00000489808 TRAV26-1A0A087WT03 109 aa13.37□□□□□ -0.27
EPHB4-207ENST00000489808 FBLL1A6NHQ2 334 aaKnown RBP13.37□□□□□ -0.27
EPHB4-207ENST00000489808 FAM74A7A6NL05 159 aa13.37□□□□□ -0.27
EPHB4-207ENST00000489808 UMAD1C9J7I0 102 aa13.37□□□□□ -0.27
EPHB4-207ENST00000489808 EIF5AP63241 154 aaKnown RBP13.37□□□□□ -0.27
EPHB4-207ENST00000489808 FLI1Q01543 452 aaPredicted RBP13.37□□□□□ -0.27
EPHB4-207ENST00000489808 TMEM183BQ1AE95 376 aa13.37□□□□□ -0.27
EPHB4-207ENST00000489808 UBE2DNLQ8IWF7 75 aa13.37□□□□□ -0.27
EPHB4-207ENST00000489808 TMEM183AQ8IXX5 376 aa13.37□□□□□ -0.27
EPHB4-207ENST00000489808 TMEM75Q8N9X5 138 aa13.37□□□□□ -0.27
EPHB4-207ENST00000489808 STOML3Q8TAV4 291 aa13.37□□□□□ -0.27
EPHB4-207ENST00000489808 TRGV11A0A075B6L2 103 aa13.36□□□□□ -0.27
EPHB4-207ENST00000489808 GNRH2O43555 120 aa13.36□□□□□ -0.27
EPHB4-207ENST00000489808 IFNA7P01567 189 aa13.36□□□□□ -0.27
EPHB4-207ENST00000489808 PRNTQ86SH4 94 aa13.36□□□□□ -0.27
EPHB4-207ENST00000489808 TCTE3Q8IZS6 198 aa13.36□□□□□ -0.27
EPHB4-207ENST00000489808 MBD3L1Q8WWY6 194 aa13.36□□□□□ -0.27
EPHB4-207ENST00000489808 LINC00479Q96M42 142 aa13.36□□□□□ -0.27
EPHB4-207ENST00000489808 C8orf49Q96NF6 230 aa13.36□□□□□ -0.27
EPHB4-207ENST00000489808 MRPL16Q9NX20 251 aaKnown RBP13.36□□□□□ -0.27
EPHB4-207ENST00000489808 NAGKQ9UJ70 344 aa13.36□□□□□ -0.27
EPHB4-207ENST00000489808 DNAH2Q9P225 4427 aa13.36□□□□□ -0.27
EPHB4-207ENST00000489808 A0A0J9YY99 117 aa13.35□□□□□ -0.27
EPHB4-207ENST00000489808 PFDN1O60925 122 aa13.35□□□□□ -0.27
EPHB4-207ENST00000489808 ZNF80P51504 273 aaPredicted RBP13.35□□□□□ -0.27
EPHB4-207ENST00000489808 SAPCD1Q5SSQ6 148 aa13.35□□□□□ -0.27
EPHB4-207ENST00000489808 SPXQ9BT56 116 aa13.35□□□□□ -0.27
EPHB4-207ENST00000489808 TRAV34A0A0B4J273 112 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms