RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 GAGE12GP0CL81 117 aa9.47□□□□□ -0.89
CCL28-202ENST00000489442 GAGE12IP0CL82 117 aa9.47□□□□□ -0.89
CCL28-202ENST00000489442 P0DMU3 169 aa9.47□□□□□ -0.89
CCL28-202ENST00000489442 FAM231AP0DMU4 169 aa9.47□□□□□ -0.89
CCL28-202ENST00000489442 FAM231CP0DMU5 169 aa9.47□□□□□ -0.89
CCL28-202ENST00000489442 SUMO1P63165 101 aaKnown RBP9.47□□□□□ -0.89
CCL28-202ENST00000489442 GNG5P63218 68 aa9.47□□□□□ -0.89
CCL28-202ENST00000489442 PRR9Q5T870 116 aa9.47□□□□□ -0.89
CCL28-202ENST00000489442 TMEM88Q6PEY1 159 aa9.47□□□□□ -0.89
CCL28-202ENST00000489442 SSX7Q7RTT5 188 aa9.47□□□□□ -0.89
CCL28-202ENST00000489442 C5orf17Q8NAS9 161 aa9.47□□□□□ -0.89
CCL28-202ENST00000489442 OR11H4Q8NGC9 324 aa9.47□□□□□ -0.89
CCL28-202ENST00000489442 TMED6Q8WW62 240 aa9.47□□□□□ -0.89
CCL28-202ENST00000489442 LINC00467Q9BRT7 94 aa9.47□□□□□ -0.89
CCL28-202ENST00000489442 GSN-AS1Q9NRJ2 163 aa9.47□□□□□ -0.89
CCL28-202ENST00000489442 KMT2AQ03164 3969 aa9.47□□□□□ -0.89
CCL28-202ENST00000489442 SERTM2A0A1B0GWG4 89 aa9.46□□□□□ -0.9
CCL28-202ENST00000489442 PFDN1O60925 122 aa9.46□□□□□ -0.9
CCL28-202ENST00000489442 ANXA2RQ3ZCQ2 193 aa9.46□□□□□ -0.9
CCL28-202ENST00000489442 UBE2DNLQ8IWF7 75 aa9.46□□□□□ -0.9
CCL28-202ENST00000489442 SUN5Q8TC36 379 aa9.46□□□□□ -0.9
CCL28-202ENST00000489442 NDFIP1Q9BT67 221 aa9.46□□□□□ -0.9
CCL28-202ENST00000489442 ZNF471Q9BX82 626 aaPredicted RBP9.46□□□□□ -0.9
CCL28-202ENST00000489442 TREM1Q9NP99 234 aa9.46□□□□□ -0.9
CCL28-202ENST00000489442 TRAV8-1A0A0A6YYK1 113 aa9.45□□□□□ -0.9
CCL28-202ENST00000489442 FGF8P55075 233 aaPredicted RBP9.45□□□□□ -0.9
CCL28-202ENST00000489442 EIF5AP63241 154 aaKnown RBP9.45□□□□□ -0.9
CCL28-202ENST00000489442 DAZ2Q13117 558 aaKnown RBP9.45□□□□□ -0.9
CCL28-202ENST00000489442 ZNF726P1Q15940 193 aa9.45□□□□□ -0.9
CCL28-202ENST00000489442 MUC21Q5SSG8 566 aa9.45□□□□□ -0.9
CCL28-202ENST00000489442 FAM159AQ6UWV7 190 aa9.45□□□□□ -0.9
CCL28-202ENST00000489442 Q6ZQT7 251 aa9.45□□□□□ -0.9
CCL28-202ENST00000489442 STOML3Q8TAV4 291 aa9.45□□□□□ -0.9
CCL28-202ENST00000489442 SGK494Q96LW2 274 aa9.45□□□□□ -0.9
CCL28-202ENST00000489442 TMPRSS5Q9H3S3 457 aa9.45□□□□□ -0.9
CCL28-202ENST00000489442 TRGV2A0A075B6R0 118 aa9.44□□□□□ -0.9
CCL28-202ENST00000489442 TRGV1A0A0A0MS02 117 aa9.44□□□□□ -0.9
CCL28-202ENST00000489442 A0A1W2PRE2 83 aa9.44□□□□□ -0.9
CCL28-202ENST00000489442 MAP1LC3B2A6NCE7 125 aa9.44□□□□□ -0.9
CCL28-202ENST00000489442 BCL2L11O43521 198 aa9.44□□□□□ -0.9
CCL28-202ENST00000489442 IFNA7P01567 189 aa9.44□□□□□ -0.9
CCL28-202ENST00000489442 TCRAP04437 139 aa9.44□□□□□ -0.9
CCL28-202ENST00000489442 UBE2G2P60604 165 aa9.44□□□□□ -0.9
CCL28-202ENST00000489442 OR5I1Q13606 314 aa9.44□□□□□ -0.9
CCL28-202ENST00000489442 Q6ZTI0 123 aa9.44□□□□□ -0.9
CCL28-202ENST00000489442 C15orf53Q8NAA6 179 aa9.44□□□□□ -0.9
CCL28-202ENST00000489442 MAP1LC3BQ9GZQ8 125 aa9.44□□□□□ -0.9
CCL28-202ENST00000489442 NAGKQ9UJ70 344 aa9.44□□□□□ -0.9
CCL28-202ENST00000489442 TP53TG3Q9ULZ0 132 aa9.44□□□□□ -0.9
CCL28-202ENST00000489442 EPDR1Q9UM22 224 aa9.44□□□□□ -0.9
CCL28-202ENST00000489442 VPS13DQ5THJ4 4388 aa9.44□□□□□ -0.9
CCL28-202ENST00000489442 NACAE9PAV3 2078 aa9.44□□□□□ -0.9
CCL28-202ENST00000489442 GGTLC3B5MD39 225 aa9.43□□□□□ -0.9
CCL28-202ENST00000489442 NUDT3O95989 172 aa9.43□□□□□ -0.9
CCL28-202ENST00000489442 SEC11BP0C7V7 166 aa9.43□□□□□ -0.9
CCL28-202ENST00000489442 TCL1AP56279 114 aa9.43□□□□□ -0.9
CCL28-202ENST00000489442 ZNF415Q09FC8 603 aa9.43□□□□□ -0.9
CCL28-202ENST00000489442 IBA57Q5T440 356 aaKnown RBP9.43□□□□□ -0.9
CCL28-202ENST00000489442 Q6AWC8 147 aa9.43□□□□□ -0.9
CCL28-202ENST00000489442 TMUB2Q71RG4 321 aa9.43□□□□□ -0.9
CCL28-202ENST00000489442 POM121L12Q8N7R1 296 aa9.43□□□□□ -0.9
CCL28-202ENST00000489442 CYB561D1Q8N8Q1 229 aa9.43□□□□□ -0.9
CCL28-202ENST00000489442 C11orf72Q8NBR9 251 aa9.43□□□□□ -0.9
CCL28-202ENST00000489442 KLF12Q9Y4X4 402 aa9.43□□□□□ -0.9
CCL28-202ENST00000489442 MUC4Q99102 2169 aa9.43□□□□□ -0.9
CCL28-202ENST00000489442 TRAV21A0A0B4J279 112 aa9.42□□□□□ -0.9
CCL28-202ENST00000489442 UMAD1C9J7I0 102 aa9.42□□□□□ -0.9
CCL28-202ENST00000489442 F6UZH7 168 aa9.42□□□□□ -0.9
CCL28-202ENST00000489442 TMEM183BQ1AE95 376 aa9.42□□□□□ -0.9
CCL28-202ENST00000489442 PRNTQ86SH4 94 aa9.42□□□□□ -0.9
CCL28-202ENST00000489442 TMEM183AQ8IXX5 376 aa9.42□□□□□ -0.9
CCL28-202ENST00000489442 LINC00612Q8N6U2 182 aa9.42□□□□□ -0.9
CCL28-202ENST00000489442 FAM213BQ8TBF2 198 aa9.42□□□□□ -0.9
CCL28-202ENST00000489442 ATG101Q9BSB4 218 aa9.42□□□□□ -0.9
CCL28-202ENST00000489442 NKX6-2Q9C056 277 aaPredicted RBP9.42□□□□□ -0.9
CCL28-202ENST00000489442 PSG8Q9UQ74 426 aa9.42□□□□□ -0.9
CCL28-202ENST00000489442 TRGV11A0A075B6L2 103 aa9.41□□□□□ -0.9
CCL28-202ENST00000489442 FBLL1A6NHQ2 334 aaKnown RBP9.41□□□□□ -0.9
CCL28-202ENST00000489442 TPT1P13693 172 aaKnown RBP9.41□□□□□ -0.9
CCL28-202ENST00000489442 FHITP49789 147 aa9.41□□□□□ -0.9
CCL28-202ENST00000489442 PPT1P50897 306 aa9.41□□□□□ -0.9
CCL28-202ENST00000489442 FLI1Q01543 452 aaPredicted RBP9.41□□□□□ -0.9
CCL28-202ENST00000489442 ZFP69Q49AA0 526 aa9.41□□□□□ -0.9
CCL28-202ENST00000489442 Q6ZNX1 250 aa9.41□□□□□ -0.9
CCL28-202ENST00000489442 TVP23CQ96ET8 276 aa9.41□□□□□ -0.9
CCL28-202ENST00000489442 hCG_2014768A0A024R1R8 64 aa9.4□□□□□ -0.9
CCL28-202ENST00000489442 SPINK4O60575 86 aa9.4□□□□□ -0.9
CCL28-202ENST00000489442 CST9LP1Q5W188 147 aa9.4□□□□□ -0.9
CCL28-202ENST00000489442 TCTE3Q8IZS6 198 aa9.4□□□□□ -0.9
CCL28-202ENST00000489442 TMEM75Q8N9X5 138 aa9.4□□□□□ -0.9
CCL28-202ENST00000489442 SFT2D1Q8WV19 159 aa9.4□□□□□ -0.9
CCL28-202ENST00000489442 TRAV26-1A0A087WT03 109 aa9.39□□□□□ -0.91
CCL28-202ENST00000489442 A0A0J9YY99 117 aa9.39□□□□□ -0.91
CCL28-202ENST00000489442 A0A1B0GV50 99 aa9.39□□□□□ -0.91
CCL28-202ENST00000489442 FAM74A7A6NL05 159 aa9.39□□□□□ -0.91
CCL28-202ENST00000489442 LGALS9BQ3B8N2 356 aa9.39□□□□□ -0.91
CCL28-202ENST00000489442 RNF212Q495C1 297 aa9.39□□□□□ -0.91
CCL28-202ENST00000489442 SMUG1Q53HV7 270 aa9.39□□□□□ -0.91
CCL28-202ENST00000489442 SAPCD1Q5SSQ6 148 aa9.39□□□□□ -0.91
CCL28-202ENST00000489442 KCNS1Q96KK3 526 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms