RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 PARP12Q9H0J9 701 aaKnown RBP2.25□□□□□ -2.05
GPNMB-212ENST00000487890 LPAR5Q9H1C0 372 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 RNASE7Q9H1E1 156 aaKnown RBP2.25□□□□□ -2.05
GPNMB-212ENST00000487890 OR2D2Q9H210 308 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 IFI27L2Q9H2X8 130 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 METTL1Q9UBP6 276 aaKnown RBP2.25□□□□□ -2.05
GPNMB-212ENST00000487890 HSPB8Q9UJY1 196 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 TNFSF18Q9UNG2 199 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 WASHC3Q9Y3C0 194 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 U3KQ87 197 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 U3KQK5 164 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 CSMD3Q7Z407 3707 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 DNAH9Q9NYC9 4486 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 IGHV3-74A0A0B4J1X5 117 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 C20orf202A1L168 122 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 TMEM14DPA8MWL7 114 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 H0Y9J4 135 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 H0YJW9 148 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 PDCD5O14737 125 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 YPEL1O60688 119 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 NAPSAO96009 420 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 CA2P00918 260 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 IGKV1-16P04430 117 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 LGALS1P09382 135 aaKnown RBP2.24□□□□□ -2.05
GPNMB-212ENST00000487890 SCTP09683 121 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 RPL7P18124 248 aaKnown RBP2.24□□□□□ -2.05
GPNMB-212ENST00000487890 PSMB8P28062 276 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 TSPOP30536 169 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 RPS10P46783 165 aaKnown RBP2.24□□□□□ -2.05
GPNMB-212ENST00000487890 PIGPP57054 158 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 DEFA3P59666 94 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 RPS20P60866 119 aaKnown RBP2.24□□□□□ -2.05
GPNMB-212ENST00000487890 GNG5P63218 68 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 FABP5Q01469 135 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 BAXQ07812 192 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 BTN1A1Q13410 526 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 FXYD3Q14802 87 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 ACOT6Q3I5F7 207 aaPredicted RBP2.24□□□□□ -2.05
GPNMB-212ENST00000487890 ORMDL2Q53FV1 153 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 ZNF660Q6AZW8 331 aaPredicted RBP2.24□□□□□ -2.05
GPNMB-212ENST00000487890 LAMTOR1Q6IAA8 161 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 IZUMO2Q6UXV1 221 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 ZNF833PQ6ZTB9 187 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 C9orf62Q8N4C0 152 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 FAM24BQ8N5W8 94 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 OR1S1Q8NH92 325 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 YPEL2Q96QA6 119 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 OR4C12Q96R67 309 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 MGLLQ99685 303 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 PDCD10Q9BUL8 212 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 CHAC1Q9BUX1 264 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 SMIM3Q9BZL3 60 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 ATG5Q9H1Y0 275 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 VSIRQ9H7M9 311 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 VAX2Q9UIW0 290 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 RAB22AQ9UL26 194 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 LSM2Q9Y333 95 aaKnown RBP2.24□□□□□ -2.05
GPNMB-212ENST00000487890 SMAD5-AS1Q9Y6J3 95 aa2.24□□□□□ -2.05
GPNMB-212ENST00000487890 KMT2CQ8NEZ4 4911 aaKnown RBP2.23□□□□□ -2.05
GPNMB-212ENST00000487890 TRBV6-6A0A0A6YYG2 114 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 IFITM5A6NNB3 132 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 I3L521 148 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 M0R143 59 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 GGCTO75223 188 aaKnown RBP2.23□□□□□ -2.05
GPNMB-212ENST00000487890 YIF1AO95070 293 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 NDUFA3O95167 84 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 OR5AL1P0C617 328 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 TLX1NBP0CAT3 122 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 SPNP16150 400 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 HIST1H1DP16402 221 aaKnown RBP2.23□□□□□ -2.05
GPNMB-212ENST00000487890 AZU1P20160 251 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 CRHBPP24387 322 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 INSL3P51460 131 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 SYNJ2BPP57105 145 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 QRFPP83859 136 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 HIST1H1AQ02539 215 aaPredicted RBP2.23□□□□□ -2.05
GPNMB-212ENST00000487890 RBMY1FQ15415 496 aaKnown RBP2.23□□□□□ -2.05
GPNMB-212ENST00000487890 VMA21Q3ZAQ7 101 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 DNLZQ5SXM8 178 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 C1orf194Q5T5A4 169 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 ZNF880Q6PDB4 577 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 TEX261Q6UWH6 196 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 TOMM20LQ6UXN7 152 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 TMEM91Q6ZNR0 172 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 FA2HQ7L5A8 372 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 NEGR1Q7Z3B1 354 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 ZNF429Q86V71 674 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 PDPNQ86YL7 162 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 BAP18Q8IXM2 172 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 TCTEX1D1Q8N7M0 179 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.23□□□□□ -2.05
GPNMB-212ENST00000487890 MCFD2Q8NI22 146 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 DYNLRB2Q8TF09 96 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 SRSF12Q8WXF0 261 aaKnown RBP2.23□□□□□ -2.05
GPNMB-212ENST00000487890 HIST1H2BAQ96A08 127 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 GPR82Q96P67 336 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 TP53RKQ96S44 253 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 TIMM17AQ99595 171 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 SAMD10Q9BYL1 202 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 Q9H521 79 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms