RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 GOLT1AQ6ZVE7 132 aa12.35□□□□□ -0.43
COL6A1-204ENST00000486023 LINC00612Q8N6U2 182 aa12.35□□□□□ -0.43
COL6A1-204ENST00000486023 C11orf72Q8NBR9 251 aa12.35□□□□□ -0.43
COL6A1-204ENST00000486023 OR2T35Q8NGX2 323 aa12.35□□□□□ -0.43
COL6A1-204ENST00000486023 NAGKQ9UJ70 344 aa12.35□□□□□ -0.43
COL6A1-204ENST00000486023 IGHV3-53P01767 116 aa12.34□□□□□ -0.43
COL6A1-204ENST00000486023 LGALS9BQ3B8N2 356 aa12.34□□□□□ -0.43
COL6A1-204ENST00000486023 RPL7L1Q6DKI1 246 aaKnown RBP12.34□□□□□ -0.43
COL6A1-204ENST00000486023 RAB24Q969Q5 203 aa12.34□□□□□ -0.43
COL6A1-204ENST00000486023 SGK494Q96LW2 274 aa12.34□□□□□ -0.43
COL6A1-204ENST00000486023 LINC00467Q9BRT7 94 aa12.34□□□□□ -0.43
COL6A1-204ENST00000486023 MRPL16Q9NX20 251 aaKnown RBP12.34□□□□□ -0.43
COL6A1-204ENST00000486023 PSMG3Q9BT73 122 aaPredicted RBP12.33□□□□□ -0.44
COL6A1-204ENST00000486023 TRAV8-1A0A0A6YYK1 113 aa12.32□□□□□ -0.44
COL6A1-204ENST00000486023 BORCS7-ASMTA0A0B4J1R7 106 aa12.32□□□□□ -0.44
COL6A1-204ENST00000486023 RNF222A6NCQ9 220 aa12.32□□□□□ -0.44
COL6A1-204ENST00000486023 PRSS29PA6NIE9 313 aa12.32□□□□□ -0.44
COL6A1-204ENST00000486023 MBP02144 154 aa12.32□□□□□ -0.44
COL6A1-204ENST00000486023 STAG3L2P0CL84 134 aa12.32□□□□□ -0.44
COL6A1-204ENST00000486023 STAG3L3P0CL85 134 aa12.32□□□□□ -0.44
COL6A1-204ENST00000486023 TCL1AP56279 114 aa12.32□□□□□ -0.44
COL6A1-204ENST00000486023 FAM159AQ6UWV7 190 aa12.32□□□□□ -0.44
COL6A1-204ENST00000486023 SSX7Q7RTT5 188 aa12.32□□□□□ -0.44
COL6A1-204ENST00000486023 OR2G3Q8NGZ4 309 aa12.32□□□□□ -0.44
COL6A1-204ENST00000486023 ASB13Q8WXK3 278 aa12.32□□□□□ -0.44
COL6A1-204ENST00000486023 ACTR3CQ9C0K3 210 aaPredicted RBP12.32□□□□□ -0.44
COL6A1-204ENST00000486023 LINC00588Q9Y4M8 146 aa12.32□□□□□ -0.44
COL6A1-204ENST00000486023 DNAH17Q9UFH2 4485 aa12.31□□□□□ -0.44
COL6A1-204ENST00000486023 F6UZH7 168 aa12.31□□□□□ -0.44
COL6A1-204ENST00000486023 SMLR1H3BR10 107 aa12.31□□□□□ -0.44
COL6A1-204ENST00000486023 RTL8CO15255 209 aa12.31□□□□□ -0.44
COL6A1-204ENST00000486023 SPINK4O60575 86 aa12.31□□□□□ -0.44
COL6A1-204ENST00000486023 GCHFRP30047 84 aa12.31□□□□□ -0.44
COL6A1-204ENST00000486023 SERF2P84101 59 aa12.31□□□□□ -0.44
COL6A1-204ENST00000486023 ZNF415Q09FC8 603 aa12.31□□□□□ -0.44
COL6A1-204ENST00000486023 TMEM183BQ1AE95 376 aa12.31□□□□□ -0.44
COL6A1-204ENST00000486023 LINC00336Q6ZUF6 198 aa12.31□□□□□ -0.44
COL6A1-204ENST00000486023 TMEM183AQ8IXX5 376 aa12.31□□□□□ -0.44
COL6A1-204ENST00000486023 MDFICQ9P1T7 246 aa12.31□□□□□ -0.44
COL6A1-204ENST00000486023 TNFSF18Q9UNG2 199 aa12.31□□□□□ -0.44
COL6A1-204ENST00000486023 FAT2Q9NYQ8 4349 aa12.31□□□□□ -0.44
COL6A1-204ENST00000486023 TRBV7-9A0A0J9YWB2 115 aa12.3□□□□□ -0.44
COL6A1-204ENST00000486023 ARPC5O15511 151 aa12.3□□□□□ -0.44
COL6A1-204ENST00000486023 IBA57Q5T440 356 aaKnown RBP12.3□□□□□ -0.44
COL6A1-204ENST00000486023 TREM1Q9NP99 234 aa12.3□□□□□ -0.44
COL6A1-204ENST00000486023 FAM3BP58499 235 aaPredicted RBP12.29□□□□□ -0.44
COL6A1-204ENST00000486023 SUMO1P63165 101 aaKnown RBP12.29□□□□□ -0.44
COL6A1-204ENST00000486023 C1orf134Q5TEV5 83 aa12.29□□□□□ -0.44
COL6A1-204ENST00000486023 Q6ZR54 194 aa12.29□□□□□ -0.44
COL6A1-204ENST00000486023 ZNRF2Q8NHG8 242 aa12.29□□□□□ -0.44
COL6A1-204ENST00000486023 GNRH2O43555 120 aa12.28□□□□□ -0.44
COL6A1-204ENST00000486023 CXorf1O96002 111 aa12.28□□□□□ -0.44
COL6A1-204ENST00000486023 SOHLH1Q5JUK2 328 aa12.28□□□□□ -0.44
COL6A1-204ENST00000486023 Q6AWC8 147 aa12.28□□□□□ -0.44
COL6A1-204ENST00000486023 ST6GAL2Q96JF0 529 aa12.28□□□□□ -0.44
COL6A1-204ENST00000486023 LENEPQ9Y5L5 61 aa12.28□□□□□ -0.44
COL6A1-204ENST00000486023 HECTD4Q9Y4D8 3996 aa12.28□□□□□ -0.44
COL6A1-204ENST00000486023 ESRGQ1W209 222 aa12.27□□□□□ -0.45
COL6A1-204ENST00000486023 TMED6Q8WW62 240 aa12.27□□□□□ -0.45
COL6A1-204ENST00000486023 TVP23CQ96ET8 276 aa12.27□□□□□ -0.45
COL6A1-204ENST00000486023 VSIG2Q96IQ7 327 aa12.27□□□□□ -0.45
COL6A1-204ENST00000486023 NDFIP1Q9BT67 221 aa12.27□□□□□ -0.45
COL6A1-204ENST00000486023 TMEM167BQ9NRX6 74 aa12.27□□□□□ -0.45
COL6A1-204ENST00000486023 TRGV11A0A075B6L2 103 aa12.26□□□□□ -0.45
COL6A1-204ENST00000486023 TRAV21A0A0B4J279 112 aa12.26□□□□□ -0.45
COL6A1-204ENST00000486023 NBDYA0A0U1RRE5 68 aa12.26□□□□□ -0.45
COL6A1-204ENST00000486023 K7EQM0 130 aa12.26□□□□□ -0.45
COL6A1-204ENST00000486023 PAX4O43316 350 aa12.26□□□□□ -0.45
COL6A1-204ENST00000486023 TCRAP04437 139 aa12.26□□□□□ -0.45
COL6A1-204ENST00000486023 UBE2G2P60604 165 aa12.26□□□□□ -0.45
COL6A1-204ENST00000486023 AKR1C8PQ5T2L2 129 aa12.26□□□□□ -0.45
COL6A1-204ENST00000486023 PRNTQ86SH4 94 aa12.26□□□□□ -0.45
COL6A1-204ENST00000486023 C5orf17Q8NAS9 161 aa12.26□□□□□ -0.45
COL6A1-204ENST00000486023 C8orf49Q96NF6 230 aa12.26□□□□□ -0.45
COL6A1-204ENST00000486023 Q9H8V8 135 aa12.26□□□□□ -0.45
COL6A1-204ENST00000486023 A0A096LPF7 62 aa12.25□□□□□ -0.45
COL6A1-204ENST00000486023 G3V3Q6 166 aa12.25□□□□□ -0.45
COL6A1-204ENST00000486023 SFTA3P0C7M3 94 aa12.25□□□□□ -0.45
COL6A1-204ENST00000486023 FGF8P55075 233 aaPredicted RBP12.25□□□□□ -0.45
COL6A1-204ENST00000486023 EPDR1Q9UM22 224 aa12.25□□□□□ -0.45
COL6A1-204ENST00000486023 PSG8Q9UQ74 426 aa12.25□□□□□ -0.45
COL6A1-204ENST00000486023 TRGV4A0A0C4DH28 118 aa12.24□□□□□ -0.45
COL6A1-204ENST00000486023 IFNA7P01567 189 aa12.24□□□□□ -0.45
COL6A1-204ENST00000486023 ZNF726P1Q15940 193 aa12.24□□□□□ -0.45
COL6A1-204ENST00000486023 ARL6IP6Q8N6S5 226 aa12.24□□□□□ -0.45
COL6A1-204ENST00000486023 C18orf15Q96N68 181 aa12.24□□□□□ -0.45
COL6A1-204ENST00000486023 HHLA3Q9XRX5 114 aa12.24□□□□□ -0.45
COL6A1-204ENST00000486023 CTXND1A0A1B0GTU2 59 aa12.23□□□□□ -0.45
COL6A1-204ENST00000486023 GGTLC3B5MD39 225 aa12.23□□□□□ -0.45
COL6A1-204ENST00000486023 H3BNG1 76 aa12.23□□□□□ -0.45
COL6A1-204ENST00000486023 TAAR5O14804 337 aa12.23□□□□□ -0.45
COL6A1-204ENST00000486023 SUN5Q8TC36 379 aa12.23□□□□□ -0.45
COL6A1-204ENST00000486023 SPXQ9BT56 116 aa12.23□□□□□ -0.45
COL6A1-204ENST00000486023 SDF2L1Q9HCN8 221 aa12.23□□□□□ -0.45
COL6A1-204ENST00000486023 NACAE9PAV3 2078 aa12.22□□□□□ -0.45
COL6A1-204ENST00000486023 TRAV34A0A0B4J273 112 aa12.22□□□□□ -0.45
COL6A1-204ENST00000486023 SERTM2A0A1B0GWG4 89 aa12.22□□□□□ -0.45
COL6A1-204ENST00000486023 GCGP01275 180 aa12.22□□□□□ -0.45
COL6A1-204ENST00000486023 TYMSP04818 313 aa12.22□□□□□ -0.45
COL6A1-204ENST00000486023 FLI1Q01543 452 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms