RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 C7orf71A4D174 169 aa4.96□□□□□ -1.62
BRCA1-215ENST00000478531 SMIM9A6NGZ8 99 aa4.96□□□□□ -1.62
BRCA1-215ENST00000478531 UMAD1C9J7I0 102 aa4.96□□□□□ -1.62
BRCA1-215ENST00000478531 GPX1P07203 203 aa4.96□□□□□ -1.62
BRCA1-215ENST00000478531 RNASE4P34096 147 aaKnown RBP4.96□□□□□ -1.62
BRCA1-215ENST00000478531 ZNF138P52744 262 aa4.96□□□□□ -1.62
BRCA1-215ENST00000478531 NKX2-5P52952 324 aaPredicted RBP4.96□□□□□ -1.62
BRCA1-215ENST00000478531 TMEM256Q8N2U0 113 aa4.96□□□□□ -1.62
BRCA1-215ENST00000478531 C9orf62Q8N4C0 152 aa4.96□□□□□ -1.62
BRCA1-215ENST00000478531 SFT2D1Q8WV19 159 aa4.96□□□□□ -1.62
BRCA1-215ENST00000478531 SGK494Q96LW2 274 aa4.96□□□□□ -1.62
BRCA1-215ENST00000478531 NIPSNAP3BQ9BS92 247 aa4.96□□□□□ -1.62
BRCA1-215ENST00000478531 YTHDF2Q9Y5A9 579 aaKnown RBP4.96□□□□□ -1.62
BRCA1-215ENST00000478531 SACSQ9NZJ4 4579 aa4.95□□□□□ -1.62
BRCA1-215ENST00000478531 TMEM189A5PLL7 270 aa4.95□□□□□ -1.62
BRCA1-215ENST00000478531 RBAKDNA6NC62 111 aa4.95□□□□□ -1.62
BRCA1-215ENST00000478531 AZU1P20160 251 aa4.95□□□□□ -1.62
BRCA1-215ENST00000478531 PRR9Q5T870 116 aa4.95□□□□□ -1.62
BRCA1-215ENST00000478531 FAM222AQ5U5X8 452 aa4.95□□□□□ -1.62
BRCA1-215ENST00000478531 C5orf17Q8NAS9 161 aa4.95□□□□□ -1.62
BRCA1-215ENST00000478531 ZNF492Q9P255 531 aa4.95□□□□□ -1.62
BRCA1-215ENST00000478531 DNAH1Q9P2D7 4330 aa4.95□□□□□ -1.62
BRCA1-215ENST00000478531 RYR3Q15413 4870 aa4.95□□□□□ -1.62
BRCA1-215ENST00000478531 NUPR2A6NF83 97 aa4.95□□□□□ -1.62
BRCA1-215ENST00000478531 KLLNB2CW77 178 aa4.95□□□□□ -1.62
BRCA1-215ENST00000478531 H7BYZ3 331 aa4.95□□□□□ -1.62
BRCA1-215ENST00000478531 IFNA7P01567 189 aa4.95□□□□□ -1.62
BRCA1-215ENST00000478531 TAS2R60P59551 318 aa4.95□□□□□ -1.62
BRCA1-215ENST00000478531 Q6ZTC4 211 aa4.95□□□□□ -1.62
BRCA1-215ENST00000478531 SLC51BQ86UW2 128 aa4.95□□□□□ -1.62
BRCA1-215ENST00000478531 ZFAND2AQ8N6M9 145 aa4.95□□□□□ -1.62
BRCA1-215ENST00000478531 PHLDA1Q8WV24 401 aaPredicted RBP4.95□□□□□ -1.62
BRCA1-215ENST00000478531 FAM19A4Q96LR4 140 aa4.95□□□□□ -1.62
BRCA1-215ENST00000478531 TRAV34A0A0B4J273 112 aa4.94□□□□□ -1.62
BRCA1-215ENST00000478531 A0A1W2PRE2 83 aa4.94□□□□□ -1.62
BRCA1-215ENST00000478531 FAM74A7A6NL05 159 aa4.94□□□□□ -1.62
BRCA1-215ENST00000478531 F6UZH7 168 aa4.94□□□□□ -1.62
BRCA1-215ENST00000478531 K7EQM0 130 aa4.94□□□□□ -1.62
BRCA1-215ENST00000478531 TCRAP04437 139 aa4.94□□□□□ -1.62
BRCA1-215ENST00000478531 H2AFB1P0C5Y9 115 aa4.94□□□□□ -1.62
BRCA1-215ENST00000478531 SPART-AS1P0CW21 52 aa4.94□□□□□ -1.62
BRCA1-215ENST00000478531 CRISP2P16562 243 aa4.94□□□□□ -1.62
BRCA1-215ENST00000478531 CST9LP1Q5W188 147 aa4.94□□□□□ -1.62
BRCA1-215ENST00000478531 EIF5AL1Q6IS14 154 aaKnown RBP4.94□□□□□ -1.62
BRCA1-215ENST00000478531 DPPA3Q6W0C5 159 aa4.94□□□□□ -1.62
BRCA1-215ENST00000478531 Q6ZQT7 251 aa4.94□□□□□ -1.62
BRCA1-215ENST00000478531 C16orf74Q96GX8 76 aa4.94□□□□□ -1.62
BRCA1-215ENST00000478531 C20orf144Q9BQM9 153 aa4.94□□□□□ -1.62
BRCA1-215ENST00000478531 DKK2Q9UBU2 259 aa4.94□□□□□ -1.62
BRCA1-215ENST00000478531 CBY3A6NI87 242 aa4.93□□□□□ -1.62
BRCA1-215ENST00000478531 RGS13O14921 159 aa4.93□□□□□ -1.62
BRCA1-215ENST00000478531 TNFRSF6BO95407 300 aa4.93□□□□□ -1.62
BRCA1-215ENST00000478531 C12orf74Q32Q52 190 aa4.93□□□□□ -1.62
BRCA1-215ENST00000478531 CEMP1Q6PRD7 247 aaPredicted RBP4.93□□□□□ -1.62
BRCA1-215ENST00000478531 CCDC28AQ8IWP9 274 aa4.93□□□□□ -1.62
BRCA1-215ENST00000478531 CYB561D1Q8N8Q1 229 aa4.93□□□□□ -1.62
BRCA1-215ENST00000478531 TMEM263Q8WUH6 116 aaKnown RBP4.93□□□□□ -1.62
BRCA1-215ENST00000478531 ATG101Q9BSB4 218 aa4.93□□□□□ -1.62
BRCA1-215ENST00000478531 NAGKQ9UJ70 344 aa4.93□□□□□ -1.62
BRCA1-215ENST00000478531 EPDR1Q9UM22 224 aa4.93□□□□□ -1.62
BRCA1-215ENST00000478531 TEX48A0A1B0GUV7 120 aa4.93□□□□□ -1.62
BRCA1-215ENST00000478531 PEX7O00628 323 aa4.93□□□□□ -1.62
BRCA1-215ENST00000478531 PAGE4O60829 102 aa4.93□□□□□ -1.62
BRCA1-215ENST00000478531 ZNF324O75467 553 aaPredicted RBP4.93□□□□□ -1.62
BRCA1-215ENST00000478531 DEFB130BP0DP73 79 aa4.93□□□□□ -1.62
BRCA1-215ENST00000478531 DEFB130AP0DP74 79 aa4.93□□□□□ -1.62
BRCA1-215ENST00000478531 HTN3P15516 51 aa4.93□□□□□ -1.62
BRCA1-215ENST00000478531 S100A1P23297 94 aa4.93□□□□□ -1.62
BRCA1-215ENST00000478531 ATP5G3P48201 142 aa4.93□□□□□ -1.62
BRCA1-215ENST00000478531 DAD1P61803 113 aa4.93□□□□□ -1.62
BRCA1-215ENST00000478531 MUC21Q5SSG8 566 aa4.93□□□□□ -1.62
BRCA1-215ENST00000478531 PRNTQ86SH4 94 aa4.93□□□□□ -1.62
BRCA1-215ENST00000478531 RNASE8Q8TDE3 154 aaKnown RBP4.93□□□□□ -1.62
BRCA1-215ENST00000478531 MBD3L1Q8WWY6 194 aa4.93□□□□□ -1.62
BRCA1-215ENST00000478531 LINC00479Q96M42 142 aa4.93□□□□□ -1.62
BRCA1-215ENST00000478531 PYGO2Q9BRQ0 406 aa4.93□□□□□ -1.62
BRCA1-215ENST00000478531 NDFIP1Q9BT67 221 aa4.93□□□□□ -1.62
BRCA1-215ENST00000478531 TREM1Q9NP99 234 aa4.93□□□□□ -1.62
BRCA1-215ENST00000478531 NOP10Q9NPE3 64 aaKnown RBP4.93□□□□□ -1.62
BRCA1-215ENST00000478531 KLK5Q9Y337 293 aaPredicted RBP4.93□□□□□ -1.62
BRCA1-215ENST00000478531 KMT2AQ03164 3969 aa4.92□□□□□ -1.62
BRCA1-215ENST00000478531 RYR2Q92736 4967 aa4.92□□□□□ -1.62
BRCA1-215ENST00000478531 DEFB131BA0A096LNP1 70 aa4.92□□□□□ -1.62
BRCA1-215ENST00000478531 TRBV7-9A0A0J9YWB2 115 aa4.92□□□□□ -1.62
BRCA1-215ENST00000478531 PLAC8L1A1L4L8 177 aa4.92□□□□□ -1.62
BRCA1-215ENST00000478531 SNURFLB1AK76 121 aa4.92□□□□□ -1.62
BRCA1-215ENST00000478531 NMBP08949 121 aa4.92□□□□□ -1.62
BRCA1-215ENST00000478531 SULT1A2P50226 295 aa4.92□□□□□ -1.62
BRCA1-215ENST00000478531 RAB5CP51148 216 aa4.92□□□□□ -1.62
BRCA1-215ENST00000478531 FLI1Q01543 452 aaPredicted RBP4.92□□□□□ -1.62
BRCA1-215ENST00000478531 ALKAL2Q6UX46 152 aa4.92□□□□□ -1.62
BRCA1-215ENST00000478531 ZNF493Q6ZR52 646 aa4.92□□□□□ -1.62
BRCA1-215ENST00000478531 TMEM75Q8N9X5 138 aa4.92□□□□□ -1.62
BRCA1-215ENST00000478531 TVP23CQ96ET8 276 aa4.92□□□□□ -1.62
BRCA1-215ENST00000478531 C8orf49Q96NF6 230 aa4.92□□□□□ -1.62
BRCA1-215ENST00000478531 NKX6-2Q9C056 277 aaPredicted RBP4.92□□□□□ -1.62
BRCA1-215ENST00000478531 GNG13Q9P2W3 67 aa4.92□□□□□ -1.62
BRCA1-215ENST00000478531 TP53TG3Q9ULZ0 132 aa4.92□□□□□ -1.62
BRCA1-215ENST00000478531 PSG8Q9UQ74 426 aa4.92□□□□□ -1.62
BRCA1-215ENST00000478531 TIMM8BQ9Y5J9 83 aaPredicted RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms