RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 IGHV1OR15-1A0A075B7D0 117 aa11□□□□□ -0.65
HMGA1-206ENST00000478214 GGTLC3B5MD39 225 aa11□□□□□ -0.65
HMGA1-206ENST00000478214 RGS13O14921 159 aa11□□□□□ -0.65
HMGA1-206ENST00000478214 BCL2L11O43521 198 aa11□□□□□ -0.65
HMGA1-206ENST00000478214 FGF8P55075 233 aaPredicted RBP11□□□□□ -0.65
HMGA1-206ENST00000478214 SUMO1P63165 101 aaKnown RBP11□□□□□ -0.65
HMGA1-206ENST00000478214 ANXA2RQ3ZCQ2 193 aa11□□□□□ -0.65
HMGA1-206ENST00000478214 TMEM88Q6PEY1 159 aa11□□□□□ -0.65
HMGA1-206ENST00000478214 C5orf17Q8NAS9 161 aa11□□□□□ -0.65
HMGA1-206ENST00000478214 C11orf72Q8NBR9 251 aa11□□□□□ -0.65
HMGA1-206ENST00000478214 SGK494Q96LW2 274 aa11□□□□□ -0.65
HMGA1-206ENST00000478214 ZNF471Q9BX82 626 aaPredicted RBP11□□□□□ -0.65
HMGA1-206ENST00000478214 TP53TG3Q9ULZ0 132 aa11□□□□□ -0.65
HMGA1-206ENST00000478214 GAGE12BA1L429 117 aa10.99□□□□□ -0.65
HMGA1-206ENST00000478214 F5H768 121 aa10.99□□□□□ -0.65
HMGA1-206ENST00000478214 GAGE7O76087 117 aa10.99□□□□□ -0.65
HMGA1-206ENST00000478214 TCRAP04437 139 aa10.99□□□□□ -0.65
HMGA1-206ENST00000478214 ATP5G1P05496 136 aa10.99□□□□□ -0.65
HMGA1-206ENST00000478214 GAGE12FP0CL80 117 aa10.99□□□□□ -0.65
HMGA1-206ENST00000478214 GAGE12GP0CL81 117 aa10.99□□□□□ -0.65
HMGA1-206ENST00000478214 GAGE12IP0CL82 117 aa10.99□□□□□ -0.65
HMGA1-206ENST00000478214 ATP5G3P48201 142 aa10.99□□□□□ -0.65
HMGA1-206ENST00000478214 DAZ2Q13117 558 aaKnown RBP10.99□□□□□ -0.65
HMGA1-206ENST00000478214 LINC00612Q8N6U2 182 aa10.99□□□□□ -0.65
HMGA1-206ENST00000478214 ZNF680Q8NEM1 530 aa10.99□□□□□ -0.65
HMGA1-206ENST00000478214 TVP23CQ96ET8 276 aa10.99□□□□□ -0.65
HMGA1-206ENST00000478214 KANTRA0A1W2PQU2 76 aa10.98□□□□□ -0.65
HMGA1-206ENST00000478214 FHITP49789 147 aa10.98□□□□□ -0.65
HMGA1-206ENST00000478214 MUC21Q5SSG8 566 aa10.98□□□□□ -0.65
HMGA1-206ENST00000478214 TMUB2Q71RG4 321 aa10.98□□□□□ -0.65
HMGA1-206ENST00000478214 EPDR1Q9UM22 224 aa10.98□□□□□ -0.65
HMGA1-206ENST00000478214 KLF12Q9Y4X4 402 aa10.98□□□□□ -0.65
HMGA1-206ENST00000478214 SERTM2A0A1B0GWG4 89 aa10.97□□□□□ -0.65
HMGA1-206ENST00000478214 A0A1W2PRE2 83 aa10.97□□□□□ -0.65
HMGA1-206ENST00000478214 MAP1LC3B2A6NCE7 125 aa10.97□□□□□ -0.65
HMGA1-206ENST00000478214 F6UZH7 168 aa10.97□□□□□ -0.65
HMGA1-206ENST00000478214 SEC11BP0C7V7 166 aa10.97□□□□□ -0.65
HMGA1-206ENST00000478214 UBE2G2P60604 165 aa10.97□□□□□ -0.65
HMGA1-206ENST00000478214 Q6AWC8 147 aa10.97□□□□□ -0.65
HMGA1-206ENST00000478214 Q6ZTI0 123 aa10.97□□□□□ -0.65
HMGA1-206ENST00000478214 TCTE3Q8IZS6 198 aa10.97□□□□□ -0.65
HMGA1-206ENST00000478214 MAP1LC3BQ9GZQ8 125 aa10.97□□□□□ -0.65
HMGA1-206ENST00000478214 TREM1Q9NP99 234 aa10.97□□□□□ -0.65
HMGA1-206ENST00000478214 PFDN1O60925 122 aa10.96□□□□□ -0.65
HMGA1-206ENST00000478214 TCL1AP56279 114 aa10.96□□□□□ -0.65
HMGA1-206ENST00000478214 IBA57Q5T440 356 aaKnown RBP10.96□□□□□ -0.65
HMGA1-206ENST00000478214 hCG_2014768A0A024R1R8 64 aa10.95□□□□□ -0.66
HMGA1-206ENST00000478214 TRGV1A0A0A0MS02 117 aa10.95□□□□□ -0.66
HMGA1-206ENST00000478214 FAM74A7A6NL05 159 aa10.95□□□□□ -0.66
HMGA1-206ENST00000478214 K7EQM0 130 aa10.95□□□□□ -0.66
HMGA1-206ENST00000478214 IGLV2-11P01706 119 aa10.95□□□□□ -0.66
HMGA1-206ENST00000478214 P0DMU3 169 aa10.95□□□□□ -0.66
HMGA1-206ENST00000478214 FAM231AP0DMU4 169 aa10.95□□□□□ -0.66
HMGA1-206ENST00000478214 FAM231CP0DMU5 169 aa10.95□□□□□ -0.66
HMGA1-206ENST00000478214 CYB561D1Q8N8Q1 229 aa10.95□□□□□ -0.66
HMGA1-206ENST00000478214 FAM213BQ8TBF2 198 aa10.95□□□□□ -0.66
HMGA1-206ENST00000478214 PSG8Q9UQ74 426 aa10.95□□□□□ -0.66
HMGA1-206ENST00000478214 DNAH10Q8IVF4 4471 aa10.95□□□□□ -0.66
HMGA1-206ENST00000478214 UMAD1C9J7I0 102 aa10.94□□□□□ -0.66
HMGA1-206ENST00000478214 SPINK4O60575 86 aa10.94□□□□□ -0.66
HMGA1-206ENST00000478214 IFNA7P01567 189 aa10.94□□□□□ -0.66
HMGA1-206ENST00000478214 EIF5AP63241 154 aaKnown RBP10.94□□□□□ -0.66
HMGA1-206ENST00000478214 FLI1Q01543 452 aaPredicted RBP10.94□□□□□ -0.66
HMGA1-206ENST00000478214 LGALSLQ3ZCW2 172 aaPredicted RBP10.94□□□□□ -0.66
HMGA1-206ENST00000478214 FAM159AQ6UWV7 190 aa10.94□□□□□ -0.66
HMGA1-206ENST00000478214 LINC00479Q96M42 142 aa10.94□□□□□ -0.66
HMGA1-206ENST00000478214 ATG101Q9BSB4 218 aa10.94□□□□□ -0.66
HMGA1-206ENST00000478214 NDFIP1Q9BT67 221 aa10.94□□□□□ -0.66
HMGA1-206ENST00000478214 MDFICQ9P1T7 246 aa10.94□□□□□ -0.66
HMGA1-206ENST00000478214 NAGKQ9UJ70 344 aa10.94□□□□□ -0.66
HMGA1-206ENST00000478214 TRGV2A0A075B6R0 118 aa10.93□□□□□ -0.66
HMGA1-206ENST00000478214 TRAV21A0A0B4J279 112 aa10.93□□□□□ -0.66
HMGA1-206ENST00000478214 TPT1P13693 172 aaKnown RBP10.93□□□□□ -0.66
HMGA1-206ENST00000478214 HOXA5P20719 270 aa10.93□□□□□ -0.66
HMGA1-206ENST00000478214 ZNF415Q09FC8 603 aa10.93□□□□□ -0.66
HMGA1-206ENST00000478214 OR5I1Q13606 314 aa10.93□□□□□ -0.66
HMGA1-206ENST00000478214 TMEM183BQ1AE95 376 aa10.93□□□□□ -0.66
HMGA1-206ENST00000478214 PRNTQ86SH4 94 aa10.93□□□□□ -0.66
HMGA1-206ENST00000478214 TMEM183AQ8IXX5 376 aa10.93□□□□□ -0.66
HMGA1-206ENST00000478214 POM121L12Q8N7R1 296 aa10.93□□□□□ -0.66
HMGA1-206ENST00000478214 TMEM75Q8N9X5 138 aa10.93□□□□□ -0.66
HMGA1-206ENST00000478214 C15orf53Q8NAA6 179 aa10.93□□□□□ -0.66
HMGA1-206ENST00000478214 STOML3Q8TAV4 291 aa10.93□□□□□ -0.66
HMGA1-206ENST00000478214 C8orf49Q96NF6 230 aa10.93□□□□□ -0.66
HMGA1-206ENST00000478214 EPPK1P58107 5090 aaKnown RBP10.92□□□□□ -0.66
HMGA1-206ENST00000478214 TRAV34A0A0B4J273 112 aa10.92□□□□□ -0.66
HMGA1-206ENST00000478214 A0A1B0GV50 99 aa10.92□□□□□ -0.66
HMGA1-206ENST00000478214 PEX7O00628 323 aa10.92□□□□□ -0.66
HMGA1-206ENST00000478214 ZNF80P51504 273 aaPredicted RBP10.92□□□□□ -0.66
HMGA1-206ENST00000478214 SFT2D1Q8WV19 159 aa10.92□□□□□ -0.66
HMGA1-206ENST00000478214 MBD3L1Q8WWY6 194 aa10.92□□□□□ -0.66
HMGA1-206ENST00000478214 NKX6-2Q9C056 277 aaPredicted RBP10.92□□□□□ -0.66
HMGA1-206ENST00000478214 MRPL16Q9NX20 251 aaKnown RBP10.92□□□□□ -0.66
HMGA1-206ENST00000478214 TRGV11A0A075B6L2 103 aa10.91□□□□□ -0.66
HMGA1-206ENST00000478214 GNRH2O43555 120 aa10.91□□□□□ -0.66
HMGA1-206ENST00000478214 NUDT3O95989 172 aa10.91□□□□□ -0.66
HMGA1-206ENST00000478214 C1QBP02746 253 aa10.91□□□□□ -0.66
HMGA1-206ENST00000478214 TDRG1Q3Y452 100 aa10.91□□□□□ -0.66
HMGA1-206ENST00000478214 UBE2DNLQ8IWF7 75 aa10.91□□□□□ -0.66
HMGA1-206ENST00000478214 C18orf15Q96N68 181 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms