RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 ZNF586Q9NXT0 402 aa9.98□□□□□ -0.81
CXCR4-203ENST00000466288 PXMP4Q9Y6I8 212 aa9.98□□□□□ -0.81
CXCR4-203ENST00000466288 DNAH8Q96JB1 4490 aa9.98□□□□□ -0.81
CXCR4-203ENST00000466288 M0R2Z0 102 aa9.98□□□□□ -0.81
CXCR4-203ENST00000466288 B2MP61769 119 aa9.98□□□□□ -0.81
CXCR4-203ENST00000466288 PNRC1Q12796 327 aaPredicted RBP9.98□□□□□ -0.81
CXCR4-203ENST00000466288 SPINK13Q1W4C9 94 aa9.98□□□□□ -0.81
CXCR4-203ENST00000466288 RAB24Q969Q5 203 aa9.98□□□□□ -0.81
CXCR4-203ENST00000466288 SMCO4Q9NRQ5 59 aa9.98□□□□□ -0.81
CXCR4-203ENST00000466288 MDFICQ9P1T7 246 aa9.98□□□□□ -0.81
CXCR4-203ENST00000466288 GNG13Q9P2W3 67 aa9.98□□□□□ -0.81
CXCR4-203ENST00000466288 ARL2-SNX15V9GYD0 113 aa9.98□□□□□ -0.81
CXCR4-203ENST00000466288 B4DEV8 164 aa9.97□□□□□ -0.81
CXCR4-203ENST00000466288 INSP01308 110 aa9.97□□□□□ -0.81
CXCR4-203ENST00000466288 LINC00315P59091 139 aa9.97□□□□□ -0.81
CXCR4-203ENST00000466288 SELENOTP62341 195 aa9.97□□□□□ -0.81
CXCR4-203ENST00000466288 RHOBP62745 196 aa9.97□□□□□ -0.81
CXCR4-203ENST00000466288 ESRGQ1W209 222 aa9.97□□□□□ -0.81
CXCR4-203ENST00000466288 ATRAIDQ6UW56 229 aa9.97□□□□□ -0.81
CXCR4-203ENST00000466288 SLC45A2Q9UMX9 530 aa9.97□□□□□ -0.81
CXCR4-203ENST00000466288 PRELID1Q9Y255 219 aa9.97□□□□□ -0.81
CXCR4-203ENST00000466288 CXorf1O96002 111 aa9.96□□□□□ -0.82
CXCR4-203ENST00000466288 ZNF90Q03938 601 aa9.96□□□□□ -0.82
CXCR4-203ENST00000466288 CDPF1Q6NVV7 123 aa9.96□□□□□ -0.82
CXCR4-203ENST00000466288 FAM122CQ6P4D5 195 aa9.96□□□□□ -0.82
CXCR4-203ENST00000466288 ZNF503Q96F45 646 aa9.96□□□□□ -0.82
CXCR4-203ENST00000466288 C17orf77Q96MU5 243 aa9.96□□□□□ -0.82
CXCR4-203ENST00000466288 IGKV1D-37A0A075B6S9 117 aa9.95□□□□□ -0.82
CXCR4-203ENST00000466288 TRAV26-1A0A087WT03 109 aa9.95□□□□□ -0.82
CXCR4-203ENST00000466288 A0A087WWC5 75 aa9.95□□□□□ -0.82
CXCR4-203ENST00000466288 SMR3BP02814 79 aaPredicted RBP9.95□□□□□ -0.82
CXCR4-203ENST00000466288 STAG3L2P0CL84 134 aa9.95□□□□□ -0.82
CXCR4-203ENST00000466288 STAG3L3P0CL85 134 aa9.95□□□□□ -0.82
CXCR4-203ENST00000466288 CNN1P51911 297 aaKnown RBP9.95□□□□□ -0.82
CXCR4-203ENST00000466288 KRTAP10-1P60331 282 aa9.95□□□□□ -0.82
CXCR4-203ENST00000466288 MEF2BQ02080 365 aaPredicted RBP9.95□□□□□ -0.82
CXCR4-203ENST00000466288 GAMTQ14353 236 aa9.95□□□□□ -0.82
CXCR4-203ENST00000466288 SAMD13Q5VXD3 122 aa9.95□□□□□ -0.82
CXCR4-203ENST00000466288 RXFP4Q8TDU9 374 aa9.95□□□□□ -0.82
CXCR4-203ENST00000466288 C16orf92Q96LL3 132 aa9.95□□□□□ -0.82
CXCR4-203ENST00000466288 MRPS16Q9Y3D3 137 aaKnown RBP9.95□□□□□ -0.82
CXCR4-203ENST00000466288 ZFP92A6NM28 416 aa9.94□□□□□ -0.82
CXCR4-203ENST00000466288 PDE6DO43924 150 aa9.94□□□□□ -0.82
CXCR4-203ENST00000466288 OR8I2Q8N0Y5 310 aa9.94□□□□□ -0.82
CXCR4-203ENST00000466288 THAP8Q8NA92 274 aa9.94□□□□□ -0.82
CXCR4-203ENST00000466288 TVP23CQ96ET8 276 aa9.94□□□□□ -0.82
CXCR4-203ENST00000466288 MRPL32Q9BYC8 188 aaKnown RBP9.94□□□□□ -0.82
CXCR4-203ENST00000466288 SLC25A22Q9H936 323 aa9.94□□□□□ -0.82
CXCR4-203ENST00000466288 TRAV12-2A0A075B6T6 113 aa9.93□□□□□ -0.82
CXCR4-203ENST00000466288 A0A1B0GV50 99 aa9.93□□□□□ -0.82
CXCR4-203ENST00000466288 J3QL48 77 aa9.93□□□□□ -0.82
CXCR4-203ENST00000466288 MEOX2P50222 304 aa9.93□□□□□ -0.82
CXCR4-203ENST00000466288 TAS2R45P59539 299 aa9.93□□□□□ -0.82
CXCR4-203ENST00000466288 LYZP61626 148 aa9.93□□□□□ -0.82
CXCR4-203ENST00000466288 OR5I1Q13606 314 aa9.93□□□□□ -0.82
CXCR4-203ENST00000466288 MIC13Q5XKP0 118 aa9.93□□□□□ -0.82
CXCR4-203ENST00000466288 PFDN5Q99471 154 aa9.93□□□□□ -0.82
CXCR4-203ENST00000466288 TIMM8BQ9Y5J9 83 aaPredicted RBP9.93□□□□□ -0.82
CXCR4-203ENST00000466288 C7orf77A4D0Y5 90 aa9.92□□□□□ -0.82
CXCR4-203ENST00000466288 F6UZH7 168 aa9.92□□□□□ -0.82
CXCR4-203ENST00000466288 H3BQ15 152 aa9.92□□□□□ -0.82
CXCR4-203ENST00000466288 LCE2BO14633 110 aa9.92□□□□□ -0.82
CXCR4-203ENST00000466288 DUSP14O95147 198 aaKnown RBP9.92□□□□□ -0.82
CXCR4-203ENST00000466288 LINC00869P0C866 280 aa9.92□□□□□ -0.82
CXCR4-203ENST00000466288 PQLC2Q6ZP29 291 aa9.92□□□□□ -0.82
CXCR4-203ENST00000466288 C15orf54Q8N8G6 183 aa9.92□□□□□ -0.82
CXCR4-203ENST00000466288 CYB561D1Q8N8Q1 229 aa9.92□□□□□ -0.82
CXCR4-203ENST00000466288 OR1L4Q8NGR5 311 aa9.92□□□□□ -0.82
CXCR4-203ENST00000466288 TMEM167BQ9NRX6 74 aa9.92□□□□□ -0.82
CXCR4-203ENST00000466288 TMEM242Q9NWH2 141 aa9.92□□□□□ -0.82
CXCR4-203ENST00000466288 A0A0J9YY99 117 aa9.91□□□□□ -0.82
CXCR4-203ENST00000466288 M0R036 132 aa9.91□□□□□ -0.82
CXCR4-203ENST00000466288 FGF8P55075 233 aaPredicted RBP9.91□□□□□ -0.82
CXCR4-203ENST00000466288 TAS2R60P59551 318 aa9.91□□□□□ -0.82
CXCR4-203ENST00000466288 ERVFC1-1P60608 527 aa9.91□□□□□ -0.82
CXCR4-203ENST00000466288 CYP2G1PQ6ZSU1 146 aa9.91□□□□□ -0.82
CXCR4-203ENST00000466288 C16orf74Q96GX8 76 aa9.91□□□□□ -0.82
CXCR4-203ENST00000466288 LINC01587Q99440 93 aa9.91□□□□□ -0.82
CXCR4-203ENST00000466288 TRGV9Q99603 122 aa9.91□□□□□ -0.82
CXCR4-203ENST00000466288 NOP10Q9NPE3 64 aaKnown RBP9.91□□□□□ -0.82
CXCR4-203ENST00000466288 RPS10P5Q9NQ39 176 aa9.91□□□□□ -0.82
CXCR4-203ENST00000466288 FAM74A7A6NL05 159 aa9.91□□□□□ -0.82
CXCR4-203ENST00000466288 FAM229AH3BQW9 127 aa9.91□□□□□ -0.82
CXCR4-203ENST00000466288 EREGO14944 169 aa9.91□□□□□ -0.82
CXCR4-203ENST00000466288 FABP1P07148 127 aa9.91□□□□□ -0.82
CXCR4-203ENST00000466288 OR5G3P0C626 314 aa9.91□□□□□ -0.82
CXCR4-203ENST00000466288 HOXA5P20719 270 aa9.91□□□□□ -0.82
CXCR4-203ENST00000466288 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.91□□□□□ -0.82
CXCR4-203ENST00000466288 LINC00612Q8N6U2 182 aa9.91□□□□□ -0.82
CXCR4-203ENST00000466288 RNASE8Q8TDE3 154 aaKnown RBP9.91□□□□□ -0.82
CXCR4-203ENST00000466288 SLC25A39Q9BZJ4 359 aaPredicted RBP9.91□□□□□ -0.82
CXCR4-203ENST00000466288 FUT9Q9Y231 359 aa9.91□□□□□ -0.82
CXCR4-203ENST00000466288 LRP1Q07954 4544 aaKnown RBP9.9□□□□□ -0.82
CXCR4-203ENST00000466288 TRAV8-2A0A0B4J237 113 aa9.9□□□□□ -0.83
CXCR4-203ENST00000466288 H3BNG1 76 aa9.9□□□□□ -0.83
CXCR4-203ENST00000466288 HTN1P15515 57 aa9.9□□□□□ -0.83
CXCR4-203ENST00000466288 GALR1P47211 349 aa9.9□□□□□ -0.83
CXCR4-203ENST00000466288 IGFL4Q6B9Z1 124 aa9.9□□□□□ -0.83
CXCR4-203ENST00000466288 Q6ZSN1 163 aa9.9□□□□□ -0.83
CXCR4-203ENST00000466288 TMEM256Q8N2U0 113 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms