RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 S100A9P06702 114 aaKnown RBP9.82□□□□□ -0.84
LIMD1-203ENST00000465039 UBE2G2P60604 165 aa9.82□□□□□ -0.84
LIMD1-203ENST00000465039 GNG5P63218 68 aa9.82□□□□□ -0.84
LIMD1-203ENST00000465039 FLI1Q01543 452 aaPredicted RBP9.82□□□□□ -0.84
LIMD1-203ENST00000465039 KIR3DS1Q14943 382 aa9.82□□□□□ -0.84
LIMD1-203ENST00000465039 TDRG1Q3Y452 100 aa9.82□□□□□ -0.84
LIMD1-203ENST00000465039 IBA57Q5T440 356 aaKnown RBP9.82□□□□□ -0.84
LIMD1-203ENST00000465039 TREM1Q9NP99 234 aa9.82□□□□□ -0.84
LIMD1-203ENST00000465039 RPH3ALQ9UNE2 315 aa9.82□□□□□ -0.84
LIMD1-203ENST00000465039 KLK5Q9Y337 293 aaPredicted RBP9.82□□□□□ -0.84
LIMD1-203ENST00000465039 KLF12Q9Y4X4 402 aa9.82□□□□□ -0.84
LIMD1-203ENST00000465039 PLAC8L1A1L4L8 177 aa9.81□□□□□ -0.84
LIMD1-203ENST00000465039 ZNF705GA8MUZ8 300 aaPredicted RBP9.81□□□□□ -0.84
LIMD1-203ENST00000465039 IFNA1P01562 189 aa9.81□□□□□ -0.84
LIMD1-203ENST00000465039 RNASE4P34096 147 aaKnown RBP9.81□□□□□ -0.84
LIMD1-203ENST00000465039 BTN1A1Q13410 526 aa9.81□□□□□ -0.84
LIMD1-203ENST00000465039 CEMP1Q6PRD7 247 aaPredicted RBP9.81□□□□□ -0.84
LIMD1-203ENST00000465039 COX8CQ7Z4L0 72 aa9.81□□□□□ -0.84
LIMD1-203ENST00000465039 EIF4E3Q8N5X7 224 aaKnown RBP9.81□□□□□ -0.84
LIMD1-203ENST00000465039 FMC1Q96HJ9 113 aa9.81□□□□□ -0.84
LIMD1-203ENST00000465039 TP53TG3Q9ULZ0 132 aa9.81□□□□□ -0.84
LIMD1-203ENST00000465039 PSG8Q9UQ74 426 aa9.81□□□□□ -0.84
LIMD1-203ENST00000465039 ZFP30Q9Y2G7 519 aa9.81□□□□□ -0.84
LIMD1-203ENST00000465039 TIMM8BQ9Y5J9 83 aaPredicted RBP9.81□□□□□ -0.84
LIMD1-203ENST00000465039 TENM2Q9NT68 2774 aa9.81□□□□□ -0.84
LIMD1-203ENST00000465039 CSMD3Q7Z407 3707 aa9.8□□□□□ -0.84
LIMD1-203ENST00000465039 TRAV8-1A0A0A6YYK1 113 aa9.8□□□□□ -0.84
LIMD1-203ENST00000465039 TRAV10A0A0B4J240 114 aa9.8□□□□□ -0.84
LIMD1-203ENST00000465039 TRAV21A0A0B4J279 112 aa9.8□□□□□ -0.84
LIMD1-203ENST00000465039 PAGE4O60829 102 aa9.8□□□□□ -0.84
LIMD1-203ENST00000465039 PRB4P10163 310 aaPredicted RBP9.8□□□□□ -0.84
LIMD1-203ENST00000465039 BLOC1S1P78537 153 aa9.8□□□□□ -0.84
LIMD1-203ENST00000465039 DAZ2Q13117 558 aaKnown RBP9.8□□□□□ -0.84
LIMD1-203ENST00000465039 PRR9Q5T870 116 aa9.8□□□□□ -0.84
LIMD1-203ENST00000465039 FAM222AQ5U5X8 452 aa9.8□□□□□ -0.84
LIMD1-203ENST00000465039 CST9LP1Q5W188 147 aa9.8□□□□□ -0.84
LIMD1-203ENST00000465039 PHLDA1Q8WV24 401 aaPredicted RBP9.8□□□□□ -0.84
LIMD1-203ENST00000465039 IGHV1OR15-1A0A075B7D0 117 aa9.79□□□□□ -0.84
LIMD1-203ENST00000465039 RGS13O14921 159 aa9.79□□□□□ -0.84
LIMD1-203ENST00000465039 NANOS2P60321 138 aaKnown RBP9.79□□□□□ -0.84
LIMD1-203ENST00000465039 Q86TA4 180 aa9.79□□□□□ -0.84
LIMD1-203ENST00000465039 C11orf52Q96A22 123 aa9.79□□□□□ -0.84
LIMD1-203ENST00000465039 KCNS1Q96KK3 526 aa9.79□□□□□ -0.84
LIMD1-203ENST00000465039 FAM210BQ96KR6 192 aa9.79□□□□□ -0.84
LIMD1-203ENST00000465039 CELA1Q9UNI1 258 aa9.79□□□□□ -0.84
LIMD1-203ENST00000465039 SNURFLB1AK76 121 aa9.78□□□□□ -0.84
LIMD1-203ENST00000465039 J3KRW8 73 aa9.78□□□□□ -0.84
LIMD1-203ENST00000465039 PFN1P07737 140 aaKnown RBP9.78□□□□□ -0.84
LIMD1-203ENST00000465039 AZU1P20160 251 aa9.78□□□□□ -0.84
LIMD1-203ENST00000465039 NKX2-5P52952 324 aaPredicted RBP9.78□□□□□ -0.84
LIMD1-203ENST00000465039 EMP1P54849 157 aa9.78□□□□□ -0.84
LIMD1-203ENST00000465039 UBE2G1P62253 170 aa9.78□□□□□ -0.84
LIMD1-203ENST00000465039 TMEM183BQ1AE95 376 aa9.78□□□□□ -0.84
LIMD1-203ENST00000465039 C12orf74Q32Q52 190 aa9.78□□□□□ -0.84
LIMD1-203ENST00000465039 SMUG1Q53HV7 270 aa9.78□□□□□ -0.84
LIMD1-203ENST00000465039 LINC00612Q8N6U2 182 aa9.78□□□□□ -0.84
LIMD1-203ENST00000465039 LYPD6BQ8NI32 183 aa9.78□□□□□ -0.84
LIMD1-203ENST00000465039 C2CD4CQ8TF44 421 aa9.78□□□□□ -0.84
LIMD1-203ENST00000465039 TVP23CQ96ET8 276 aa9.78□□□□□ -0.84
LIMD1-203ENST00000465039 C18orf15Q96N68 181 aa9.78□□□□□ -0.84
LIMD1-203ENST00000465039 STARD9Q9P2P6 4700 aa9.78□□□□□ -0.84
LIMD1-203ENST00000465039 TRGV11A0A075B6L2 103 aa9.77□□□□□ -0.85
LIMD1-203ENST00000465039 CBY3A6NI87 242 aa9.77□□□□□ -0.85
LIMD1-203ENST00000465039 PDE6DO43924 150 aa9.77□□□□□ -0.85
LIMD1-203ENST00000465039 LTAP01374 205 aa9.77□□□□□ -0.85
LIMD1-203ENST00000465039 ATP5G3P48201 142 aa9.77□□□□□ -0.85
LIMD1-203ENST00000465039 TCL1AP56279 114 aa9.77□□□□□ -0.85
LIMD1-203ENST00000465039 MEF2BQ02080 365 aaPredicted RBP9.77□□□□□ -0.85
LIMD1-203ENST00000465039 ZFAND6Q6FIF0 208 aa9.77□□□□□ -0.85
LIMD1-203ENST00000465039 FAM159AQ6UWV7 190 aa9.77□□□□□ -0.85
LIMD1-203ENST00000465039 ALKAL2Q6UX46 152 aa9.77□□□□□ -0.85
LIMD1-203ENST00000465039 Q6ZTC4 211 aa9.77□□□□□ -0.85
LIMD1-203ENST00000465039 C11orf72Q8NBR9 251 aa9.77□□□□□ -0.85
LIMD1-203ENST00000465039 GNG13Q9P2W3 67 aa9.77□□□□□ -0.85
LIMD1-203ENST00000465039 NDUFS6O75380 124 aaKnown RBP9.76□□□□□ -0.85
LIMD1-203ENST00000465039 BCL2P10415 239 aa9.76□□□□□ -0.85
LIMD1-203ENST00000465039 HTN1P15515 57 aa9.76□□□□□ -0.85
LIMD1-203ENST00000465039 AKR1C3P42330 323 aa9.76□□□□□ -0.85
LIMD1-203ENST00000465039 DAD1P61803 113 aa9.76□□□□□ -0.85
LIMD1-203ENST00000465039 ZNF415Q09FC8 603 aa9.76□□□□□ -0.85
LIMD1-203ENST00000465039 LGALS9BQ3B8N2 356 aa9.76□□□□□ -0.85
LIMD1-203ENST00000465039 PRNTQ86SH4 94 aa9.76□□□□□ -0.85
LIMD1-203ENST00000465039 SMIM12Q96EX1 92 aa9.76□□□□□ -0.85
LIMD1-203ENST00000465039 A0A1B0GV50 99 aa9.75□□□□□ -0.85
LIMD1-203ENST00000465039 GCGP01275 180 aa9.75□□□□□ -0.85
LIMD1-203ENST00000465039 CCL20P78556 96 aa9.75□□□□□ -0.85
LIMD1-203ENST00000465039 NDUFAF3Q9BU61 184 aa9.75□□□□□ -0.85
LIMD1-203ENST00000465039 SDF2L1Q9HCN8 221 aa9.75□□□□□ -0.85
LIMD1-203ENST00000465039 VAX2Q9UIW0 290 aa9.75□□□□□ -0.85
LIMD1-203ENST00000465039 DEFB131BA0A096LNP1 70 aa9.74□□□□□ -0.85
LIMD1-203ENST00000465039 TMEM183AQ8IXX5 376 aa9.74□□□□□ -0.85
LIMD1-203ENST00000465039 LINC00479Q96M42 142 aa9.74□□□□□ -0.85
LIMD1-203ENST00000465039 SPXQ9BT56 116 aa9.74□□□□□ -0.85
LIMD1-203ENST00000465039 NOP10Q9NPE3 64 aaKnown RBP9.74□□□□□ -0.85
LIMD1-203ENST00000465039 BOLA1Q9Y3E2 137 aa9.74□□□□□ -0.85
LIMD1-203ENST00000465039 TRAV34A0A0B4J273 112 aa9.73□□□□□ -0.85
LIMD1-203ENST00000465039 SCO2A0A1W2PP80 73 aa9.73□□□□□ -0.85
LIMD1-203ENST00000465039 FABP5P3A8MUU1 101 aa9.73□□□□□ -0.85
LIMD1-203ENST00000465039 PRM2P04554 102 aa9.73□□□□□ -0.85
LIMD1-203ENST00000465039 ATP5G1P05496 136 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms