RNA–Protein interactions for RNA: ENST00000463315.1

SEMA3D-203, Transcript of semaphorin 3D, humanhuman

TSL 2

Gene SEMA3D, Length 1,257 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-203ENST00000463315 GOLT1AQ6ZVE7 132 aa9.8□□□□□ -0.84
SEMA3D-203ENST00000463315 EPDR1Q9UM22 224 aa9.8□□□□□ -0.84
SEMA3D-203ENST00000463315 CELA1Q9UNI1 258 aa9.8□□□□□ -0.84
SEMA3D-203ENST00000463315 TIMM8BQ9Y5J9 83 aaPredicted RBP9.8□□□□□ -0.84
SEMA3D-203ENST00000463315 STARD9Q9P2P6 4700 aa9.79□□□□□ -0.84
SEMA3D-203ENST00000463315 PLAC8L1A1L4L8 177 aa9.79□□□□□ -0.84
SEMA3D-203ENST00000463315 RNASE4P34096 147 aaKnown RBP9.79□□□□□ -0.84
SEMA3D-203ENST00000463315 PPT1P50897 306 aa9.79□□□□□ -0.84
SEMA3D-203ENST00000463315 EMP1P54849 157 aa9.79□□□□□ -0.84
SEMA3D-203ENST00000463315 CD300CQ08708 224 aa9.79□□□□□ -0.84
SEMA3D-203ENST00000463315 Q6AWC8 147 aa9.79□□□□□ -0.84
SEMA3D-203ENST00000463315 Q6ZTC4 211 aa9.79□□□□□ -0.84
SEMA3D-203ENST00000463315 IQCF2Q8IXL9 164 aa9.79□□□□□ -0.84
SEMA3D-203ENST00000463315 CYB561D1Q8N8Q1 229 aa9.79□□□□□ -0.84
SEMA3D-203ENST00000463315 ZNF680Q8NEM1 530 aa9.79□□□□□ -0.84
SEMA3D-203ENST00000463315 FAM213BQ8TBF2 198 aa9.79□□□□□ -0.84
SEMA3D-203ENST00000463315 C2CD4CQ8TF44 421 aa9.79□□□□□ -0.84
SEMA3D-203ENST00000463315 HIST1H2BAQ96A08 127 aa9.79□□□□□ -0.84
SEMA3D-203ENST00000463315 FAM210BQ96KR6 192 aa9.79□□□□□ -0.84
SEMA3D-203ENST00000463315 ATG101Q9BSB4 218 aa9.79□□□□□ -0.84
SEMA3D-203ENST00000463315 TRAV1-1A0A0B4J248 108 aa9.78□□□□□ -0.84
SEMA3D-203ENST00000463315 FAM74A7A6NL05 159 aa9.78□□□□□ -0.84
SEMA3D-203ENST00000463315 H2AFB1P0C5Y9 115 aa9.78□□□□□ -0.84
SEMA3D-203ENST00000463315 AZU1P20160 251 aa9.78□□□□□ -0.84
SEMA3D-203ENST00000463315 FGF8P55075 233 aaPredicted RBP9.78□□□□□ -0.84
SEMA3D-203ENST00000463315 BTN1A1Q13410 526 aa9.78□□□□□ -0.84
SEMA3D-203ENST00000463315 C9orf62Q8N4C0 152 aa9.78□□□□□ -0.84
SEMA3D-203ENST00000463315 EIF4E3Q8N5X7 224 aaKnown RBP9.78□□□□□ -0.84
SEMA3D-203ENST00000463315 TMEM75Q8N9X5 138 aa9.78□□□□□ -0.84
SEMA3D-203ENST00000463315 Q8TAT8 98 aa9.78□□□□□ -0.84
SEMA3D-203ENST00000463315 SFT2D1Q8WV19 159 aa9.78□□□□□ -0.84
SEMA3D-203ENST00000463315 NDFIP1Q9BT67 221 aa9.78□□□□□ -0.84
SEMA3D-203ENST00000463315 TMPRSS5Q9H3S3 457 aa9.78□□□□□ -0.84
SEMA3D-203ENST00000463315 KMT2CQ8NEZ4 4911 aaKnown RBP9.78□□□□□ -0.84
SEMA3D-203ENST00000463315 F6UZH7 168 aa9.77□□□□□ -0.85
SEMA3D-203ENST00000463315 TEX46H3BTG2 121 aa9.77□□□□□ -0.85
SEMA3D-203ENST00000463315 J3KRW8 73 aa9.77□□□□□ -0.85
SEMA3D-203ENST00000463315 HTN1P15515 57 aa9.77□□□□□ -0.85
SEMA3D-203ENST00000463315 SULT1A2P50226 295 aa9.77□□□□□ -0.85
SEMA3D-203ENST00000463315 GNG5P63218 68 aa9.77□□□□□ -0.85
SEMA3D-203ENST00000463315 DAZ2Q13117 558 aaKnown RBP9.77□□□□□ -0.85
SEMA3D-203ENST00000463315 SAPCD1Q5SSQ6 148 aa9.77□□□□□ -0.85
SEMA3D-203ENST00000463315 IBA57Q5T440 356 aaKnown RBP9.77□□□□□ -0.85
SEMA3D-203ENST00000463315 DEFB131BA0A096LNP1 70 aa9.76□□□□□ -0.85
SEMA3D-203ENST00000463315 LCE6AA0A183 80 aa9.76□□□□□ -0.85
SEMA3D-203ENST00000463315 A0A1B0GVG6 124 aa9.76□□□□□ -0.85
SEMA3D-203ENST00000463315 RGS13O14921 159 aa9.76□□□□□ -0.85
SEMA3D-203ENST00000463315 IFNA7P01567 189 aa9.76□□□□□ -0.85
SEMA3D-203ENST00000463315 IGLV2-11P01706 119 aa9.76□□□□□ -0.85
SEMA3D-203ENST00000463315 PRM2P04554 102 aa9.76□□□□□ -0.85
SEMA3D-203ENST00000463315 DAD1P61803 113 aa9.76□□□□□ -0.85
SEMA3D-203ENST00000463315 TDRG1Q3Y452 100 aa9.76□□□□□ -0.85
SEMA3D-203ENST00000463315 PRR9Q5T870 116 aa9.76□□□□□ -0.85
SEMA3D-203ENST00000463315 TREM1Q9NP99 234 aa9.76□□□□□ -0.85
SEMA3D-203ENST00000463315 TP53TG3Q9ULZ0 132 aa9.76□□□□□ -0.85
SEMA3D-203ENST00000463315 RPH3ALQ9UNE2 315 aa9.76□□□□□ -0.85
SEMA3D-203ENST00000463315 IGHV1OR15-1A0A075B7D0 117 aa9.75□□□□□ -0.85
SEMA3D-203ENST00000463315 TRAV8-1A0A0A6YYK1 113 aa9.75□□□□□ -0.85
SEMA3D-203ENST00000463315 TRAV21A0A0B4J279 112 aa9.75□□□□□ -0.85
SEMA3D-203ENST00000463315 CBY3A6NI87 242 aa9.75□□□□□ -0.85
SEMA3D-203ENST00000463315 SNURFLB1AK76 121 aa9.75□□□□□ -0.85
SEMA3D-203ENST00000463315 FLI1Q01543 452 aaPredicted RBP9.75□□□□□ -0.85
SEMA3D-203ENST00000463315 LINC00612Q8N6U2 182 aa9.75□□□□□ -0.85
SEMA3D-203ENST00000463315 PSG8Q9UQ74 426 aa9.75□□□□□ -0.85
SEMA3D-203ENST00000463315 LYSTQ99698 3801 aa9.75□□□□□ -0.85
SEMA3D-203ENST00000463315 PEX7O00628 323 aa9.74□□□□□ -0.85
SEMA3D-203ENST00000463315 UBE2G2P60604 165 aa9.74□□□□□ -0.85
SEMA3D-203ENST00000463315 C11orf72Q8NBR9 251 aa9.74□□□□□ -0.85
SEMA3D-203ENST00000463315 TVP23CQ96ET8 276 aa9.74□□□□□ -0.85
SEMA3D-203ENST00000463315 C18orf15Q96N68 181 aa9.74□□□□□ -0.85
SEMA3D-203ENST00000463315 TXNDC17Q9BRA2 123 aa9.74□□□□□ -0.85
SEMA3D-203ENST00000463315 KLF12Q9Y4X4 402 aa9.74□□□□□ -0.85
SEMA3D-203ENST00000463315 TRBV6-1A0A0K0K1D8 114 aa9.73□□□□□ -0.85
SEMA3D-203ENST00000463315 S100A9P06702 114 aaKnown RBP9.73□□□□□ -0.85
SEMA3D-203ENST00000463315 TCL1AP56279 114 aa9.73□□□□□ -0.85
SEMA3D-203ENST00000463315 LGALS9BQ3B8N2 356 aa9.73□□□□□ -0.85
SEMA3D-203ENST00000463315 CST9LP1Q5W188 147 aa9.73□□□□□ -0.85
SEMA3D-203ENST00000463315 FAM159AQ6UWV7 190 aa9.73□□□□□ -0.85
SEMA3D-203ENST00000463315 COX8CQ7Z4L0 72 aa9.73□□□□□ -0.85
SEMA3D-203ENST00000463315 FMC1Q96HJ9 113 aa9.73□□□□□ -0.85
SEMA3D-203ENST00000463315 NOP10Q9NPE3 64 aaKnown RBP9.73□□□□□ -0.85
SEMA3D-203ENST00000463315 MANBALQ9NQG1 85 aa9.73□□□□□ -0.85
SEMA3D-203ENST00000463315 ZFP30Q9Y2G7 519 aa9.73□□□□□ -0.85
SEMA3D-203ENST00000463315 DYNC2H1Q8NCM8 4307 aaKnown RBP9.73□□□□□ -0.85
SEMA3D-203ENST00000463315 TRGV11A0A075B6L2 103 aa9.72□□□□□ -0.85
SEMA3D-203ENST00000463315 IGLL5B9A064 214 aa9.72□□□□□ -0.85
SEMA3D-203ENST00000463315 PAGE4O60829 102 aa9.72□□□□□ -0.85
SEMA3D-203ENST00000463315 SMUG1Q53HV7 270 aa9.72□□□□□ -0.85
SEMA3D-203ENST00000463315 ZNF767PQ75MW2 155 aa9.72□□□□□ -0.85
SEMA3D-203ENST00000463315 KCNS1Q96KK3 526 aa9.72□□□□□ -0.85
SEMA3D-203ENST00000463315 IGHV4-4A0A075B6R2 117 aa9.71□□□□□ -0.86
SEMA3D-203ENST00000463315 ATP5G1P05496 136 aa9.71□□□□□ -0.86
SEMA3D-203ENST00000463315 PFN1P07737 140 aaKnown RBP9.71□□□□□ -0.86
SEMA3D-203ENST00000463315 DEFB130BP0DP73 79 aa9.71□□□□□ -0.86
SEMA3D-203ENST00000463315 DEFB130AP0DP74 79 aa9.71□□□□□ -0.86
SEMA3D-203ENST00000463315 TAGLN2P37802 199 aaKnown RBP9.71□□□□□ -0.86
SEMA3D-203ENST00000463315 ATP5G3P48201 142 aa9.71□□□□□ -0.86
SEMA3D-203ENST00000463315 LGALS9CQ6DKI2 356 aa9.71□□□□□ -0.86
SEMA3D-203ENST00000463315 LINC00476Q8WZB0 136 aa9.71□□□□□ -0.86
SEMA3D-203ENST00000463315 NDUFAF3Q9BU61 184 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms