RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 LINC00467Q9BRT7 94 aa10.85□□□□□ -0.67
VARS-219ENST00000461328 LENEPQ9Y5L5 61 aa10.85□□□□□ -0.67
VARS-219ENST00000461328 BIRC6Q9NR09 4857 aa10.85□□□□□ -0.67
VARS-219ENST00000461328 CTXND1A0A1B0GTU2 59 aa10.84□□□□□ -0.67
VARS-219ENST00000461328 ANXA2RQ3ZCQ2 193 aa10.84□□□□□ -0.67
VARS-219ENST00000461328 MUC21Q5SSG8 566 aa10.84□□□□□ -0.67
VARS-219ENST00000461328 SSX7Q7RTT5 188 aa10.84□□□□□ -0.67
VARS-219ENST00000461328 C5orf17Q8NAS9 161 aa10.84□□□□□ -0.67
VARS-219ENST00000461328 TMED6Q8WW62 240 aa10.84□□□□□ -0.67
VARS-219ENST00000461328 NDFIP1Q9BT67 221 aa10.84□□□□□ -0.67
VARS-219ENST00000461328 NAGKQ9UJ70 344 aa10.84□□□□□ -0.67
VARS-219ENST00000461328 TRGV2A0A075B6R0 118 aa10.83□□□□□ -0.68
VARS-219ENST00000461328 TRGV1A0A0A0MS02 117 aa10.83□□□□□ -0.68
VARS-219ENST00000461328 TRAV8-1A0A0A6YYK1 113 aa10.83□□□□□ -0.68
VARS-219ENST00000461328 K7EQM0 130 aa10.83□□□□□ -0.68
VARS-219ENST00000461328 NUDT3O95989 172 aa10.83□□□□□ -0.68
VARS-219ENST00000461328 ZNF415Q09FC8 603 aa10.83□□□□□ -0.68
VARS-219ENST00000461328 DAZ2Q13117 558 aaKnown RBP10.83□□□□□ -0.68
VARS-219ENST00000461328 ZNF345Q14585 488 aa10.83□□□□□ -0.68
VARS-219ENST00000461328 Q6ZQT7 251 aa10.83□□□□□ -0.68
VARS-219ENST00000461328 Q6ZTI0 123 aa10.83□□□□□ -0.68
VARS-219ENST00000461328 ARL6IP6Q8N6S5 226 aa10.83□□□□□ -0.68
VARS-219ENST00000461328 C11orf72Q8NBR9 251 aa10.83□□□□□ -0.68
VARS-219ENST00000461328 SERTM2A0A1B0GWG4 89 aa10.82□□□□□ -0.68
VARS-219ENST00000461328 F6UZH7 168 aa10.82□□□□□ -0.68
VARS-219ENST00000461328 M0R2N4 97 aa10.82□□□□□ -0.68
VARS-219ENST00000461328 TCL1AP56279 114 aa10.82□□□□□ -0.68
VARS-219ENST00000461328 OR5I1Q13606 314 aa10.82□□□□□ -0.68
VARS-219ENST00000461328 IBA57Q5T440 356 aaKnown RBP10.82□□□□□ -0.68
VARS-219ENST00000461328 FAM159AQ6UWV7 190 aa10.82□□□□□ -0.68
VARS-219ENST00000461328 KCNRGQ8N5I3 272 aa10.82□□□□□ -0.68
VARS-219ENST00000461328 LINC00612Q8N6U2 182 aa10.82□□□□□ -0.68
VARS-219ENST00000461328 SGK494Q96LW2 274 aa10.82□□□□□ -0.68
VARS-219ENST00000461328 CYTL1Q9NRR1 136 aa10.82□□□□□ -0.68
VARS-219ENST00000461328 TP53TG3Q9ULZ0 132 aa10.82□□□□□ -0.68
VARS-219ENST00000461328 KANTRA0A1W2PQU2 76 aa10.81□□□□□ -0.68
VARS-219ENST00000461328 GGTLC3B5MD39 225 aa10.81□□□□□ -0.68
VARS-219ENST00000461328 TCRAP04437 139 aa10.81□□□□□ -0.68
VARS-219ENST00000461328 FGF8P55075 233 aaPredicted RBP10.81□□□□□ -0.68
VARS-219ENST00000461328 UBE2G2P60604 165 aa10.81□□□□□ -0.68
VARS-219ENST00000461328 SUMO1P63165 101 aaKnown RBP10.81□□□□□ -0.68
VARS-219ENST00000461328 ZNF726P1Q15940 193 aa10.81□□□□□ -0.68
VARS-219ENST00000461328 SUN5Q8TC36 379 aa10.81□□□□□ -0.68
VARS-219ENST00000461328 ATG101Q9BSB4 218 aa10.81□□□□□ -0.68
VARS-219ENST00000461328 ZNF471Q9BX82 626 aaPredicted RBP10.81□□□□□ -0.68
VARS-219ENST00000461328 TMPRSS5Q9H3S3 457 aa10.81□□□□□ -0.68
VARS-219ENST00000461328 TREM1Q9NP99 234 aa10.81□□□□□ -0.68
VARS-219ENST00000461328 KLF12Q9Y4X4 402 aa10.81□□□□□ -0.68
VARS-219ENST00000461328 DNAH6Q9C0G6 4158 aa10.8□□□□□ -0.68
VARS-219ENST00000461328 IGLV2-18A0A075B6J9 118 aa10.8□□□□□ -0.68
VARS-219ENST00000461328 A0A0D9SG52 128 aa10.8□□□□□ -0.68
VARS-219ENST00000461328 MAP1LC3B2A6NCE7 125 aa10.8□□□□□ -0.68
VARS-219ENST00000461328 HMSDA8MTL9 139 aa10.8□□□□□ -0.68
VARS-219ENST00000461328 BCL2L11O43521 198 aa10.8□□□□□ -0.68
VARS-219ENST00000461328 PFDN1O60925 122 aa10.8□□□□□ -0.68
VARS-219ENST00000461328 IFNA7P01567 189 aa10.8□□□□□ -0.68
VARS-219ENST00000461328 TMEM183BQ1AE95 376 aa10.8□□□□□ -0.68
VARS-219ENST00000461328 RNF212Q495C1 297 aa10.8□□□□□ -0.68
VARS-219ENST00000461328 Q6AWC8 147 aa10.8□□□□□ -0.68
VARS-219ENST00000461328 TMEM183AQ8IXX5 376 aa10.8□□□□□ -0.68
VARS-219ENST00000461328 CYB561D1Q8N8Q1 229 aa10.8□□□□□ -0.68
VARS-219ENST00000461328 OR11H4Q8NGC9 324 aa10.8□□□□□ -0.68
VARS-219ENST00000461328 MAP1LC3BQ9GZQ8 125 aa10.8□□□□□ -0.68
VARS-219ENST00000461328 MRPL16Q9NX20 251 aaKnown RBP10.8□□□□□ -0.68
VARS-219ENST00000461328 TRGV11A0A075B6L2 103 aa10.79□□□□□ -0.68
VARS-219ENST00000461328 TRAV26-1A0A087WT03 109 aa10.79□□□□□ -0.68
VARS-219ENST00000461328 TRAV21A0A0B4J279 112 aa10.79□□□□□ -0.68
VARS-219ENST00000461328 A0A0J9YY99 117 aa10.79□□□□□ -0.68
VARS-219ENST00000461328 A0A1W2PRE2 83 aa10.79□□□□□ -0.68
VARS-219ENST00000461328 STOML3Q8TAV4 291 aa10.79□□□□□ -0.68
VARS-219ENST00000461328 EPDR1Q9UM22 224 aa10.79□□□□□ -0.68
VARS-219ENST00000461328 FRAS1Q86XX4 4008 aa10.78□□□□□ -0.68
VARS-219ENST00000461328 DNAH10Q8IVF4 4471 aa10.78□□□□□ -0.68
VARS-219ENST00000461328 SPINK4O60575 86 aa10.78□□□□□ -0.68
VARS-219ENST00000461328 LGALS9BQ3B8N2 356 aa10.78□□□□□ -0.68
VARS-219ENST00000461328 ZFP69Q49AA0 526 aa10.78□□□□□ -0.68
VARS-219ENST00000461328 LINC00336Q6ZUF6 198 aa10.78□□□□□ -0.68
VARS-219ENST00000461328 PRNTQ86SH4 94 aa10.78□□□□□ -0.68
VARS-219ENST00000461328 PSG8Q9UQ74 426 aa10.78□□□□□ -0.68
VARS-219ENST00000461328 HOXA5P20719 270 aa10.77□□□□□ -0.69
VARS-219ENST00000461328 EIF5AP63241 154 aaKnown RBP10.77□□□□□ -0.69
VARS-219ENST00000461328 FLI1Q01543 452 aaPredicted RBP10.77□□□□□ -0.69
VARS-219ENST00000461328 FAM213BQ8TBF2 198 aa10.77□□□□□ -0.69
VARS-219ENST00000461328 TVP23CQ96ET8 276 aa10.77□□□□□ -0.69
VARS-219ENST00000461328 IGHV3-53P01767 116 aa10.76□□□□□ -0.69
VARS-219ENST00000461328 PPT1P50897 306 aa10.76□□□□□ -0.69
VARS-219ENST00000461328 TMEM75Q8N9X5 138 aa10.76□□□□□ -0.69
VARS-219ENST00000461328 C8orf49Q96NF6 230 aa10.76□□□□□ -0.69
VARS-219ENST00000461328 SDF2L1Q9HCN8 221 aa10.76□□□□□ -0.69
VARS-219ENST00000461328 MDFICQ9P1T7 246 aa10.76□□□□□ -0.69
VARS-219ENST00000461328 FBLL1A6NHQ2 334 aaKnown RBP10.75□□□□□ -0.69
VARS-219ENST00000461328 FAM74A7A6NL05 159 aa10.75□□□□□ -0.69
VARS-219ENST00000461328 UMAD1C9J7I0 102 aa10.75□□□□□ -0.69
VARS-219ENST00000461328 PEX7O00628 323 aa10.75□□□□□ -0.69
VARS-219ENST00000461328 GCGP01275 180 aa10.75□□□□□ -0.69
VARS-219ENST00000461328 SEC11BP0C7V7 166 aa10.75□□□□□ -0.69
VARS-219ENST00000461328 FHITP49789 147 aa10.75□□□□□ -0.69
VARS-219ENST00000461328 CCL18P55774 89 aa10.75□□□□□ -0.69
VARS-219ENST00000461328 FAM3BP58499 235 aaPredicted RBP10.75□□□□□ -0.69
VARS-219ENST00000461328 SMUG1Q53HV7 270 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms