RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 RPUSD1Q9UJJ7 312 aaKnown RBP6.7□□□□□ -1.34
LSM5-208ENST00000450169 TRAV2A0A0B4J234 112 aa6.7□□□□□ -1.34
LSM5-208ENST00000450169 K7EM74 188 aa6.7□□□□□ -1.34
LSM5-208ENST00000450169 LINC00694P0DN24 101 aa6.7□□□□□ -1.34
LSM5-208ENST00000450169 CRIP2P52943 208 aaPredicted RBP6.7□□□□□ -1.34
LSM5-208ENST00000450169 Q0VFX4 171 aa6.7□□□□□ -1.34
LSM5-208ENST00000450169 PLGLAQ15195 96 aa6.7□□□□□ -1.34
LSM5-208ENST00000450169 TMEM155Q4W5P6 130 aa6.7□□□□□ -1.34
LSM5-208ENST00000450169 SPINK14Q6IE38 97 aa6.7□□□□□ -1.34
LSM5-208ENST00000450169 ZNF833PQ6ZTB9 187 aa6.7□□□□□ -1.34
LSM5-208ENST00000450169 VKORC1Q9BQB6 163 aa6.7□□□□□ -1.34
LSM5-208ENST00000450169 SVILO95425 2214 aa6.7□□□□□ -1.34
LSM5-208ENST00000450169 TECTAO75443 2155 aa6.69□□□□□ -1.34
LSM5-208ENST00000450169 SMIM9A6NGZ8 99 aa6.69□□□□□ -1.34
LSM5-208ENST00000450169 DUSP14O95147 198 aaKnown RBP6.69□□□□□ -1.34
LSM5-208ENST00000450169 CFC1BP0CG36 223 aa6.69□□□□□ -1.34
LSM5-208ENST00000450169 CFC1P0CG37 223 aa6.69□□□□□ -1.34
LSM5-208ENST00000450169 MALP21145 153 aa6.69□□□□□ -1.34
LSM5-208ENST00000450169 FOLR3P41439 243 aa6.69□□□□□ -1.34
LSM5-208ENST00000450169 MZT1Q08AG7 82 aa6.69□□□□□ -1.34
LSM5-208ENST00000450169 LY6DQ14210 128 aa6.69□□□□□ -1.34
LSM5-208ENST00000450169 PRR25Q96S07 402 aa6.69□□□□□ -1.34
LSM5-208ENST00000450169 CNFNQ9BYD5 112 aa6.69□□□□□ -1.34
LSM5-208ENST00000450169 HLA-DMBP28068 263 aa6.69□□□□□ -1.34
LSM5-208ENST00000450169 RPL13AP40429 203 aaKnown RBP6.69□□□□□ -1.34
LSM5-208ENST00000450169 TRPT1Q86TN4 253 aaKnown RBP6.69□□□□□ -1.34
LSM5-208ENST00000450169 DTX2Q86UW9 622 aa6.69□□□□□ -1.34
LSM5-208ENST00000450169 CTSZQ9UBR2 303 aa6.69□□□□□ -1.34
LSM5-208ENST00000450169 PRO1854Q9UHT4 67 aa6.69□□□□□ -1.34
LSM5-208ENST00000450169 TRAV25A0A0B4J276 109 aa6.68□□□□□ -1.34
LSM5-208ENST00000450169 TEX49A0A1B0GTD5 131 aa6.68□□□□□ -1.34
LSM5-208ENST00000450169 CEACAM4O75871 244 aa6.68□□□□□ -1.34
LSM5-208ENST00000450169 COX6B1P14854 86 aa6.68□□□□□ -1.34
LSM5-208ENST00000450169 SLC25A16P16260 332 aa6.68□□□□□ -1.34
LSM5-208ENST00000450169 GLRXP35754 106 aa6.68□□□□□ -1.34
LSM5-208ENST00000450169 MRPL23Q16540 153 aaKnown RBP6.68□□□□□ -1.34
LSM5-208ENST00000450169 PVRIGQ6DKI7 326 aa6.68□□□□□ -1.34
LSM5-208ENST00000450169 COX8CQ7Z4L0 72 aa6.68□□□□□ -1.34
LSM5-208ENST00000450169 DEFB123Q8N688 67 aa6.68□□□□□ -1.34
LSM5-208ENST00000450169 SHANK2-AS3Q9BTD1 123 aa6.68□□□□□ -1.34
LSM5-208ENST00000450169 TIMM23O14925 209 aa6.67□□□□□ -1.34
LSM5-208ENST00000450169 WIPF1O43516 503 aa6.67□□□□□ -1.34
LSM5-208ENST00000450169 LYZL6O75951 148 aa6.67□□□□□ -1.34
LSM5-208ENST00000450169 IL11RAQ14626 422 aa6.67□□□□□ -1.34
LSM5-208ENST00000450169 DUX4L9Q6RFH8 374 aaPredicted RBP6.67□□□□□ -1.34
LSM5-208ENST00000450169 TPSG1Q9NRR2 321 aa6.67□□□□□ -1.34
LSM5-208ENST00000450169 PLA2G2DQ9UNK4 145 aa6.67□□□□□ -1.34
LSM5-208ENST00000450169 INTS1Q8N201 2190 aaKnown RBP6.67□□□□□ -1.34
LSM5-208ENST00000450169 DSCAML1Q8TD84 2053 aa6.67□□□□□ -1.34
LSM5-208ENST00000450169 GPR179Q6PRD1 2367 aa6.67□□□□□ -1.34
LSM5-208ENST00000450169 LOC107984640A0A0U1RRK4 108 aa6.67□□□□□ -1.34
LSM5-208ENST00000450169 IGLV2-23P01705 113 aa6.67□□□□□ -1.34
LSM5-208ENST00000450169 APELAP0DMC3 54 aa6.67□□□□□ -1.34
LSM5-208ENST00000450169 IGHV1-2P23083 117 aa6.67□□□□□ -1.34
LSM5-208ENST00000450169 TMEM30BQ3MIR4 351 aa6.67□□□□□ -1.34
LSM5-208ENST00000450169 LCE2AQ5TA79 106 aaPredicted RBP6.67□□□□□ -1.34
LSM5-208ENST00000450169 LINC00574Q9H8X3 128 aa6.67□□□□□ -1.34
LSM5-208ENST00000450169 ASPMQ8IZT6 3477 aa6.66□□□□□ -1.34
LSM5-208ENST00000450169 IGKV2-40A0A087WW87 121 aaPredicted RBP6.66□□□□□ -1.34
LSM5-208ENST00000450169 A0A0J9YY99 117 aa6.66□□□□□ -1.34
LSM5-208ENST00000450169 H3BRN7 92 aa6.66□□□□□ -1.34
LSM5-208ENST00000450169 M0R2P5 195 aa6.66□□□□□ -1.34
LSM5-208ENST00000450169 LGALS9O00182 355 aa6.66□□□□□ -1.34
LSM5-208ENST00000450169 IGKV2D-40P01614 121 aaPredicted RBP6.66□□□□□ -1.34
LSM5-208ENST00000450169 ORM1P02763 201 aa6.66□□□□□ -1.34
LSM5-208ENST00000450169 RPL7P18124 248 aaKnown RBP6.66□□□□□ -1.34
LSM5-208ENST00000450169 ZNF80P51504 273 aaPredicted RBP6.66□□□□□ -1.34
LSM5-208ENST00000450169 HES1Q14469 280 aa6.66□□□□□ -1.34
LSM5-208ENST00000450169 ZNF575Q86XF7 245 aa6.66□□□□□ -1.34
LSM5-208ENST00000450169 NEXN-AS1Q8NBZ9 246 aa6.66□□□□□ -1.34
LSM5-208ENST00000450169 KLHL30-AS1Q8NEE0 82 aa6.66□□□□□ -1.34
LSM5-208ENST00000450169 MAFAQ8NHW3 353 aaPredicted RBP6.66□□□□□ -1.34
LSM5-208ENST00000450169 BAALCQ8WXS3 180 aa6.66□□□□□ -1.34
LSM5-208ENST00000450169 TIMD4Q96H15 378 aa6.66□□□□□ -1.34
LSM5-208ENST00000450169 SIGLEC9Q9Y336 463 aa6.66□□□□□ -1.34
LSM5-208ENST00000450169 LY6G6EA0A0G2JKS1 128 aa6.66□□□□□ -1.34
LSM5-208ENST00000450169 H3BMM0 161 aa6.66□□□□□ -1.34
LSM5-208ENST00000450169 J3KT08 172 aa6.66□□□□□ -1.34
LSM5-208ENST00000450169 NDUFA7O95182 113 aa6.66□□□□□ -1.34
LSM5-208ENST00000450169 IGHV3-30P01768 117 aa6.66□□□□□ -1.34
LSM5-208ENST00000450169 IGHV3-30-5P0DP03 117 aa6.66□□□□□ -1.34
LSM5-208ENST00000450169 VMA21Q3ZAQ7 101 aa6.66□□□□□ -1.34
LSM5-208ENST00000450169 FAM201AQ5SY85 155 aa6.66□□□□□ -1.34
LSM5-208ENST00000450169 C9orf153Q5TBE3 101 aa6.66□□□□□ -1.34
LSM5-208ENST00000450169 NRACQ8N912 160 aa6.66□□□□□ -1.34
LSM5-208ENST00000450169 UBE2WQ96B02 151 aa6.66□□□□□ -1.34
LSM5-208ENST00000450169 SCGB3A1Q96QR1 104 aa6.66□□□□□ -1.34
LSM5-208ENST00000450169 HES7Q9BYE0 225 aa6.66□□□□□ -1.34
LSM5-208ENST00000450169 TTTY12Q9BZ98 90 aa6.66□□□□□ -1.34
LSM5-208ENST00000450169 U3KQA8 63 aa6.66□□□□□ -1.34
LSM5-208ENST00000450169 TTC28Q96AY4 2481 aa6.66□□□□□ -1.34
LSM5-208ENST00000450169 ARFGEF3Q5TH69 2177 aa6.66□□□□□ -1.34
LSM5-208ENST00000450169 TRBV7-7A0A0K0K1E9 115 aa6.65□□□□□ -1.34
LSM5-208ENST00000450169 NPFFO15130 113 aa6.65□□□□□ -1.34
LSM5-208ENST00000450169 MRPS12O15235 138 aaKnown RBP6.65□□□□□ -1.34
LSM5-208ENST00000450169 CFIP05156 583 aa6.65□□□□□ -1.34
LSM5-208ENST00000450169 ATXN8Q156A1 80 aa6.65□□□□□ -1.34
LSM5-208ENST00000450169 ZNF56Q15929 161 aa6.65□□□□□ -1.34
LSM5-208ENST00000450169 LINC01620Q4KN68 170 aa6.65□□□□□ -1.34
LSM5-208ENST00000450169 PMS2CLQ68D20 193 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms