RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 ZNF680Q8NEM1 530 aa12.93□□□□□ -0.34
SMPD4-210ENST00000441135 Q8TAT8 98 aa12.93□□□□□ -0.34
SMPD4-210ENST00000441135 MAP1LC3BQ9GZQ8 125 aa12.93□□□□□ -0.34
SMPD4-210ENST00000441135 ARL2-SNX15V9GYD0 113 aa12.93□□□□□ -0.34
SMPD4-210ENST00000441135 K7EQM0 130 aa12.92□□□□□ -0.34
SMPD4-210ENST00000441135 TCRAP04437 139 aa12.92□□□□□ -0.34
SMPD4-210ENST00000441135 PRM2P04554 102 aa12.92□□□□□ -0.34
SMPD4-210ENST00000441135 RNASE4P34096 147 aaKnown RBP12.92□□□□□ -0.34
SMPD4-210ENST00000441135 DAD1P61803 113 aa12.92□□□□□ -0.34
SMPD4-210ENST00000441135 PRR9Q5T870 116 aa12.92□□□□□ -0.34
SMPD4-210ENST00000441135 Q6AWC8 147 aa12.92□□□□□ -0.34
SMPD4-210ENST00000441135 VPS13DQ5THJ4 4388 aa12.92□□□□□ -0.34
SMPD4-210ENST00000441135 P0DMU3 169 aa12.91□□□□□ -0.34
SMPD4-210ENST00000441135 FAM231AP0DMU4 169 aa12.91□□□□□ -0.34
SMPD4-210ENST00000441135 FAM231CP0DMU5 169 aa12.91□□□□□ -0.34
SMPD4-210ENST00000441135 HTN1P15515 57 aa12.91□□□□□ -0.34
SMPD4-210ENST00000441135 SUMO1P63165 101 aaKnown RBP12.91□□□□□ -0.34
SMPD4-210ENST00000441135 LGALSLQ3ZCW2 172 aaPredicted RBP12.91□□□□□ -0.34
SMPD4-210ENST00000441135 EIF5AL1Q6IS14 154 aaKnown RBP12.91□□□□□ -0.34
SMPD4-210ENST00000441135 EIF4E3Q8N5X7 224 aaKnown RBP12.91□□□□□ -0.34
SMPD4-210ENST00000441135 MBD3L1Q8WWY6 194 aa12.91□□□□□ -0.34
SMPD4-210ENST00000441135 EPDR1Q9UM22 224 aa12.91□□□□□ -0.34
SMPD4-210ENST00000441135 RPH3ALQ9UNE2 315 aa12.91□□□□□ -0.34
SMPD4-210ENST00000441135 GNG5P63218 68 aa12.9□□□□□ -0.34
SMPD4-210ENST00000441135 DAZ2Q13117 558 aaKnown RBP12.9□□□□□ -0.34
SMPD4-210ENST00000441135 IBA57Q5T440 356 aaKnown RBP12.9□□□□□ -0.34
SMPD4-210ENST00000441135 IQCF2Q8IXL9 164 aa12.9□□□□□ -0.34
SMPD4-210ENST00000441135 LINC00612Q8N6U2 182 aa12.9□□□□□ -0.34
SMPD4-210ENST00000441135 CYB561D1Q8N8Q1 229 aa12.9□□□□□ -0.34
SMPD4-210ENST00000441135 TCEAL7Q9BRU2 100 aa12.9□□□□□ -0.34
SMPD4-210ENST00000441135 ATG101Q9BSB4 218 aa12.9□□□□□ -0.34
SMPD4-210ENST00000441135 PLA2G2EQ9NZK7 142 aa12.9□□□□□ -0.34
SMPD4-210ENST00000441135 FAM74A7A6NL05 159 aa12.89□□□□□ -0.35
SMPD4-210ENST00000441135 FHITP49789 147 aa12.89□□□□□ -0.35
SMPD4-210ENST00000441135 RAB5CP51148 216 aa12.89□□□□□ -0.35
SMPD4-210ENST00000441135 FGF8P55075 233 aaPredicted RBP12.89□□□□□ -0.35
SMPD4-210ENST00000441135 TMEM75Q8N9X5 138 aa12.89□□□□□ -0.35
SMPD4-210ENST00000441135 NDFIP1Q9BT67 221 aa12.89□□□□□ -0.35
SMPD4-210ENST00000441135 TMPRSS5Q9H3S3 457 aa12.89□□□□□ -0.35
SMPD4-210ENST00000441135 KMT2AQ03164 3969 aa12.88□□□□□ -0.35
SMPD4-210ENST00000441135 hCG_2014768A0A024R1R8 64 aa12.88□□□□□ -0.35
SMPD4-210ENST00000441135 IGHV1OR15-1A0A075B7D0 117 aa12.88□□□□□ -0.35
SMPD4-210ENST00000441135 SNURFLB1AK76 121 aa12.88□□□□□ -0.35
SMPD4-210ENST00000441135 RGS13O14921 159 aa12.88□□□□□ -0.35
SMPD4-210ENST00000441135 SLC51BQ86UW2 128 aa12.88□□□□□ -0.35
SMPD4-210ENST00000441135 POM121L12Q8N7R1 296 aa12.88□□□□□ -0.35
SMPD4-210ENST00000441135 C11orf72Q8NBR9 251 aa12.88□□□□□ -0.35
SMPD4-210ENST00000441135 HIST1H2BAQ96A08 127 aa12.88□□□□□ -0.35
SMPD4-210ENST00000441135 NOP10Q9NPE3 64 aaKnown RBP12.88□□□□□ -0.35
SMPD4-210ENST00000441135 TRAV8-1A0A0A6YYK1 113 aa12.87□□□□□ -0.35
SMPD4-210ENST00000441135 CBY3A6NI87 242 aa12.87□□□□□ -0.35
SMPD4-210ENST00000441135 HTN3P15516 51 aa12.87□□□□□ -0.35
SMPD4-210ENST00000441135 FAM213BQ8TBF2 198 aa12.87□□□□□ -0.35
SMPD4-210ENST00000441135 TREM1Q9NP99 234 aa12.87□□□□□ -0.35
SMPD4-210ENST00000441135 IGLV2-11P01706 119 aa12.86□□□□□ -0.35
SMPD4-210ENST00000441135 TCL1AP56279 114 aa12.86□□□□□ -0.35
SMPD4-210ENST00000441135 FLI1Q01543 452 aaPredicted RBP12.86□□□□□ -0.35
SMPD4-210ENST00000441135 TDRG1Q3Y452 100 aa12.86□□□□□ -0.35
SMPD4-210ENST00000441135 TVP23CQ96ET8 276 aa12.86□□□□□ -0.35
SMPD4-210ENST00000441135 C18orf15Q96N68 181 aa12.86□□□□□ -0.35
SMPD4-210ENST00000441135 PSG8Q9UQ74 426 aa12.86□□□□□ -0.35
SMPD4-210ENST00000441135 TRAV21A0A0B4J279 112 aa12.85□□□□□ -0.35
SMPD4-210ENST00000441135 IFNA7P01567 189 aa12.85□□□□□ -0.35
SMPD4-210ENST00000441135 ATP5G1P05496 136 aa12.85□□□□□ -0.35
SMPD4-210ENST00000441135 DEFB130BP0DP73 79 aa12.85□□□□□ -0.35
SMPD4-210ENST00000441135 DEFB130AP0DP74 79 aa12.85□□□□□ -0.35
SMPD4-210ENST00000441135 ATP5G3P48201 142 aa12.85□□□□□ -0.35
SMPD4-210ENST00000441135 PPT1P50897 306 aa12.85□□□□□ -0.35
SMPD4-210ENST00000441135 UBE2G2P60604 165 aa12.85□□□□□ -0.35
SMPD4-210ENST00000441135 SFT2D1Q8WV19 159 aa12.85□□□□□ -0.35
SMPD4-210ENST00000441135 TP53TG3Q9ULZ0 132 aa12.85□□□□□ -0.35
SMPD4-210ENST00000441135 TRAV1-1A0A0B4J248 108 aa12.84□□□□□ -0.35
SMPD4-210ENST00000441135 F6UZH7 168 aa12.84□□□□□ -0.35
SMPD4-210ENST00000441135 PEX7O00628 323 aa12.84□□□□□ -0.35
SMPD4-210ENST00000441135 H2AFB1P0C5Y9 115 aa12.84□□□□□ -0.35
SMPD4-210ENST00000441135 ZFP69Q49AA0 526 aa12.84□□□□□ -0.35
SMPD4-210ENST00000441135 SAPCD1Q5SSQ6 148 aa12.84□□□□□ -0.35
SMPD4-210ENST00000441135 C9orf62Q8N4C0 152 aa12.84□□□□□ -0.35
SMPD4-210ENST00000441135 TRGV11A0A075B6L2 103 aa12.83□□□□□ -0.36
SMPD4-210ENST00000441135 SULT1A2P50226 295 aa12.83□□□□□ -0.36
SMPD4-210ENST00000441135 TMEM88Q6PEY1 159 aa12.83□□□□□ -0.36
SMPD4-210ENST00000441135 FAM159AQ6UWV7 190 aa12.83□□□□□ -0.36
SMPD4-210ENST00000441135 GSN-AS1Q9NRJ2 163 aa12.83□□□□□ -0.36
SMPD4-210ENST00000441135 TRBV6-1A0A0K0K1D8 114 aa12.82□□□□□ -0.36
SMPD4-210ENST00000441135 SPINK4O60575 86 aa12.82□□□□□ -0.36
SMPD4-210ENST00000441135 ZNF415Q09FC8 603 aa12.82□□□□□ -0.36
SMPD4-210ENST00000441135 LGALS9BQ3B8N2 356 aa12.82□□□□□ -0.36
SMPD4-210ENST00000441135 Q6ZQT7 251 aa12.82□□□□□ -0.36
SMPD4-210ENST00000441135 UBE2DNLQ8IWF7 75 aa12.82□□□□□ -0.36
SMPD4-210ENST00000441135 KLF12Q9Y4X4 402 aa12.82□□□□□ -0.36
SMPD4-210ENST00000441135 DNAH10Q8IVF4 4471 aa12.82□□□□□ -0.36
SMPD4-210ENST00000441135 SMUG1Q53HV7 270 aa12.81□□□□□ -0.36
SMPD4-210ENST00000441135 C15orf53Q8NAA6 179 aa12.81□□□□□ -0.36
SMPD4-210ENST00000441135 KCNS1Q96KK3 526 aa12.81□□□□□ -0.36
SMPD4-210ENST00000441135 DNAH6Q9C0G6 4158 aa12.81□□□□□ -0.36
SMPD4-210ENST00000441135 FRAS1Q86XX4 4008 aa12.8□□□□□ -0.36
SMPD4-210ENST00000441135 A0A1B0GVG6 124 aa12.8□□□□□ -0.36
SMPD4-210ENST00000441135 TEX46H3BTG2 121 aa12.8□□□□□ -0.36
SMPD4-210ENST00000441135 PFN1P07737 140 aaKnown RBP12.8□□□□□ -0.36
SMPD4-210ENST00000441135 RNF212Q495C1 297 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms