RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 FAM213BQ8TBF2 198 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 RDH5Q92781 318 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 MAL2Q969L2 176 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 C16orf74Q96GX8 76 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 ABHD14BQ96IU4 210 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 DERL3Q96Q80 235 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 EBPLQ9BY08 206 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 PARP12Q9H0J9 701 aaKnown RBP2.88□□□□□ -1.95
HMGB3-203ENST00000430118 ZNF442Q9H7R0 627 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 TNFRSF19Q9NS68 423 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 TP53TG3Q9ULZ0 132 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 ANAPC10Q9UM13 185 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 RCL1Q9Y2P8 373 aaKnown RBP2.88□□□□□ -1.95
HMGB3-203ENST00000430118 SPCS1Q9Y6A9 102 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 FREM3P0C091 2139 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 EXPH5Q8NEV8 1989 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 IGLV3-32A0A0A0MS00 114 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 A0A0A6YYD5 115 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 MUC21A0A0G2JKD1 596 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 MUC21A0A140T8X8 626 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 CLPSL1A2RUU4 121 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 F6UB75 175 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 SMKR1H3BMG3 65 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 C3orf84H3BNL1 204 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 M0R2Z0 102 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 SLC16A7O60669 478 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 MRPL33O75394 65 aaKnown RBP2.87□□□□□ -1.95
HMGB3-203ENST00000430118 ZNF324O75467 553 aaPredicted RBP2.87□□□□□ -1.95
HMGB3-203ENST00000430118 DHRS3O75911 302 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 C3orf79P0CE67 100 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 FABP2P12104 132 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 SLC25A6P12236 298 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 PMCHP20382 165 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 HRH1P35367 487 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 LYZP61626 148 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 RPL23P62829 140 aaKnown RBP2.87□□□□□ -1.95
HMGB3-203ENST00000430118 ZNF117Q03924 483 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 Q499Y3 187 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 C9orf129Q5T035 196 aaKnown RBP2.87□□□□□ -1.95
HMGB3-203ENST00000430118 KPRPQ5T749 579 aaPredicted RBP2.87□□□□□ -1.95
HMGB3-203ENST00000430118 SLC48A1Q6P1K1 146 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 LCN15Q6UWW0 184 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 ZNF621Q6ZSS3 439 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 Q6ZUT4 128 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 CAMK2N1Q7Z7J9 78 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 ZNF584Q8IVC4 421 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 OSR2Q8N2R0 312 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 CD177Q8N6Q3 437 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 ZNF433Q8N7K0 673 aaPredicted RBP2.87□□□□□ -1.95
HMGB3-203ENST00000430118 MRPL30Q8TCC3 161 aaKnown RBP2.87□□□□□ -1.95
HMGB3-203ENST00000430118 RNF138Q8WVD3 245 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 MBD3L1Q8WWY6 194 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 OR5P3Q8WZ94 311 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 LSM10Q969L4 123 aaKnown RBP2.87□□□□□ -1.95
HMGB3-203ENST00000430118 SMIM3Q9BZL3 60 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 MAP1LC3AQ9H492 121 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 RETNQ9HD89 108 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 ANXA10Q9UJ72 324 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 ZNF257Q9Y2Q1 563 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 ROS1P08922 2347 aa2.87□□□□□ -1.95
HMGB3-203ENST00000430118 AGRNO00468 2067 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 NINQ8N4C6 2090 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 SACSQ9NZJ4 4579 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 TRGV10A0A0A0MS01 117 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 A0A0J9YW62 118 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 LOC102725191A0A1B0GVB3 256 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 A0A1W2PRF3 423 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 A0A1W2PRM7 423 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 TMEM262E9PQX1 116 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 FNDC10F2Z333 226 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 F5H5K5 113 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 ISLRO14498 428 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 SOCS1O15524 211 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 NUPR1O60356 82 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 ORM2P19652 201 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 OR1E2P47887 323 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 ZNF133P52736 654 aaPredicted RBP2.86□□□□□ -1.95
HMGB3-203ENST00000430118 KRTDAPP60985 99 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 TNFAIP6P98066 277 aaPredicted RBP2.86□□□□□ -1.95
HMGB3-203ENST00000430118 PMVKQ15126 192 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 PSMG4Q5JS54 123 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 OTPQ5XKR4 325 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 Q6AWC8 147 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 Q6ZS49 121 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 TMEM61Q8N0U2 210 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 TMEM86BQ8N661 226 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 NPBQ8NG41 125 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 OR8B12Q8NGG6 310 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 OR8B3Q8NGG8 313 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 BORCS7Q96B45 105 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 OR4C12Q96R67 309 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 OR8B2Q96RD0 313 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 SMIM7Q9BQ49 75 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 PECRQ9BY49 303 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 TAAR3PQ9P1P4 343 aa2.86□□□□□ -1.95
HMGB3-203ENST00000430118 SOX21Q9Y651 276 aaPredicted RBP2.86□□□□□ -1.95
HMGB3-203ENST00000430118 HYDINQ4G0P3 5121 aa2.85□□□□□ -1.95
HMGB3-203ENST00000430118 DYNC2H1Q8NCM8 4307 aaKnown RBP2.85□□□□□ -1.95
HMGB3-203ENST00000430118 IGHV1-18A0A0C4DH31 117 aa2.85□□□□□ -1.95
HMGB3-203ENST00000430118 SYS1-DBNDD2H3BUS1 97 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms