RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 ZNF345Q14585 488 aa7.77□□□□□ -1.17
USP49-204ENST00000423567 EIF4E3Q8N5X7 224 aaKnown RBP7.77□□□□□ -1.17
USP49-204ENST00000423567 Q8TAT8 98 aa7.77□□□□□ -1.17
USP49-204ENST00000423567 TMED6Q8WW62 240 aa7.77□□□□□ -1.17
USP49-204ENST00000423567 ST6GAL2Q96JF0 529 aa7.77□□□□□ -1.17
USP49-204ENST00000423567 LENEPQ9Y5L5 61 aa7.77□□□□□ -1.17
USP49-204ENST00000423567 A0A0D9SG52 128 aa7.76□□□□□ -1.17
USP49-204ENST00000423567 CTXND1A0A1B0GTU2 59 aa7.76□□□□□ -1.17
USP49-204ENST00000423567 SERTM2A0A1B0GWG4 89 aa7.76□□□□□ -1.17
USP49-204ENST00000423567 KANTRA0A1W2PQU2 76 aa7.76□□□□□ -1.17
USP49-204ENST00000423567 HMSDA8MTL9 139 aa7.76□□□□□ -1.17
USP49-204ENST00000423567 ZNF324O75467 553 aaPredicted RBP7.76□□□□□ -1.17
USP49-204ENST00000423567 P0DMU3 169 aa7.76□□□□□ -1.17
USP49-204ENST00000423567 FAM231AP0DMU4 169 aa7.76□□□□□ -1.17
USP49-204ENST00000423567 FAM231CP0DMU5 169 aa7.76□□□□□ -1.17
USP49-204ENST00000423567 GOLT1AQ6ZVE7 132 aa7.76□□□□□ -1.17
USP49-204ENST00000423567 KCNRGQ8N5I3 272 aa7.76□□□□□ -1.17
USP49-204ENST00000423567 ZFAND2AQ8N6M9 145 aa7.76□□□□□ -1.17
USP49-204ENST00000423567 C5orf17Q8NAS9 161 aa7.76□□□□□ -1.17
USP49-204ENST00000423567 LINC00467Q9BRT7 94 aa7.76□□□□□ -1.17
USP49-204ENST00000423567 ALMS1Q8TCU4 4167 aa7.76□□□□□ -1.17
USP49-204ENST00000423567 IGHV1OR15-1A0A075B7D0 117 aa7.75□□□□□ -1.17
USP49-204ENST00000423567 F5H768 121 aa7.75□□□□□ -1.17
USP49-204ENST00000423567 EIF5AP63241 154 aaKnown RBP7.75□□□□□ -1.17
USP49-204ENST00000423567 ANXA2RQ3ZCQ2 193 aa7.75□□□□□ -1.17
USP49-204ENST00000423567 NDFIP1Q9BT67 221 aa7.75□□□□□ -1.17
USP49-204ENST00000423567 CYTL1Q9NRR1 136 aa7.75□□□□□ -1.17
USP49-204ENST00000423567 PFDN1O60925 122 aa7.74□□□□□ -1.17
USP49-204ENST00000423567 GNG5P63218 68 aa7.74□□□□□ -1.17
USP49-204ENST00000423567 DAZ2Q13117 558 aaKnown RBP7.74□□□□□ -1.17
USP49-204ENST00000423567 PRR9Q5T870 116 aa7.74□□□□□ -1.17
USP49-204ENST00000423567 TMEM88Q6PEY1 159 aa7.74□□□□□ -1.17
USP49-204ENST00000423567 UBE2DNLQ8IWF7 75 aa7.74□□□□□ -1.17
USP49-204ENST00000423567 C15orf53Q8NAA6 179 aa7.74□□□□□ -1.17
USP49-204ENST00000423567 STOML3Q8TAV4 291 aa7.74□□□□□ -1.17
USP49-204ENST00000423567 SUN5Q8TC36 379 aa7.74□□□□□ -1.17
USP49-204ENST00000423567 ZNF471Q9BX82 626 aaPredicted RBP7.74□□□□□ -1.17
USP49-204ENST00000423567 A0A1W2PRE2 83 aa7.73□□□□□ -1.17
USP49-204ENST00000423567 GAGE12BA1L429 117 aa7.73□□□□□ -1.17
USP49-204ENST00000423567 MAP1LC3B2A6NCE7 125 aa7.73□□□□□ -1.17
USP49-204ENST00000423567 BCL2L11O43521 198 aa7.73□□□□□ -1.17
USP49-204ENST00000423567 GAGE7O76087 117 aa7.73□□□□□ -1.17
USP49-204ENST00000423567 TCRAP04437 139 aa7.73□□□□□ -1.17
USP49-204ENST00000423567 GAGE12FP0CL80 117 aa7.73□□□□□ -1.17
USP49-204ENST00000423567 GAGE12GP0CL81 117 aa7.73□□□□□ -1.17
USP49-204ENST00000423567 GAGE12IP0CL82 117 aa7.73□□□□□ -1.17
USP49-204ENST00000423567 SUMO1P63165 101 aaKnown RBP7.73□□□□□ -1.17
USP49-204ENST00000423567 IBA57Q5T440 356 aaKnown RBP7.73□□□□□ -1.17
USP49-204ENST00000423567 FAM159AQ6UWV7 190 aa7.73□□□□□ -1.17
USP49-204ENST00000423567 SSX7Q7RTT5 188 aa7.73□□□□□ -1.17
USP49-204ENST00000423567 OR11H4Q8NGC9 324 aa7.73□□□□□ -1.17
USP49-204ENST00000423567 KRTAP4-8Q9BYQ9 185 aa7.73□□□□□ -1.17
USP49-204ENST00000423567 NKX6-2Q9C056 277 aaPredicted RBP7.73□□□□□ -1.17
USP49-204ENST00000423567 MAP1LC3BQ9GZQ8 125 aa7.73□□□□□ -1.17
USP49-204ENST00000423567 TREM1Q9NP99 234 aa7.73□□□□□ -1.17
USP49-204ENST00000423567 GSN-AS1Q9NRJ2 163 aa7.73□□□□□ -1.17
USP49-204ENST00000423567 LYSTQ99698 3801 aa7.73□□□□□ -1.17
USP49-204ENST00000423567 DNAH1Q9P2D7 4330 aa7.72□□□□□ -1.17
USP49-204ENST00000423567 TRGV11A0A075B6L2 103 aa7.72□□□□□ -1.17
USP49-204ENST00000423567 TRGV2A0A075B6R0 118 aa7.72□□□□□ -1.17
USP49-204ENST00000423567 TRGV1A0A0A0MS02 117 aa7.72□□□□□ -1.17
USP49-204ENST00000423567 TRAV8-1A0A0A6YYK1 113 aa7.72□□□□□ -1.17
USP49-204ENST00000423567 FBLL1A6NHQ2 334 aaKnown RBP7.72□□□□□ -1.17
USP49-204ENST00000423567 UMAD1C9J7I0 102 aa7.72□□□□□ -1.17
USP49-204ENST00000423567 IFNA7P01567 189 aa7.72□□□□□ -1.17
USP49-204ENST00000423567 SEC11BP0C7V7 166 aa7.72□□□□□ -1.17
USP49-204ENST00000423567 TCL1AP56279 114 aa7.72□□□□□ -1.17
USP49-204ENST00000423567 ZNF415Q09FC8 603 aa7.72□□□□□ -1.17
USP49-204ENST00000423567 OR5I1Q13606 314 aa7.72□□□□□ -1.17
USP49-204ENST00000423567 ZNF726P1Q15940 193 aa7.72□□□□□ -1.17
USP49-204ENST00000423567 MUC21Q5SSG8 566 aa7.72□□□□□ -1.17
USP49-204ENST00000423567 Q6AWC8 147 aa7.72□□□□□ -1.17
USP49-204ENST00000423567 LINC00612Q8N6U2 182 aa7.72□□□□□ -1.17
USP49-204ENST00000423567 POM121L12Q8N7R1 296 aa7.72□□□□□ -1.17
USP49-204ENST00000423567 CYB561D1Q8N8Q1 229 aa7.72□□□□□ -1.17
USP49-204ENST00000423567 C11orf72Q8NBR9 251 aa7.72□□□□□ -1.17
USP49-204ENST00000423567 NAGKQ9UJ70 344 aa7.72□□□□□ -1.17
USP49-204ENST00000423567 EPDR1Q9UM22 224 aa7.72□□□□□ -1.17
USP49-204ENST00000423567 TRAV21A0A0B4J279 112 aa7.71□□□□□ -1.18
USP49-204ENST00000423567 GGTLC3B5MD39 225 aa7.71□□□□□ -1.18
USP49-204ENST00000423567 EIF4EBP3O60516 100 aaPredicted RBP7.71□□□□□ -1.18
USP49-204ENST00000423567 PPT1P50897 306 aa7.71□□□□□ -1.18
USP49-204ENST00000423567 FGF8P55075 233 aaPredicted RBP7.71□□□□□ -1.18
USP49-204ENST00000423567 UBE2G2P60604 165 aa7.71□□□□□ -1.18
USP49-204ENST00000423567 FLI1Q01543 452 aaPredicted RBP7.71□□□□□ -1.18
USP49-204ENST00000423567 ZFP69Q49AA0 526 aa7.71□□□□□ -1.18
USP49-204ENST00000423567 Q6ZTI0 123 aa7.71□□□□□ -1.18
USP49-204ENST00000423567 TMUB2Q71RG4 321 aa7.71□□□□□ -1.18
USP49-204ENST00000423567 SGK494Q96LW2 274 aa7.71□□□□□ -1.18
USP49-204ENST00000423567 ATG101Q9BSB4 218 aa7.71□□□□□ -1.18
USP49-204ENST00000423567 TMPRSS5Q9H3S3 457 aa7.71□□□□□ -1.18
USP49-204ENST00000423567 F6UZH7 168 aa7.7□□□□□ -1.18
USP49-204ENST00000423567 NUDT3O95989 172 aa7.7□□□□□ -1.18
USP49-204ENST00000423567 TPT1P13693 172 aaKnown RBP7.7□□□□□ -1.18
USP49-204ENST00000423567 TMEM183BQ1AE95 376 aa7.7□□□□□ -1.18
USP49-204ENST00000423567 LGALS9BQ3B8N2 356 aa7.7□□□□□ -1.18
USP49-204ENST00000423567 Q6ZNX1 250 aa7.7□□□□□ -1.18
USP49-204ENST00000423567 Q6ZQT7 251 aa7.7□□□□□ -1.18
USP49-204ENST00000423567 PRNTQ86SH4 94 aa7.7□□□□□ -1.18
USP49-204ENST00000423567 TMEM183AQ8IXX5 376 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms