RNA–Protein interactions for RNA: ENST00000393211.3

COL17A1-203, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL17A1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-203ENST00000393211 ORMDL2Q53FV1 153 aa7.67□□□□□ -1.18
COL17A1-203ENST00000393211 RNF182Q8N6D2 247 aa7.67□□□□□ -1.18
COL17A1-203ENST00000393211 CCDC140Q96MF4 163 aa7.67□□□□□ -1.18
COL17A1-203ENST00000393211 C11orf21Q9P2W6 132 aa7.67□□□□□ -1.18
COL17A1-203ENST00000393211 CENPVL3A0A0U1RRI6 287 aa7.67□□□□□ -1.18
COL17A1-203ENST00000393211 E9PLD3 99 aa7.67□□□□□ -1.18
COL17A1-203ENST00000393211 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.67□□□□□ -1.18
COL17A1-203ENST00000393211 H7C1H1 209 aa7.67□□□□□ -1.18
COL17A1-203ENST00000393211 ATP6V0E1O15342 81 aa7.67□□□□□ -1.18
COL17A1-203ENST00000393211 ZNF207O43670 478 aaKnown RBP7.67□□□□□ -1.18
COL17A1-203ENST00000393211 LY6HO94772 140 aa7.67□□□□□ -1.18
COL17A1-203ENST00000393211 MED14OSP0DP75 135 aa7.67□□□□□ -1.18
COL17A1-203ENST00000393211 GRNP28799 593 aaKnown RBP7.67□□□□□ -1.18
COL17A1-203ENST00000393211 C8orf86Q6ZUL3 223 aa7.67□□□□□ -1.18
COL17A1-203ENST00000393211 C9orf139Q6ZV77 190 aa7.67□□□□□ -1.18
COL17A1-203ENST00000393211 GTSCR1Q86UQ5 136 aa7.67□□□□□ -1.18
COL17A1-203ENST00000393211 LINC00477Q96M19 166 aa7.67□□□□□ -1.18
COL17A1-203ENST00000393211 C20orf78Q9BR46 151 aa7.67□□□□□ -1.18
COL17A1-203ENST00000393211 EP300Q09472 2414 aaPredicted RBP7.66□□□□□ -1.18
COL17A1-203ENST00000393211 POLEQ07864 2286 aa7.66□□□□□ -1.18
COL17A1-203ENST00000393211 CNOT1A5YKK6 2376 aaKnown RBP7.66□□□□□ -1.18
COL17A1-203ENST00000393211 TRAV40A0A0B4J280 105 aa7.66□□□□□ -1.18
COL17A1-203ENST00000393211 FAM223BA6NKX1 122 aa7.66□□□□□ -1.18
COL17A1-203ENST00000393211 F8W1H4 67 aa7.66□□□□□ -1.18
COL17A1-203ENST00000393211 PPP1R17O96001 155 aa7.66□□□□□ -1.18
COL17A1-203ENST00000393211 TRGV3P03979 118 aa7.66□□□□□ -1.18
COL17A1-203ENST00000393211 GATA1P15976 413 aaPredicted RBP7.66□□□□□ -1.18
COL17A1-203ENST00000393211 ZFP36P26651 326 aaKnown RBP7.66□□□□□ -1.18
COL17A1-203ENST00000393211 PPIFP30405 207 aaKnown RBP7.66□□□□□ -1.18
COL17A1-203ENST00000393211 ECSCRQ19T08 205 aa7.66□□□□□ -1.18
COL17A1-203ENST00000393211 SPANXN1Q5VSR9 72 aa7.66□□□□□ -1.18
COL17A1-203ENST00000393211 CLEC19AQ6UXS0 136 aa7.66□□□□□ -1.18
COL17A1-203ENST00000393211 FAM223AQ8IWN6 122 aa7.66□□□□□ -1.18
COL17A1-203ENST00000393211 AJUBAQ96IF1 538 aa7.66□□□□□ -1.18
COL17A1-203ENST00000393211 SMIM2Q9BVW6 85 aa7.66□□□□□ -1.18
COL17A1-203ENST00000393211 TMEM160Q9NX00 188 aa7.66□□□□□ -1.18
COL17A1-203ENST00000393211 MRPL35Q9NZE8 188 aaKnown RBP7.66□□□□□ -1.18
COL17A1-203ENST00000393211 TRBV7-9A0A0J9YWB2 115 aa7.65□□□□□ -1.18
COL17A1-203ENST00000393211 LINC01549A6NIU2 74 aa7.65□□□□□ -1.18
COL17A1-203ENST00000393211 F8VRH5 84 aa7.65□□□□□ -1.18
COL17A1-203ENST00000393211 M0R381 172 aa7.65□□□□□ -1.18
COL17A1-203ENST00000393211 CRIP2P52943 208 aaPredicted RBP7.65□□□□□ -1.18
COL17A1-203ENST00000393211 TCTAP57738 103 aa7.65□□□□□ -1.18
COL17A1-203ENST00000393211 ATP5G2Q06055 141 aa7.65□□□□□ -1.18
COL17A1-203ENST00000393211 PCNX1Q96RV3 2341 aa7.65□□□□□ -1.19
COL17A1-203ENST00000393211 IGHV3OR16-8A0A075B7F1 116 aa7.64□□□□□ -1.19
COL17A1-203ENST00000393211 IGHV3-35A0A0C4DH35 117 aa7.64□□□□□ -1.19
COL17A1-203ENST00000393211 A0A1B0GWB2 263 aa7.64□□□□□ -1.19
COL17A1-203ENST00000393211 IGLL5B9A064 214 aa7.64□□□□□ -1.19
COL17A1-203ENST00000393211 OVOL1O14753 267 aa7.64□□□□□ -1.19
COL17A1-203ENST00000393211 ADORA2A-AS1P86434 159 aa7.64□□□□□ -1.19
COL17A1-203ENST00000393211 FOXI2Q6ZQN5 318 aa7.64□□□□□ -1.19
COL17A1-203ENST00000393211 ITLN2Q8WWU7 325 aaPredicted RBP7.64□□□□□ -1.19
COL17A1-203ENST00000393211 TOMM6Q96B49 74 aa7.64□□□□□ -1.19
COL17A1-203ENST00000393211 NAA38Q9BRA0 125 aaKnown RBP7.64□□□□□ -1.19
COL17A1-203ENST00000393211 UFC1Q9Y3C8 167 aa7.64□□□□□ -1.19
COL17A1-203ENST00000393211 SPENQ96T58 3664 aaKnown RBP7.64□□□□□ -1.19
COL17A1-203ENST00000393211 CEP250Q9BV73 2442 aa7.64□□□□□ -1.19
COL17A1-203ENST00000393211 TRAV21A0A0B4J279 112 aa7.63□□□□□ -1.19
COL17A1-203ENST00000393211 J3QR89 54 aa7.63□□□□□ -1.19
COL17A1-203ENST00000393211 BRI3O95415 125 aa7.63□□□□□ -1.19
COL17A1-203ENST00000393211 GLMPQ8WWB7 406 aa7.63□□□□□ -1.19
COL17A1-203ENST00000393211 C16orf92Q96LL3 132 aa7.63□□□□□ -1.19
COL17A1-203ENST00000393211 NHP2Q9NX24 153 aaKnown RBP7.63□□□□□ -1.19
COL17A1-203ENST00000393211 APC2O95996 2303 aa7.63□□□□□ -1.19
COL17A1-203ENST00000393211 SCGB1A1P11684 91 aa7.63□□□□□ -1.19
COL17A1-203ENST00000393211 SAA4P35542 130 aa7.63□□□□□ -1.19
COL17A1-203ENST00000393211 SUMO2P61956 95 aaKnown RBP7.63□□□□□ -1.19
COL17A1-203ENST00000393211 KLRB1Q12918 225 aa7.63□□□□□ -1.19
COL17A1-203ENST00000393211 C12orf74Q32Q52 190 aa7.63□□□□□ -1.19
COL17A1-203ENST00000393211 TM4SF20Q53R12 229 aa7.63□□□□□ -1.19
COL17A1-203ENST00000393211 C19orf54Q5BKX5 351 aa7.63□□□□□ -1.19
COL17A1-203ENST00000393211 C5orf56Q8N8D9 126 aa7.63□□□□□ -1.19
COL17A1-203ENST00000393211 DPH3P1Q9H4G8 78 aa7.63□□□□□ -1.19
COL17A1-203ENST00000393211 TRBV7-3A0A075B6L6 115 aa7.62□□□□□ -1.19
COL17A1-203ENST00000393211 MYMXA0A1B0GTQ4 84 aa7.62□□□□□ -1.19
COL17A1-203ENST00000393211 OR11H12B2RN74 326 aa7.62□□□□□ -1.19
COL17A1-203ENST00000393211 H3BVH4 76 aa7.62□□□□□ -1.19
COL17A1-203ENST00000393211 NPFFO15130 113 aa7.62□□□□□ -1.19
COL17A1-203ENST00000393211 UCNP55089 124 aa7.62□□□□□ -1.19
COL17A1-203ENST00000393211 RPL32P62910 135 aaKnown RBP7.62□□□□□ -1.19
COL17A1-203ENST00000393211 APRG1Q8IVJ8 170 aa7.62□□□□□ -1.19
COL17A1-203ENST00000393211 MAPKAPK5-AS1Q8N8E1 139 aa7.62□□□□□ -1.19
COL17A1-203ENST00000393211 NEXN-AS1Q8NBZ9 246 aa7.62□□□□□ -1.19
COL17A1-203ENST00000393211 OR11H1Q8NG94 326 aa7.62□□□□□ -1.19
COL17A1-203ENST00000393211 OR10J6PQ8NGY7 276 aa7.62□□□□□ -1.19
COL17A1-203ENST00000393211 OR11H2Q8NH07 326 aa7.62□□□□□ -1.19
COL17A1-203ENST00000393211 ZNF479Q96JC4 524 aa7.62□□□□□ -1.19
COL17A1-203ENST00000393211 SCGB3A1Q96QR1 104 aa7.62□□□□□ -1.19
COL17A1-203ENST00000393211 HIST1H4GQ99525 98 aa7.62□□□□□ -1.19
COL17A1-203ENST00000393211 TTTY13Q9BZ97 58 aa7.62□□□□□ -1.19
COL17A1-203ENST00000393211 CHTOPQ9Y3Y2 248 aaKnown RBP7.62□□□□□ -1.19
COL17A1-203ENST00000393211 ZFHX2Q9C0A1 2572 aaPredicted RBP7.62□□□□□ -1.19
COL17A1-203ENST00000393211 ZFHX4Q86UP3 3567 aa7.61□□□□□ -1.19
COL17A1-203ENST00000393211 TRAV26-2A0A0B4J265 109 aa7.61□□□□□ -1.19
COL17A1-203ENST00000393211 IGHV3-66A0A0C4DH42 116 aa7.61□□□□□ -1.19
COL17A1-203ENST00000393211 TMEM238C9JI98 176 aa7.61□□□□□ -1.19
COL17A1-203ENST00000393211 G3V318 75 aa7.61□□□□□ -1.19
COL17A1-203ENST00000393211 H3BUA1 57 aa7.61□□□□□ -1.19
COL17A1-203ENST00000393211 NDUFA4O00483 81 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms