RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 STPG4Q8N801 248 aa10.56□□□□□ -0.72
CLIC4-201ENST00000374379 NAA38Q9BRA0 125 aaKnown RBP10.56□□□□□ -0.72
CLIC4-201ENST00000374379 FOXE3Q13461 319 aa10.56□□□□□ -0.72
CLIC4-201ENST00000374379 SCGB3A1Q96QR1 104 aa10.56□□□□□ -0.72
CLIC4-201ENST00000374379 AGPAT4-IT1Q9H0P7 198 aa10.56□□□□□ -0.72
CLIC4-201ENST00000374379 DEFB112Q30KQ8 113 aa10.55□□□□□ -0.72
CLIC4-201ENST00000374379 CT83Q5H943 113 aa10.55□□□□□ -0.72
CLIC4-201ENST00000374379 SMIM12Q96EX1 92 aa10.55□□□□□ -0.72
CLIC4-201ENST00000374379 GFRA4Q9GZZ7 299 aa10.55□□□□□ -0.72
CLIC4-201ENST00000374379 ANKRD17O75179 2603 aaKnown RBP10.55□□□□□ -0.72
CLIC4-201ENST00000374379 A0A087X0K7 114 aa10.55□□□□□ -0.72
CLIC4-201ENST00000374379 PLP1P60201 277 aa10.55□□□□□ -0.72
CLIC4-201ENST00000374379 LINC01356Q8N9X3 169 aa10.55□□□□□ -0.72
CLIC4-201ENST00000374379 DUX3Q96PT4 197 aa10.55□□□□□ -0.72
CLIC4-201ENST00000374379 PEF1Q9UBV8 284 aaKnown RBP10.55□□□□□ -0.72
CLIC4-201ENST00000374379 TRBV12-3P01733 135 aa10.55□□□□□ -0.72
CLIC4-201ENST00000374379 CRYGBP07316 175 aa10.55□□□□□ -0.72
CLIC4-201ENST00000374379 MRPL51Q4U2R6 128 aaKnown RBP10.55□□□□□ -0.72
CLIC4-201ENST00000374379 DAZ1Q9NQZ3 744 aaKnown RBP10.55□□□□□ -0.72
CLIC4-201ENST00000374379 YAE1D1Q9NRH1 226 aa10.55□□□□□ -0.72
CLIC4-201ENST00000374379 IGHV3-73A0A0B4J1V6 119 aa10.54□□□□□ -0.72
CLIC4-201ENST00000374379 TNFRSF13BO14836 293 aaPredicted RBP10.54□□□□□ -0.72
CLIC4-201ENST00000374379 GATA1P15976 413 aaPredicted RBP10.54□□□□□ -0.72
CLIC4-201ENST00000374379 FAM104BQ5XKR9 115 aa10.54□□□□□ -0.72
CLIC4-201ENST00000374379 A0A087WWL8 130 aa10.54□□□□□ -0.72
CLIC4-201ENST00000374379 FAM223BA6NKX1 122 aa10.54□□□□□ -0.72
CLIC4-201ENST00000374379 MPV17L2Q567V2 206 aa10.54□□□□□ -0.72
CLIC4-201ENST00000374379 FAM223AQ8IWN6 122 aa10.54□□□□□ -0.72
CLIC4-201ENST00000374379 NDUFS8O00217 210 aa10.54□□□□□ -0.72
CLIC4-201ENST00000374379 Q5PR19 223 aa10.54□□□□□ -0.72
CLIC4-201ENST00000374379 GDF5OSQ5U4N7 250 aa10.54□□□□□ -0.72
CLIC4-201ENST00000374379 TRAV12-2A0A075B6T6 113 aa10.54□□□□□ -0.72
CLIC4-201ENST00000374379 NPYP01303 97 aa10.54□□□□□ -0.72
CLIC4-201ENST00000374379 DNLZQ5SXM8 178 aa10.54□□□□□ -0.72
CLIC4-201ENST00000374379 PET117Q6UWS5 81 aa10.54□□□□□ -0.72
CLIC4-201ENST00000374379 USMG5Q96IX5 58 aa10.54□□□□□ -0.72
CLIC4-201ENST00000374379 ATMQ13315 3056 aa10.54□□□□□ -0.72
CLIC4-201ENST00000374379 LY6LH3BQJ8 138 aa10.53□□□□□ -0.72
CLIC4-201ENST00000374379 IGLL1P15814 213 aa10.53□□□□□ -0.72
CLIC4-201ENST00000374379 KIR2DL4Q99706 377 aa10.53□□□□□ -0.72
CLIC4-201ENST00000374379 OVOL1O14753 267 aa10.53□□□□□ -0.72
CLIC4-201ENST00000374379 C11orf71Q6IPW1 123 aa10.53□□□□□ -0.72
CLIC4-201ENST00000374379 SYT8Q8NBV8 401 aa10.53□□□□□ -0.72
CLIC4-201ENST00000374379 ODF3BA8MYP8 253 aa10.53□□□□□ -0.72
CLIC4-201ENST00000374379 BUB3O43684 328 aa10.53□□□□□ -0.72
CLIC4-201ENST00000374379 IGLC2P0DOY2 106 aa10.53□□□□□ -0.72
CLIC4-201ENST00000374379 C5orf56Q8N8D9 126 aa10.53□□□□□ -0.72
CLIC4-201ENST00000374379 TMEM158Q8WZ71 300 aa10.53□□□□□ -0.72
CLIC4-201ENST00000374379 A6NDN8 102 aa10.52□□□□□ -0.72
CLIC4-201ENST00000374379 C10orf105Q8TEF2 133 aa10.52□□□□□ -0.72
CLIC4-201ENST00000374379 Q96MF0 132 aa10.52□□□□□ -0.72
CLIC4-201ENST00000374379 WIPF2Q8TF74 440 aaPredicted RBP10.52□□□□□ -0.73
CLIC4-201ENST00000374379 ZZEF1O43149 2961 aa10.52□□□□□ -0.73
CLIC4-201ENST00000374379 FAM231BA6NCW3 169 aa10.52□□□□□ -0.73
CLIC4-201ENST00000374379 TNFRSF6BO95407 300 aa10.52□□□□□ -0.73
CLIC4-201ENST00000374379 RPL24P83731 157 aaKnown RBP10.52□□□□□ -0.73
CLIC4-201ENST00000374379 DEFB136Q30KP8 78 aa10.52□□□□□ -0.73
CLIC4-201ENST00000374379 TMEM170BQ5T4T1 132 aa10.52□□□□□ -0.73
CLIC4-201ENST00000374379 Q71RC1 249 aaPredicted RBP10.52□□□□□ -0.73
CLIC4-201ENST00000374379 GTSCR1Q86UQ5 136 aa10.52□□□□□ -0.73
CLIC4-201ENST00000374379 SIGLEC8Q9NYZ4 499 aa10.52□□□□□ -0.73
CLIC4-201ENST00000374379 KLF12Q9Y4X4 402 aa10.52□□□□□ -0.73
CLIC4-201ENST00000374379 PPBPP02775 128 aa10.52□□□□□ -0.73
CLIC4-201ENST00000374379 Q1RN00 199 aa10.52□□□□□ -0.73
CLIC4-201ENST00000374379 UNQ9165/PRO28630Q6UXU0 137 aa10.52□□□□□ -0.73
CLIC4-201ENST00000374379 HIST1H4GQ99525 98 aa10.52□□□□□ -0.73
CLIC4-201ENST00000374379 NXT2Q9NPJ8 142 aaKnown RBP10.52□□□□□ -0.73
CLIC4-201ENST00000374379 WI2-2373I1.2A0A1W2PRP0 233 aa10.51□□□□□ -0.73
CLIC4-201ENST00000374379 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.51□□□□□ -0.73
CLIC4-201ENST00000374379 EMP1P54849 157 aa10.51□□□□□ -0.73
CLIC4-201ENST00000374379 NUTF2P61970 127 aaKnown RBP10.51□□□□□ -0.73
CLIC4-201ENST00000374379 SPINK13Q1W4C9 94 aa10.51□□□□□ -0.73
CLIC4-201ENST00000374379 JMJD8Q96S16 334 aa10.51□□□□□ -0.73
CLIC4-201ENST00000374379 OR1N2Q8NGR9 330 aa10.51□□□□□ -0.73
CLIC4-201ENST00000374379 IGLC3P0DOY3 106 aa10.51□□□□□ -0.73
CLIC4-201ENST00000374379 SLC25A16P16260 332 aa10.51□□□□□ -0.73
CLIC4-201ENST00000374379 DSCR9P59020 149 aa10.51□□□□□ -0.73
CLIC4-201ENST00000374379 Q6ZVH6 145 aa10.51□□□□□ -0.73
CLIC4-201ENST00000374379 ARL6IP6Q8N6S5 226 aa10.51□□□□□ -0.73
CLIC4-201ENST00000374379 LINC00477Q96M19 166 aa10.51□□□□□ -0.73
CLIC4-201ENST00000374379 NEGR1Q7Z3B1 354 aa10.5□□□□□ -0.73
CLIC4-201ENST00000374379 RAX2Q96IS3 184 aa10.5□□□□□ -0.73
CLIC4-201ENST00000374379 LINC01587Q99440 93 aa10.5□□□□□ -0.73
CLIC4-201ENST00000374379 C20orf144Q9BQM9 153 aa10.5□□□□□ -0.73
CLIC4-201ENST00000374379 PRORYQ9H606 182 aa10.5□□□□□ -0.73
CLIC4-201ENST00000374379 KLK9Q9UKQ9 250 aa10.5□□□□□ -0.73
CLIC4-201ENST00000374379 TP53TG3Q9ULZ0 132 aa10.5□□□□□ -0.73
CLIC4-201ENST00000374379 SCGB1C2P0DMR2 95 aa10.5□□□□□ -0.73
CLIC4-201ENST00000374379 SFTA2Q6UW10 78 aa10.5□□□□□ -0.73
CLIC4-201ENST00000374379 H7C2G1 150 aa10.49□□□□□ -0.73
CLIC4-201ENST00000374379 ANXA2RQ3ZCQ2 193 aa10.49□□□□□ -0.73
CLIC4-201ENST00000374379 GAGE10A6NGK3 116 aa10.49□□□□□ -0.73
CLIC4-201ENST00000374379 OR11H12B2RN74 326 aa10.49□□□□□ -0.73
CLIC4-201ENST00000374379 ATP5LO75964 103 aa10.49□□□□□ -0.73
CLIC4-201ENST00000374379 OR11H1Q8NG94 326 aa10.49□□□□□ -0.73
CLIC4-201ENST00000374379 OR11H2Q8NH07 326 aa10.49□□□□□ -0.73
CLIC4-201ENST00000374379 HOXA3O43365 443 aaPredicted RBP10.49□□□□□ -0.73
CLIC4-201ENST00000374379 KLHL30-AS1Q8NEE0 82 aa10.49□□□□□ -0.73
CLIC4-201ENST00000374379 ZNF80P51504 273 aaPredicted RBP10.49□□□□□ -0.73
CLIC4-201ENST00000374379 HERVK_113P61574 105 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms