RNA–Protein interactions for RNA: ENST00000356937.7

CDK11A-202, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-202ENST00000356937 TMEM61Q8N0U2 210 aa13.5□□□□□ -0.25
CDK11A-202ENST00000356937 Q8TAT8 98 aa13.5□□□□□ -0.25
CDK11A-202ENST00000356937 CBY1Q9Y3M2 126 aa13.5□□□□□ -0.25
CDK11A-202ENST00000356937 M0R143 59 aa13.5□□□□□ -0.25
CDK11A-202ENST00000356937 ZNF688P0C7X2 276 aa13.5□□□□□ -0.25
CDK11A-202ENST00000356937 MRPL52Q86TS9 123 aaKnown RBP13.5□□□□□ -0.25
CDK11A-202ENST00000356937 SNHG12Q9BXW3 62 aa13.5□□□□□ -0.25
CDK11A-202ENST00000356937 K7EQG2 157 aa13.49□□□□□ -0.25
CDK11A-202ENST00000356937 ERVFC1-1P60608 527 aa13.49□□□□□ -0.25
CDK11A-202ENST00000356937 CD300EQ496F6 205 aaPredicted RBP13.49□□□□□ -0.25
CDK11A-202ENST00000356937 SAMD13Q5VXD3 122 aa13.49□□□□□ -0.25
CDK11A-202ENST00000356937 MLST8Q9BVC4 326 aa13.49□□□□□ -0.25
CDK11A-202ENST00000356937 RNASE7Q9H1E1 156 aaKnown RBP13.49□□□□□ -0.25
CDK11A-202ENST00000356937 TRBV6-1A0A0K0K1D8 114 aa13.48□□□□□ -0.25
CDK11A-202ENST00000356937 ZNF705GA8MUZ8 300 aaPredicted RBP13.48□□□□□ -0.25
CDK11A-202ENST00000356937 IQCJQ1A5X6 159 aa13.48□□□□□ -0.25
CDK11A-202ENST00000356937 ZFP30Q9Y2G7 519 aa13.48□□□□□ -0.25
CDK11A-202ENST00000356937 FBN1P35555 2871 aaKnown RBP13.48□□□□□ -0.25
CDK11A-202ENST00000356937 XKRY2A2RUG3 117 aa13.48□□□□□ -0.25
CDK11A-202ENST00000356937 RBAKDNA6NC62 111 aa13.48□□□□□ -0.25
CDK11A-202ENST00000356937 H7BYZ3 331 aa13.48□□□□□ -0.25
CDK11A-202ENST00000356937 SAP30O75446 220 aa13.48□□□□□ -0.25
CDK11A-202ENST00000356937 PFN1P07737 140 aaKnown RBP13.48□□□□□ -0.25
CDK11A-202ENST00000356937 PSMG4Q5JS54 123 aa13.48□□□□□ -0.25
CDK11A-202ENST00000356937 TMEM18Q96B42 140 aa13.48□□□□□ -0.25
CDK11A-202ENST00000356937 C8orf49Q96NF6 230 aa13.48□□□□□ -0.25
CDK11A-202ENST00000356937 F6UB75 175 aa13.47□□□□□ -0.25
CDK11A-202ENST00000356937 SNRPD3P62318 126 aaKnown RBP13.47□□□□□ -0.25
CDK11A-202ENST00000356937 GAGE1Q13065 139 aa13.47□□□□□ -0.25
CDK11A-202ENST00000356937 OR10G8Q8NGN5 311 aa13.47□□□□□ -0.25
CDK11A-202ENST00000356937 ANAPC16Q96DE5 110 aa13.47□□□□□ -0.25
CDK11A-202ENST00000356937 SMIM12Q96EX1 92 aa13.47□□□□□ -0.25
CDK11A-202ENST00000356937 AGPAT4-IT1Q9H0P7 198 aa13.47□□□□□ -0.25
CDK11A-202ENST00000356937 FAM3BP58499 235 aaPredicted RBP13.46□□□□□ -0.25
CDK11A-202ENST00000356937 TMEM78Q5T7P6 136 aa13.46□□□□□ -0.25
CDK11A-202ENST00000356937 OR10J6PQ8NGY7 276 aa13.46□□□□□ -0.25
CDK11A-202ENST00000356937 SIGLEC8Q9NYZ4 499 aa13.46□□□□□ -0.25
CDK11A-202ENST00000356937 IZUMO1RA6ND01 250 aa13.46□□□□□ -0.26
CDK11A-202ENST00000356937 IBA57Q5T440 356 aaKnown RBP13.46□□□□□ -0.26
CDK11A-202ENST00000356937 ZC2HC1AQ96GY0 325 aa13.46□□□□□ -0.26
CDK11A-202ENST00000356937 PRR25Q96S07 402 aa13.46□□□□□ -0.26
CDK11A-202ENST00000356937 VWFP04275 2813 aa13.45□□□□□ -0.26
CDK11A-202ENST00000356937 FBLL1A6NHQ2 334 aaKnown RBP13.45□□□□□ -0.26
CDK11A-202ENST00000356937 G0S2P27469 103 aa13.45□□□□□ -0.26
CDK11A-202ENST00000356937 HIST1H1AQ02539 215 aaPredicted RBP13.45□□□□□ -0.26
CDK11A-202ENST00000356937 LINC00322Q6ZN03 302 aaPredicted RBP13.45□□□□□ -0.26
CDK11A-202ENST00000356937 LINC00482Q8N8I6 264 aa13.45□□□□□ -0.26
CDK11A-202ENST00000356937 SAPCD1Q5SSQ6 148 aa13.44□□□□□ -0.26
CDK11A-202ENST00000356937 C9orf47Q6ZRZ4 202 aa13.44□□□□□ -0.26
CDK11A-202ENST00000356937 OR8A1Q8NGG7 326 aa13.44□□□□□ -0.26
CDK11A-202ENST00000356937 KIR2DL5BA0A0G2JN68 375 aa13.44□□□□□ -0.26
CDK11A-202ENST00000356937 KIR2DL5BA0A0G2JPC4 375 aa13.44□□□□□ -0.26
CDK11A-202ENST00000356937 ZNF25P17030 456 aaPredicted RBP13.44□□□□□ -0.26
CDK11A-202ENST00000356937 KIR2DL5AQ8N109 375 aa13.44□□□□□ -0.26
CDK11A-202ENST00000356937 NDFIP1Q9BT67 221 aa13.44□□□□□ -0.26
CDK11A-202ENST00000356937 CD33P20138 364 aa13.43□□□□□ -0.26
CDK11A-202ENST00000356937 ZNF138P52744 262 aa13.43□□□□□ -0.26
CDK11A-202ENST00000356937 NUDT10Q8NFP7 164 aa13.43□□□□□ -0.26
CDK11A-202ENST00000356937 NUDT11Q96G61 164 aa13.43□□□□□ -0.26
CDK11A-202ENST00000356937 OSTCQ9NRP0 149 aa13.43□□□□□ -0.26
CDK11A-202ENST00000356937 DLEU1O43261 78 aa13.43□□□□□ -0.26
CDK11A-202ENST00000356937 LINC00614P0C842 121 aa13.43□□□□□ -0.26
CDK11A-202ENST00000356937 ZNF492Q9P255 531 aa13.43□□□□□ -0.26
CDK11A-202ENST00000356937 GOLT1BQ9Y3E0 138 aa13.43□□□□□ -0.26
CDK11A-202ENST00000356937 AGRNO00468 2067 aa13.43□□□□□ -0.26
CDK11A-202ENST00000356937 ACTL10Q5JWF8 245 aa13.42□□□□□ -0.26
CDK11A-202ENST00000356937 GDF5OSQ5U4N7 250 aa13.42□□□□□ -0.26
CDK11A-202ENST00000356937 DAZAP1Q96EP5 407 aaKnown RBP13.42□□□□□ -0.26
CDK11A-202ENST00000356937 V9GYV3 84 aa13.42□□□□□ -0.26
CDK11A-202ENST00000356937 NOTCH3Q9UM47 2321 aa13.42□□□□□ -0.26
CDK11A-202ENST00000356937 TRAV25A0A0B4J276 109 aa13.42□□□□□ -0.26
CDK11A-202ENST00000356937 TYMSP04818 313 aa13.42□□□□□ -0.26
CDK11A-202ENST00000356937 CT45A10P0DMU9 189 aa13.42□□□□□ -0.26
CDK11A-202ENST00000356937 LINC00477Q96M19 166 aa13.42□□□□□ -0.26
CDK11A-202ENST00000356937 SPAG8Q99932 426 aaPredicted RBP13.42□□□□□ -0.26
CDK11A-202ENST00000356937 TRAV2A0A0B4J234 112 aa13.41□□□□□ -0.26
CDK11A-202ENST00000356937 NPIPB6E9PJ23 425 aa13.41□□□□□ -0.26
CDK11A-202ENST00000356937 FAM231DQ6ZW35 169 aa13.41□□□□□ -0.26
CDK11A-202ENST00000356937 TMEM208Q9BTX3 173 aa13.41□□□□□ -0.26
CDK11A-202ENST00000356937 OR4C46A6NHA9 309 aa13.41□□□□□ -0.26
CDK11A-202ENST00000356937 CA1P00915 261 aaPredicted RBP13.41□□□□□ -0.26
CDK11A-202ENST00000356937 CRIP1P50238 77 aa13.41□□□□□ -0.26
CDK11A-202ENST00000356937 DEFB131AP59861 70 aa13.41□□□□□ -0.26
CDK11A-202ENST00000356937 STAB1Q9NY15 2570 aa13.4□□□□□ -0.26
CDK11A-202ENST00000356937 C19orf71A6NCJ1 209 aa13.4□□□□□ -0.26
CDK11A-202ENST00000356937 P01737 135 aa13.4□□□□□ -0.26
CDK11A-202ENST00000356937 C3orf56Q8N813 242 aa13.4□□□□□ -0.26
CDK11A-202ENST00000356937 SPATA3Q8NHX4 192 aa13.4□□□□□ -0.26
CDK11A-202ENST00000356937 ZNF256Q9Y2P7 627 aaPredicted RBP13.4□□□□□ -0.26
CDK11A-202ENST00000356937 A6NJY4 79 aa13.39□□□□□ -0.27
CDK11A-202ENST00000356937 J3KRW8 73 aa13.39□□□□□ -0.27
CDK11A-202ENST00000356937 IGLV1-51P01701 117 aa13.39□□□□□ -0.27
CDK11A-202ENST00000356937 EBLN2Q6P2I7 272 aa13.39□□□□□ -0.27
CDK11A-202ENST00000356937 ZNF80P51504 273 aaPredicted RBP13.39□□□□□ -0.27
CDK11A-202ENST00000356937 IMMP2LQ96T52 175 aa13.39□□□□□ -0.27
CDK11A-202ENST00000356937 A0A0J9YX75 114 aa13.38□□□□□ -0.27
CDK11A-202ENST00000356937 IGKV3-20P01619 116 aa13.38□□□□□ -0.27
CDK11A-202ENST00000356937 ZNF747Q9BV97 191 aa13.38□□□□□ -0.27
CDK11A-202ENST00000356937 FAM162BQ5T6X4 162 aa13.38□□□□□ -0.27
CDK11A-202ENST00000356937 COX8CQ7Z4L0 72 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms