RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 NPBQ8NG41 125 aa10.21□□□□□ -0.77
VSTM4-202ENST00000332853 OR9G4Q8NGQ1 327 aa10.21□□□□□ -0.77
VSTM4-202ENST00000332853 RPL36ALQ969Q0 106 aaKnown RBP10.21□□□□□ -0.77
VSTM4-202ENST00000332853 FAM231BA6NCW3 169 aa10.21□□□□□ -0.77
VSTM4-202ENST00000332853 TEX43Q6ZNM6 134 aa10.21□□□□□ -0.78
VSTM4-202ENST00000332853 J3QKU1 62 aa10.21□□□□□ -0.78
VSTM4-202ENST00000332853 J3QLI3 93 aa10.21□□□□□ -0.78
VSTM4-202ENST00000332853 NDUFS6O75380 124 aaKnown RBP10.21□□□□□ -0.78
VSTM4-202ENST00000332853 FOXE3Q13461 319 aa10.2□□□□□ -0.78
VSTM4-202ENST00000332853 MRPL36Q9P0J6 103 aaKnown RBP10.2□□□□□ -0.78
VSTM4-202ENST00000332853 C1orf159Q96HA4 380 aa10.2□□□□□ -0.78
VSTM4-202ENST00000332853 IGKV1OR2-108A0A075B7D4 117 aa10.2□□□□□ -0.78
VSTM4-202ENST00000332853 EREGO14944 169 aa10.2□□□□□ -0.78
VSTM4-202ENST00000332853 PLNP26678 52 aa10.2□□□□□ -0.78
VSTM4-202ENST00000332853 WDR87Q6ZQQ6 2873 aa10.2□□□□□ -0.78
VSTM4-202ENST00000332853 CMC4P56277 68 aaPredicted RBP10.2□□□□□ -0.78
VSTM4-202ENST00000332853 SAMD5Q5TGI4 173 aa10.2□□□□□ -0.78
VSTM4-202ENST00000332853 MRPS16Q9Y3D3 137 aaKnown RBP10.2□□□□□ -0.78
VSTM4-202ENST00000332853 C10orf142B7Z368 130 aa10.19□□□□□ -0.78
VSTM4-202ENST00000332853 NPYP01303 97 aa10.19□□□□□ -0.78
VSTM4-202ENST00000332853 EGR2P11161 476 aaPredicted RBP10.19□□□□□ -0.78
VSTM4-202ENST00000332853 TP53TG1Q9Y2A0 90 aa10.19□□□□□ -0.78
VSTM4-202ENST00000332853 C1orf229Q6ZS94 237 aaPredicted RBP10.19□□□□□ -0.78
VSTM4-202ENST00000332853 SPXQ9BT56 116 aa10.19□□□□□ -0.78
VSTM4-202ENST00000332853 SIGLEC8Q9NYZ4 499 aa10.19□□□□□ -0.78
VSTM4-202ENST00000332853 TRAV13-1A0A0B4J241 112 aa10.19□□□□□ -0.78
VSTM4-202ENST00000332853 CDPF1Q6NVV7 123 aa10.19□□□□□ -0.78
VSTM4-202ENST00000332853 DTX2Q86UW9 622 aa10.19□□□□□ -0.78
VSTM4-202ENST00000332853 CFHR4Q92496 578 aa10.19□□□□□ -0.78
VSTM4-202ENST00000332853 IGKV1-17P01599 117 aa10.19□□□□□ -0.78
VSTM4-202ENST00000332853 GP9P14770 177 aa10.19□□□□□ -0.78
VSTM4-202ENST00000332853 TEX22C9J3V5 150 aa10.18□□□□□ -0.78
VSTM4-202ENST00000332853 SCGB1A1P11684 91 aa10.18□□□□□ -0.78
VSTM4-202ENST00000332853 Q8N9W7 124 aa10.18□□□□□ -0.78
VSTM4-202ENST00000332853 C11orf1Q9H5F2 150 aa10.18□□□□□ -0.78
VSTM4-202ENST00000332853 ARFGEF3Q5TH69 2177 aa10.18□□□□□ -0.78
VSTM4-202ENST00000332853 GNRH2O43555 120 aa10.18□□□□□ -0.78
VSTM4-202ENST00000332853 ZNF479Q96JC4 524 aa10.18□□□□□ -0.78
VSTM4-202ENST00000332853 IGLV11-55A0A075B6I3 123 aa10.18□□□□□ -0.78
VSTM4-202ENST00000332853 IGHV1OR15-1A0A075B7D0 117 aa10.18□□□□□ -0.78
VSTM4-202ENST00000332853 IGHV3-38A0A0C4DH36 116 aa10.18□□□□□ -0.78
VSTM4-202ENST00000332853 CDKN1BP46527 198 aa10.18□□□□□ -0.78
VSTM4-202ENST00000332853 BRWD1-AS2P59051 145 aa10.18□□□□□ -0.78
VSTM4-202ENST00000332853 IGLV1-47P01700 117 aa10.17□□□□□ -0.78
VSTM4-202ENST00000332853 SEC11AP67812 179 aa10.17□□□□□ -0.78
VSTM4-202ENST00000332853 AGPAT4-IT1Q9H0P7 198 aa10.17□□□□□ -0.78
VSTM4-202ENST00000332853 MEGF9Q9H1U4 602 aa10.17□□□□□ -0.78
VSTM4-202ENST00000332853 LINC00158P58513 81 aa10.17□□□□□ -0.78
VSTM4-202ENST00000332853 OR5A1Q8NGJ0 315 aa10.17□□□□□ -0.78
VSTM4-202ENST00000332853 TRPT1Q86TN4 253 aaKnown RBP10.17□□□□□ -0.78
VSTM4-202ENST00000332853 Q8N8P6 123 aa10.17□□□□□ -0.78
VSTM4-202ENST00000332853 VPREB3Q9UKI3 123 aa10.17□□□□□ -0.78
VSTM4-202ENST00000332853 PROP1O75360 226 aa10.16□□□□□ -0.78
VSTM4-202ENST00000332853 PAX2Q02962 417 aa10.16□□□□□ -0.78
VSTM4-202ENST00000332853 MAJINQ3KP22 176 aa10.16□□□□□ -0.78
VSTM4-202ENST00000332853 LINC01559Q495D7 138 aa10.16□□□□□ -0.78
VSTM4-202ENST00000332853 C10orf105Q8TEF2 133 aa10.16□□□□□ -0.78
VSTM4-202ENST00000332853 CTSGP08311 255 aa10.16□□□□□ -0.78
VSTM4-202ENST00000332853 GAGE12JA6NER3 117 aa10.16□□□□□ -0.78
VSTM4-202ENST00000332853 CRPP02741 224 aa10.16□□□□□ -0.78
VSTM4-202ENST00000332853 GAGE1Q13065 139 aa10.16□□□□□ -0.78
VSTM4-202ENST00000332853 GAGE4Q13068 117 aa10.16□□□□□ -0.78
VSTM4-202ENST00000332853 GAGE5Q13069 117 aa10.16□□□□□ -0.78
VSTM4-202ENST00000332853 GAGE13Q4V321 117 aa10.16□□□□□ -0.78
VSTM4-202ENST00000332853 C2orf66Q6UXQ4 117 aa10.16□□□□□ -0.78
VSTM4-202ENST00000332853 DEFB113Q30KQ7 82 aa10.16□□□□□ -0.78
VSTM4-202ENST00000332853 DEFB121Q5J5C9 76 aa10.16□□□□□ -0.78
VSTM4-202ENST00000332853 FAM167A-AS1Q96KT0 104 aa10.16□□□□□ -0.78
VSTM4-202ENST00000332853 RNF114Q9Y508 228 aa10.16□□□□□ -0.78
VSTM4-202ENST00000332853 HOXD3P31249 432 aaPredicted RBP10.15□□□□□ -0.78
VSTM4-202ENST00000332853 C5orf56Q8N8D9 126 aa10.15□□□□□ -0.78
VSTM4-202ENST00000332853 DOPEY2Q9Y3R5 2298 aa10.15□□□□□ -0.78
VSTM4-202ENST00000332853 A0A087WX48 190 aa10.15□□□□□ -0.78
VSTM4-202ENST00000332853 C19orf84I3L1E1 186 aa10.15□□□□□ -0.78
VSTM4-202ENST00000332853 SLURP1P55000 103 aa10.15□□□□□ -0.78
VSTM4-202ENST00000332853 C1QTNF4Q9BXJ3 329 aa10.15□□□□□ -0.78
VSTM4-202ENST00000332853 PLCE1Q9P212 2302 aa10.15□□□□□ -0.78
VSTM4-202ENST00000332853 AZU1P20160 251 aa10.15□□□□□ -0.79
VSTM4-202ENST00000332853 KIR3DS1Q14943 382 aa10.15□□□□□ -0.79
VSTM4-202ENST00000332853 CHAC1Q9BUX1 264 aa10.15□□□□□ -0.79
VSTM4-202ENST00000332853 ESDP10768 282 aa10.14□□□□□ -0.79
VSTM4-202ENST00000332853 IGF2BP2-AS1Q96M15 143 aa10.14□□□□□ -0.79
VSTM4-202ENST00000332853 AJUBAQ96IF1 538 aa10.14□□□□□ -0.79
VSTM4-202ENST00000332853 RBMY1BA6NDE4 496 aaKnown RBP10.14□□□□□ -0.79
VSTM4-202ENST00000332853 RBMY1EA6NEQ0 496 aaKnown RBP10.14□□□□□ -0.79
VSTM4-202ENST00000332853 SDHAF1A6NFY7 115 aa10.14□□□□□ -0.79
VSTM4-202ENST00000332853 LINC01549A6NIU2 74 aa10.14□□□□□ -0.79
VSTM4-202ENST00000332853 RBMY1DP0C7P1 496 aaKnown RBP10.14□□□□□ -0.79
VSTM4-202ENST00000332853 RBMY1A1P0DJD3 496 aaKnown RBP10.14□□□□□ -0.79
VSTM4-202ENST00000332853 RBMY1CP0DJD4 496 aa10.14□□□□□ -0.79
VSTM4-202ENST00000332853 PCP4P48539 62 aa10.14□□□□□ -0.79
VSTM4-202ENST00000332853 GATA1P15976 413 aaPredicted RBP10.14□□□□□ -0.79
VSTM4-202ENST00000332853 GAGE12BA1L429 117 aa10.14□□□□□ -0.79
VSTM4-202ENST00000332853 GAGE7O76087 117 aa10.14□□□□□ -0.79
VSTM4-202ENST00000332853 GAGE12FP0CL80 117 aa10.14□□□□□ -0.79
VSTM4-202ENST00000332853 GAGE12GP0CL81 117 aa10.14□□□□□ -0.79
VSTM4-202ENST00000332853 GAGE12IP0CL82 117 aa10.14□□□□□ -0.79
VSTM4-202ENST00000332853 PCNTO95613 3336 aa10.13□□□□□ -0.79
VSTM4-202ENST00000332853 NUPR1O60356 82 aa10.13□□□□□ -0.79
VSTM4-202ENST00000332853 ELANEP08246 267 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms