RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 URB1-AS1Q96HZ7 61 aa11.13□□□□□ -0.63
SMG8-201ENST00000300917 RPLP1P05386 114 aaKnown RBP11.13□□□□□ -0.63
SMG8-201ENST00000300917 TMEM78Q5T7P6 136 aa11.13□□□□□ -0.63
SMG8-201ENST00000300917 M0QZK8 103 aa11.12□□□□□ -0.63
SMG8-201ENST00000300917 NCR2O95944 276 aa11.12□□□□□ -0.63
SMG8-201ENST00000300917 RHPN1-AS1Q9BWJ2 59 aa11.12□□□□□ -0.63
SMG8-201ENST00000300917 TRBV6-1A0A0K0K1D8 114 aa11.12□□□□□ -0.63
SMG8-201ENST00000300917 FAM181BA6NEQ2 426 aa11.12□□□□□ -0.63
SMG8-201ENST00000300917 ESDP10768 282 aa11.12□□□□□ -0.63
SMG8-201ENST00000300917 HAX1O00165 279 aa11.11□□□□□ -0.63
SMG8-201ENST00000300917 SLC50A1Q9BRV3 221 aa11.11□□□□□ -0.63
SMG8-201ENST00000300917 FASNP49327 2511 aaKnown RBP11.11□□□□□ -0.63
SMG8-201ENST00000300917 NOTCH3Q9UM47 2321 aa11.11□□□□□ -0.63
SMG8-201ENST00000300917 GATA3P23771 443 aa11.11□□□□□ -0.63
SMG8-201ENST00000300917 KIR3DS1Q14943 382 aa11.11□□□□□ -0.63
SMG8-201ENST00000300917 FER1L6-AS1Q8NA97 138 aa11.11□□□□□ -0.63
SMG8-201ENST00000300917 C11orf21Q9P2W6 132 aa11.11□□□□□ -0.63
SMG8-201ENST00000300917 WFDC11Q8NEX6 87 aa11.11□□□□□ -0.63
SMG8-201ENST00000300917 HIST1H1AQ02539 215 aaPredicted RBP11.1□□□□□ -0.63
SMG8-201ENST00000300917 USMG5Q96IX5 58 aa11.1□□□□□ -0.63
SMG8-201ENST00000300917 FABP5P3A8MUU1 101 aa11.1□□□□□ -0.63
SMG8-201ENST00000300917 D6R8Y8 96 aa11.1□□□□□ -0.63
SMG8-201ENST00000300917 GPHB5Q86YW7 130 aa11.1□□□□□ -0.63
SMG8-201ENST00000300917 A0A087X0K7 114 aa11.1□□□□□ -0.63
SMG8-201ENST00000300917 FAM231BA6NCW3 169 aa11.1□□□□□ -0.63
SMG8-201ENST00000300917 NDUFA4O00483 81 aa11.1□□□□□ -0.63
SMG8-201ENST00000300917 BMI1P35226 326 aa11.1□□□□□ -0.63
SMG8-201ENST00000300917 CRIP2P52943 208 aaPredicted RBP11.1□□□□□ -0.63
SMG8-201ENST00000300917 FAM106AQ4KMX7 169 aa11.1□□□□□ -0.63
SMG8-201ENST00000300917 C1orf194Q5T5A4 169 aa11.1□□□□□ -0.63
SMG8-201ENST00000300917 EBLN2Q6P2I7 272 aa11.1□□□□□ -0.63
SMG8-201ENST00000300917 C2orf88Q9BSF0 95 aa11.1□□□□□ -0.63
SMG8-201ENST00000300917 VAMP8Q9BV40 100 aa11.1□□□□□ -0.63
SMG8-201ENST00000300917 U3KQE9 123 aa11.1□□□□□ -0.63
SMG8-201ENST00000300917 IGKV3-20P01619 116 aa11.09□□□□□ -0.63
SMG8-201ENST00000300917 IGLV1-40P01703 118 aa11.09□□□□□ -0.63
SMG8-201ENST00000300917 DEFB136Q30KP8 78 aa11.09□□□□□ -0.63
SMG8-201ENST00000300917 KHDC1LQ5JSQ8 128 aa11.09□□□□□ -0.63
SMG8-201ENST00000300917 PRR9Q5T870 116 aa11.09□□□□□ -0.63
SMG8-201ENST00000300917 ZNF705AQ6ZN79 300 aaPredicted RBP11.09□□□□□ -0.63
SMG8-201ENST00000300917 PMCHL2Q9BQD1 86 aa11.09□□□□□ -0.63
SMG8-201ENST00000300917 KLK9Q2XQG4 91 aa11.09□□□□□ -0.63
SMG8-201ENST00000300917 DUX3Q96PT4 197 aa11.09□□□□□ -0.63
SMG8-201ENST00000300917 PEF1Q9UBV8 284 aaKnown RBP11.09□□□□□ -0.63
SMG8-201ENST00000300917 KLK9Q9UKQ9 250 aa11.09□□□□□ -0.63
SMG8-201ENST00000300917 A0A0G2JLM5 398 aa11.08□□□□□ -0.64
SMG8-201ENST00000300917 GAS8-AS1O95177 125 aa11.08□□□□□ -0.64
SMG8-201ENST00000300917 CR1P17927 2039 aa11.08□□□□□ -0.64
SMG8-201ENST00000300917 CIDEAO60543 219 aa11.08□□□□□ -0.64
SMG8-201ENST00000300917 LINC00614P0C842 121 aa11.08□□□□□ -0.64
SMG8-201ENST00000300917 LOXL1Q08397 574 aaPredicted RBP11.08□□□□□ -0.64
SMG8-201ENST00000300917 KLF5Q13887 457 aaPredicted RBP11.08□□□□□ -0.64
SMG8-201ENST00000300917 C11orf44Q8N8P7 122 aa11.08□□□□□ -0.64
SMG8-201ENST00000300917 PRSS3P2Q8NHM4 247 aa11.08□□□□□ -0.64
SMG8-201ENST00000300917 TMEM190Q8WZ59 177 aa11.08□□□□□ -0.64
SMG8-201ENST00000300917 IGKV3D-20A0A0C4DH25 116 aa11.07□□□□□ -0.64
SMG8-201ENST00000300917 IGHV1-24A0A0C4DH33 117 aa11.07□□□□□ -0.64
SMG8-201ENST00000300917 SYNJ2BPP57105 145 aa11.07□□□□□ -0.64
SMG8-201ENST00000300917 C18orf65Q6ZTR6 163 aa11.07□□□□□ -0.64
SMG8-201ENST00000300917 SPATA12Q7Z6I5 190 aa11.07□□□□□ -0.64
SMG8-201ENST00000300917 ZNF575Q86XF7 245 aa11.07□□□□□ -0.64
SMG8-201ENST00000300917 Q8N976 141 aa11.07□□□□□ -0.64
SMG8-201ENST00000300917 VPREB3Q9UKI3 123 aa11.07□□□□□ -0.64
SMG8-201ENST00000300917 CHTOPQ9Y3Y2 248 aaKnown RBP11.07□□□□□ -0.64
SMG8-201ENST00000300917 IFI27P40305 119 aaPredicted RBP11.06□□□□□ -0.64
SMG8-201ENST00000300917 DAZ1Q9NQZ3 744 aaKnown RBP11.06□□□□□ -0.64
SMG8-201ENST00000300917 GATA1P15976 413 aaPredicted RBP11.06□□□□□ -0.64
SMG8-201ENST00000300917 EVI2AP22794 236 aa11.06□□□□□ -0.64
SMG8-201ENST00000300917 OR10AG1Q8NH19 301 aa11.06□□□□□ -0.64
SMG8-201ENST00000300917 IGHV7-4-1A0A0J9YVY3 117 aa11.06□□□□□ -0.64
SMG8-201ENST00000300917 PSMB8P28062 276 aa11.06□□□□□ -0.64
SMG8-201ENST00000300917 CFHR3Q02985 330 aa11.06□□□□□ -0.64
SMG8-201ENST00000300917 UFC1Q9Y3C8 167 aa11.06□□□□□ -0.64
SMG8-201ENST00000300917 UNC79Q9P2D8 2635 aa11.05□□□□□ -0.64
SMG8-201ENST00000300917 AGRNO00468 2067 aa11.05□□□□□ -0.64
SMG8-201ENST00000300917 EREGO14944 169 aa11.05□□□□□ -0.64
SMG8-201ENST00000300917 MRPL51Q4U2R6 128 aaKnown RBP11.05□□□□□ -0.64
SMG8-201ENST00000300917 LBHQ53QV2 105 aaPredicted RBP11.05□□□□□ -0.64
SMG8-201ENST00000300917 DNLZQ5SXM8 178 aa11.05□□□□□ -0.64
SMG8-201ENST00000300917 CKS2P33552 79 aa11.05□□□□□ -0.64
SMG8-201ENST00000300917 NUTF2P61970 127 aaKnown RBP11.05□□□□□ -0.64
SMG8-201ENST00000300917 PRELID3AQ96N28 172 aa11.05□□□□□ -0.64
SMG8-201ENST00000300917 NIPBLQ6KC79 2804 aaeCLIP11.05□□□□□ -0.64
SMG8-201ENST00000300917 H3BVH4 76 aa11.04□□□□□ -0.64
SMG8-201ENST00000300917 J3QLI3 93 aa11.04□□□□□ -0.64
SMG8-201ENST00000300917 ZNF688P0C7X2 276 aa11.04□□□□□ -0.64
SMG8-201ENST00000300917 RNASE4P34096 147 aaKnown RBP11.04□□□□□ -0.64
SMG8-201ENST00000300917 BATFQ16520 125 aa11.04□□□□□ -0.64
SMG8-201ENST00000300917 PRSS57Q6UWY2 283 aa11.04□□□□□ -0.64
SMG8-201ENST00000300917 C9orf139Q6ZV77 190 aa11.04□□□□□ -0.64
SMG8-201ENST00000300917 OR10J6PQ8NGY7 276 aa11.04□□□□□ -0.64
SMG8-201ENST00000300917 TP73-AS1Q9UF72 201 aa11.04□□□□□ -0.64
SMG8-201ENST00000300917 LEPROTL1O95214 131 aa11.04□□□□□ -0.64
SMG8-201ENST00000300917 TCTAP57738 103 aa11.04□□□□□ -0.64
SMG8-201ENST00000300917 SPATA45Q537H7 98 aa11.04□□□□□ -0.64
SMG8-201ENST00000300917 FAM104BQ5XKR9 115 aa11.04□□□□□ -0.64
SMG8-201ENST00000300917 TEX43Q6ZNM6 134 aa11.04□□□□□ -0.64
SMG8-201ENST00000300917 FA2HQ7L5A8 372 aa11.04□□□□□ -0.64
SMG8-201ENST00000300917 GCN1Q92616 2671 aaKnown RBP11.04□□□□□ -0.64
SMG8-201ENST00000300917 Q6AWC8 147 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms