RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 SSBP2P81877 361 aaPredicted RBP10.1□□□□□ -0.79
PTCD1-201ENST00000292478 FOXI2Q6ZQN5 318 aa10.1□□□□□ -0.79
PTCD1-201ENST00000292478 DEFB104AQ8WTQ1 72 aa10.1□□□□□ -0.79
PTCD1-201ENST00000292478 DKK4Q9UBT3 224 aa10.09□□□□□ -0.79
PTCD1-201ENST00000292478 FER1L5A0AVI2 2057 aa10.09□□□□□ -0.79
PTCD1-201ENST00000292478 EREGO14944 169 aa10.09□□□□□ -0.79
PTCD1-201ENST00000292478 SIVA1O15304 175 aa10.09□□□□□ -0.79
PTCD1-201ENST00000292478 GAGE12BA1L429 117 aa10.09□□□□□ -0.79
PTCD1-201ENST00000292478 K7EN84 100 aa10.09□□□□□ -0.79
PTCD1-201ENST00000292478 LURAP1LQ8IV03 231 aa10.09□□□□□ -0.79
PTCD1-201ENST00000292478 MYO7BQ6PIF6 2116 aa10.09□□□□□ -0.79
PTCD1-201ENST00000292478 GAGE12JA6NER3 117 aa10.09□□□□□ -0.79
PTCD1-201ENST00000292478 APOC4P55056 127 aa10.09□□□□□ -0.79
PTCD1-201ENST00000292478 GAGE1Q13065 139 aa10.09□□□□□ -0.79
PTCD1-201ENST00000292478 GAGE4Q13068 117 aa10.09□□□□□ -0.79
PTCD1-201ENST00000292478 GAGE5Q13069 117 aa10.09□□□□□ -0.79
PTCD1-201ENST00000292478 TMEM243Q9BU79 118 aa10.09□□□□□ -0.79
PTCD1-201ENST00000292478 SPRY4Q9C004 299 aa10.09□□□□□ -0.79
PTCD1-201ENST00000292478 NPYP01303 97 aa10.08□□□□□ -0.8
PTCD1-201ENST00000292478 WT1P19544 449 aaPredicted RBP10.08□□□□□ -0.8
PTCD1-201ENST00000292478 KNCNA6PVL3 124 aa10.08□□□□□ -0.8
PTCD1-201ENST00000292478 F8VRH5 84 aa10.08□□□□□ -0.8
PTCD1-201ENST00000292478 F8WEM9 126 aa10.08□□□□□ -0.8
PTCD1-201ENST00000292478 CENPVL3A0A0U1RRI6 287 aa10.08□□□□□ -0.8
PTCD1-201ENST00000292478 ZNF493Q6ZR52 646 aa10.08□□□□□ -0.8
PTCD1-201ENST00000292478 IGFBPL1Q8WX77 278 aa10.08□□□□□ -0.8
PTCD1-201ENST00000292478 LAMTOR3Q9UHA4 124 aa10.08□□□□□ -0.8
PTCD1-201ENST00000292478 KLF12Q9Y4X4 402 aa10.08□□□□□ -0.8
PTCD1-201ENST00000292478 C9orf118A6NHY6 69 aa10.08□□□□□ -0.8
PTCD1-201ENST00000292478 INS-IGF2F8WCM5 200 aa10.08□□□□□ -0.8
PTCD1-201ENST00000292478 DAD1P61803 113 aa10.08□□□□□ -0.8
PTCD1-201ENST00000292478 DOCK8Q8NF50 2099 aa10.07□□□□□ -0.8
PTCD1-201ENST00000292478 VPREB3Q9UKI3 123 aa10.07□□□□□ -0.8
PTCD1-201ENST00000292478 ACACAQ13085 2346 aa10.07□□□□□ -0.8
PTCD1-201ENST00000292478 C3orf56Q8N813 242 aa10.07□□□□□ -0.8
PTCD1-201ENST00000292478 DENND4CQ5VZ89 1909 aa10.07□□□□□ -0.8
PTCD1-201ENST00000292478 I3L2K1 104 aa10.07□□□□□ -0.8
PTCD1-201ENST00000292478 YLPM1P49750 1951 aaKnown RBP10.06□□□□□ -0.8
PTCD1-201ENST00000292478 NCOR1O75376 2440 aa10.06□□□□□ -0.8
PTCD1-201ENST00000292478 RHOHQ15669 191 aa10.06□□□□□ -0.8
PTCD1-201ENST00000292478 ADAMTSL5Q6ZMM2 481 aa10.06□□□□□ -0.8
PTCD1-201ENST00000292478 SNHG12Q9BXW3 62 aa10.06□□□□□ -0.8
PTCD1-201ENST00000292478 J3QKU1 62 aa10.06□□□□□ -0.8
PTCD1-201ENST00000292478 IGLL1P15814 213 aa10.06□□□□□ -0.8
PTCD1-201ENST00000292478 ZNF407Q9C0G0 2248 aa10.06□□□□□ -0.8
PTCD1-201ENST00000292478 TRAV8-3A0A0A6YYJ7 113 aa10.06□□□□□ -0.8
PTCD1-201ENST00000292478 FOXE3Q13461 319 aa10.06□□□□□ -0.8
PTCD1-201ENST00000292478 ZNRF2Q8NHG8 242 aa10.06□□□□□ -0.8
PTCD1-201ENST00000292478 TRAV26-2A0A0B4J265 109 aa10.05□□□□□ -0.8
PTCD1-201ENST00000292478 COA6Q5JTJ3 125 aaKnown RBP10.05□□□□□ -0.8
PTCD1-201ENST00000292478 AGPAT4-IT1Q9H0P7 198 aa10.05□□□□□ -0.8
PTCD1-201ENST00000292478 MAPK1IP1LQ8NDC0 245 aa10.05□□□□□ -0.8
PTCD1-201ENST00000292478 IGLV11-55A0A075B6I3 123 aa10.05□□□□□ -0.8
PTCD1-201ENST00000292478 C9JAW5 83 aa10.05□□□□□ -0.8
PTCD1-201ENST00000292478 HERVK_113P63121 156 aa10.05□□□□□ -0.8
PTCD1-201ENST00000292478 DYNAPQ8N1N2 210 aa10.05□□□□□ -0.8
PTCD1-201ENST00000292478 TRAV12-2A0A075B6T6 113 aa10.05□□□□□ -0.8
PTCD1-201ENST00000292478 GP9P14770 177 aa10.05□□□□□ -0.8
PTCD1-201ENST00000292478 MRPL35Q9NZE8 188 aaKnown RBP10.05□□□□□ -0.8
PTCD1-201ENST00000292478 INAFM2P0DMQ5 153 aa10.04□□□□□ -0.8
PTCD1-201ENST00000292478 SPANXA1Q9NS26 97 aa10.04□□□□□ -0.8
PTCD1-201ENST00000292478 RPL32P62910 135 aaKnown RBP10.04□□□□□ -0.8
PTCD1-201ENST00000292478 TCF15Q12870 199 aa10.04□□□□□ -0.8
PTCD1-201ENST00000292478 SPRNQ5BIV9 151 aa10.04□□□□□ -0.8
PTCD1-201ENST00000292478 RNF152Q8N8N0 203 aa10.04□□□□□ -0.8
PTCD1-201ENST00000292478 NDUFS7O75251 213 aa10.04□□□□□ -0.8
PTCD1-201ENST00000292478 IGHV3-16A0A0C4DH30 117 aa10.04□□□□□ -0.8
PTCD1-201ENST00000292478 C17orf77Q96MU5 243 aa10.04□□□□□ -0.8
PTCD1-201ENST00000292478 IGHV7-81A0A0B4J1V7 117 aa10.03□□□□□ -0.8
PTCD1-201ENST00000292478 F5H768 121 aa10.03□□□□□ -0.8
PTCD1-201ENST00000292478 K7EIM0 57 aa10.03□□□□□ -0.8
PTCD1-201ENST00000292478 EGR2P11161 476 aaPredicted RBP10.03□□□□□ -0.8
PTCD1-201ENST00000292478 DEFB112Q30KQ8 113 aa10.03□□□□□ -0.8
PTCD1-201ENST00000292478 SPANXDQ9BXN6 97 aa10.03□□□□□ -0.8
PTCD1-201ENST00000292478 KLF2Q9Y5W3 355 aaPredicted RBP10.03□□□□□ -0.8
PTCD1-201ENST00000292478 GAGE7O76087 117 aa10.03□□□□□ -0.8
PTCD1-201ENST00000292478 GAGE12FP0CL80 117 aa10.03□□□□□ -0.8
PTCD1-201ENST00000292478 GAGE12GP0CL81 117 aa10.03□□□□□ -0.8
PTCD1-201ENST00000292478 GAGE12IP0CL82 117 aa10.03□□□□□ -0.8
PTCD1-201ENST00000292478 NDUFA12Q9UI09 145 aa10.03□□□□□ -0.8
PTCD1-201ENST00000292478 TSSC4Q9Y5U2 329 aaPredicted RBP10.03□□□□□ -0.8
PTCD1-201ENST00000292478 F8W1H4 67 aa10.03□□□□□ -0.8
PTCD1-201ENST00000292478 ZNF561-AS1K7EIQ3 104 aa10.02□□□□□ -0.8
PTCD1-201ENST00000292478 CEND1Q8N111 149 aa10.02□□□□□ -0.8
PTCD1-201ENST00000292478 ZNF747Q9BV97 191 aa10.02□□□□□ -0.81
PTCD1-201ENST00000292478 DAZAP2Q15038 168 aaPredicted RBP10.02□□□□□ -0.81
PTCD1-201ENST00000292478 VWC2LB2RUY7 222 aa10.02□□□□□ -0.81
PTCD1-201ENST00000292478 GRNP28799 593 aaKnown RBP10.01□□□□□ -0.81
PTCD1-201ENST00000292478 CFHR4Q92496 578 aa10.01□□□□□ -0.81
PTCD1-201ENST00000292478 OCIAD2Q56VL3 154 aa10.01□□□□□ -0.81
PTCD1-201ENST00000292478 BVES-AS1Q5T3Y7 98 aa10.01□□□□□ -0.81
PTCD1-201ENST00000292478 EDA2RQ9HAV5 297 aa10.01□□□□□ -0.81
PTCD1-201ENST00000292478 LTBP2Q14767 1821 aa10.01□□□□□ -0.81
PTCD1-201ENST00000292478 H3BMM0 161 aa10.01□□□□□ -0.81
PTCD1-201ENST00000292478 UBE2WQ96B02 151 aa10.01□□□□□ -0.81
PTCD1-201ENST00000292478 J3QQQ9 107 aa10.01□□□□□ -0.81
PTCD1-201ENST00000292478 K7EP34 96 aa10.01□□□□□ -0.81
PTCD1-201ENST00000292478 HOXD3P31249 432 aaPredicted RBP10.01□□□□□ -0.81
PTCD1-201ENST00000292478 IGKV1-17P01599 117 aa10.01□□□□□ -0.81
PTCD1-201ENST00000292478 CFHR3Q02985 330 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms