RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, human

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-215	ENST00000639487	CELSR3	Q9NYQ7	3312 aa		4.87	□□□□□ -1.63
RTTN-215	ENST00000639487	ANKRD17	O75179	2603 aa	Known RBP	4.87	□□□□□ -1.63
RTTN-215	ENST00000639487	FAM231B	A6NCW3	169 aa		4.87	□□□□□ -1.63
RTTN-215	ENST00000639487	PAGE4	O60829	102 aa		4.87	□□□□□ -1.63
RTTN-215	ENST00000639487	RPL12	P30050	165 aa	Known RBP	4.87	□□□□□ -1.63
RTTN-215	ENST00000639487	ERH	P84090	104 aa	Known RBP	4.87	□□□□□ -1.63
RTTN-215	ENST00000639487	CYB561D1	Q8N8Q1	229 aa		4.87	□□□□□ -1.63
RTTN-215	ENST00000639487	SGK494	Q96LW2	274 aa		4.87	□□□□□ -1.63
RTTN-215	ENST00000639487	CYSLTR1	Q9Y271	337 aa		4.87	□□□□□ -1.63
RTTN-215	ENST00000639487	NUPR1	O60356	82 aa		4.86	□□□□□ -1.63
RTTN-215	ENST00000639487	FCGR3B	O75015	233 aa		4.86	□□□□□ -1.63
RTTN-215	ENST00000639487	KRAS	P01116	189 aa		4.86	□□□□□ -1.63
RTTN-215	ENST00000639487	CT45A10	P0DMU9	189 aa		4.86	□□□□□ -1.63
RTTN-215	ENST00000639487	COL8A1	P27658	744 aa		4.86	□□□□□ -1.63
RTTN-215	ENST00000639487	SRP14	P37108	136 aa	Known RBP	4.86	□□□□□ -1.63
RTTN-215	ENST00000639487	CTRL	P40313	264 aa		4.86	□□□□□ -1.63
RTTN-215	ENST00000639487	IBA57	Q5T440	356 aa	Known RBP	4.86	□□□□□ -1.63
RTTN-215	ENST00000639487	ZNF695	Q8IW36	515 aa		4.86	□□□□□ -1.63
RTTN-215	ENST00000639487	TMEM75	Q8N9X5	138 aa		4.86	□□□□□ -1.63
RTTN-215	ENST00000639487	FAM213B	Q8TBF2	198 aa		4.86	□□□□□ -1.63
RTTN-215	ENST00000639487	APC2	O95996	2303 aa		4.86	□□□□□ -1.63
RTTN-215	ENST00000639487	GCN1	Q92616	2671 aa	Known RBP	4.86	□□□□□ -1.63
RTTN-215	ENST00000639487	ATP5G2	Q06055	141 aa		4.86	□□□□□ -1.63
RTTN-215	ENST00000639487	TRPT1	Q86TN4	253 aa	Known RBP	4.86	□□□□□ -1.63
RTTN-215	ENST00000639487	BCL6B	Q8N143	479 aa	Predicted RBP	4.86	□□□□□ -1.63
RTTN-215	ENST00000639487	ZZEF1	O43149	2961 aa		4.86	□□□□□ -1.63
RTTN-215	ENST00000639487		A0A087WWC5	75 aa		4.86	□□□□□ -1.63
RTTN-215	ENST00000639487	SYNGR2	O43760	224 aa		4.86	□□□□□ -1.63
RTTN-215	ENST00000639487	GP9	P14770	177 aa		4.86	□□□□□ -1.63
RTTN-215	ENST00000639487	FOXA3	P55318	350 aa	Predicted RBP	4.86	□□□□□ -1.63
RTTN-215	ENST00000639487	KIAA2026	Q5HYC2	2103 aa		4.86	□□□□□ -1.63
RTTN-215	ENST00000639487	FOXI2	Q6ZQN5	318 aa		4.86	□□□□□ -1.63
RTTN-215	ENST00000639487	KLHDC1	Q8N7A1	406 aa		4.86	□□□□□ -1.63
RTTN-215	ENST00000639487	GVQW1	Q8N7I0	195 aa		4.86	□□□□□ -1.63
RTTN-215	ENST00000639487	ATP5S	Q99766	215 aa		4.86	□□□□□ -1.63
RTTN-215	ENST00000639487	ZMAT4	Q9H898	229 aa		4.86	□□□□□ -1.63
RTTN-215	ENST00000639487		A1L4Q6	167 aa		4.85	□□□□□ -1.63
RTTN-215	ENST00000639487	KLLN	B2CW77	178 aa		4.85	□□□□□ -1.63
RTTN-215	ENST00000639487		J3KT08	172 aa		4.85	□□□□□ -1.63
RTTN-215	ENST00000639487	IGKV1-16	P04430	117 aa		4.85	□□□□□ -1.63
RTTN-215	ENST00000639487	OTP	Q5XKR4	325 aa		4.85	□□□□□ -1.63
RTTN-215	ENST00000639487	RASL11A	Q6T310	242 aa		4.85	□□□□□ -1.63
RTTN-215	ENST00000639487	FAM19A3	Q7Z5A8	133 aa		4.85	□□□□□ -1.63
RTTN-215	ENST00000639487	STPG3	Q8N7X2	389 aa		4.85	□□□□□ -1.63
RTTN-215	ENST00000639487	GNPNAT1	Q96EK6	184 aa	Predicted RBP	4.85	□□□□□ -1.63
RTTN-215	ENST00000639487	TMEM101	Q96IK0	257 aa		4.85	□□□□□ -1.63
RTTN-215	ENST00000639487	SPANXA1	Q9NS26	97 aa		4.85	□□□□□ -1.63
RTTN-215	ENST00000639487	ZNF492	Q9P255	531 aa		4.85	□□□□□ -1.63
RTTN-215	ENST00000639487	TRAV9-1	A0A075B6T8	112 aa		4.85	□□□□□ -1.63
RTTN-215	ENST00000639487	LYNX1	G3V0Z9	82 aa		4.85	□□□□□ -1.63
RTTN-215	ENST00000639487	HSBP1	O75506	76 aa		4.85	□□□□□ -1.63
RTTN-215	ENST00000639487	LYNX1	P0DP58	116 aa		4.85	□□□□□ -1.63
RTTN-215	ENST00000639487	RPEL1	Q2QD12	228 aa		4.85	□□□□□ -1.63
RTTN-215	ENST00000639487	DEFB114	Q30KQ6	69 aa		4.85	□□□□□ -1.63
RTTN-215	ENST00000639487	TMEM97	Q5BJF2	176 aa		4.85	□□□□□ -1.63
RTTN-215	ENST00000639487	HAPLN4	Q86UW8	402 aa		4.85	□□□□□ -1.63
RTTN-215	ENST00000639487	FBXL15	Q9H469	300 aa		4.85	□□□□□ -1.63
RTTN-215	ENST00000639487	SCRT2	Q9NQ03	307 aa		4.85	□□□□□ -1.63
RTTN-215	ENST00000639487	PRO0628	Q9UI54	55 aa		4.85	□□□□□ -1.63
RTTN-215	ENST00000639487	IGHV3OR16-10	A0A075B7F0	116 aa		4.84	□□□□□ -1.63
RTTN-215	ENST00000639487		C9JAW5	83 aa		4.84	□□□□□ -1.63
RTTN-215	ENST00000639487	C3orf84	H3BNL1	204 aa		4.84	□□□□□ -1.63
RTTN-215	ENST00000639487	ISLR	O14498	428 aa		4.84	□□□□□ -1.63
RTTN-215	ENST00000639487	BUB3	O43684	328 aa		4.84	□□□□□ -1.63
RTTN-215	ENST00000639487	IGKV1-17	P01599	117 aa		4.84	□□□□□ -1.63
RTTN-215	ENST00000639487	REG1A	P05451	166 aa		4.84	□□□□□ -1.63
RTTN-215	ENST00000639487	SRI	P30626	198 aa		4.84	□□□□□ -1.63
RTTN-215	ENST00000639487	ZFAND6	Q6FIF0	208 aa		4.84	□□□□□ -1.63
RTTN-215	ENST00000639487	OR4C12	Q96R67	309 aa		4.84	□□□□□ -1.63
RTTN-215	ENST00000639487	IMMP2L	Q96T52	175 aa		4.84	□□□□□ -1.63
RTTN-215	ENST00000639487	HDHD3	Q9BSH5	251 aa	Predicted RBP	4.84	□□□□□ -1.63
RTTN-215	ENST00000639487	GNG12	Q9UBI6	72 aa		4.84	□□□□□ -1.63
RTTN-215	ENST00000639487	HIGD1A	Q9Y241	93 aa		4.84	□□□□□ -1.63
RTTN-215	ENST00000639487		K7EP34	96 aa		4.84	□□□□□ -1.63
RTTN-215	ENST00000639487		M0R1X1	148 aa		4.84	□□□□□ -1.63
RTTN-215	ENST00000639487	MT-ATP8	P03928	68 aa		4.84	□□□□□ -1.63
RTTN-215	ENST00000639487	FXYD3	Q14802	87 aa		4.84	□□□□□ -1.63
RTTN-215	ENST00000639487	HIST2H2BC	Q6DN03	193 aa		4.84	□□□□□ -1.63
RTTN-215	ENST00000639487	HIST2H2BD	Q6DRA6	164 aa		4.84	□□□□□ -1.63
RTTN-215	ENST00000639487	FAM231D	Q6ZW35	169 aa		4.84	□□□□□ -1.63
RTTN-215	ENST00000639487	WDR61	Q9GZS3	305 aa	Known RBP	4.84	□□□□□ -1.63
RTTN-215	ENST00000639487	DAZ1	Q9NQZ3	744 aa	Known RBP	4.84	□□□□□ -1.63
RTTN-215	ENST00000639487	TP73-AS1	Q9UF72	201 aa		4.84	□□□□□ -1.63
RTTN-215	ENST00000639487	RPL39P5	Q59GN2	51 aa		4.83	□□□□□ -1.64
RTTN-215	ENST00000639487	MEIG1	Q5JSS6	88 aa		4.83	□□□□□ -1.64
RTTN-215	ENST00000639487	FAM201A	Q5SY85	155 aa		4.83	□□□□□ -1.64
RTTN-215	ENST00000639487	DGAT2L7P	Q6IED9	249 aa		4.83	□□□□□ -1.64
RTTN-215	ENST00000639487	AMTN	Q6UX39	209 aa		4.83	□□□□□ -1.64
RTTN-215	ENST00000639487	LINC00336	Q6ZUF6	198 aa		4.83	□□□□□ -1.64
RTTN-215	ENST00000639487	OR51G1	Q8NGK1	321 aa		4.83	□□□□□ -1.64
RTTN-215	ENST00000639487	FAM167A-AS1	Q96KT0	104 aa		4.83	□□□□□ -1.64
RTTN-215	ENST00000639487	PLEKHA3	Q9HB20	300 aa		4.83	□□□□□ -1.64
RTTN-215	ENST00000639487	C2orf70	A6NJV1	201 aa		4.83	□□□□□ -1.64
RTTN-215	ENST00000639487	CHEK1	O14757	476 aa		4.83	□□□□□ -1.64
RTTN-215	ENST00000639487	SRP19	P09132	144 aa	Known RBP	4.83	□□□□□ -1.64
RTTN-215	ENST00000639487	MAL	P21145	153 aa		4.83	□□□□□ -1.64
RTTN-215	ENST00000639487	KLRD1	Q13241	179 aa		4.83	□□□□□ -1.64
RTTN-215	ENST00000639487	FAM159A	Q6UWV7	190 aa		4.83	□□□□□ -1.64
RTTN-215	ENST00000639487	HRCT1	Q6UXD1	115 aa		4.83	□□□□□ -1.64
RTTN-215	ENST00000639487	TVP23C	Q96ET8	276 aa		4.83	□□□□□ -1.64

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