RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 UBE2E2Q96LR5 201 aa9.65□□□□□ -0.86
SYNGAP1-207ENST00000628646 TMEM14CQ9P0S9 112 aa9.65□□□□□ -0.86
SYNGAP1-207ENST00000628646 HSBP1L1C9JCN9 74 aa9.65□□□□□ -0.86
SYNGAP1-207ENST00000628646 IGHG4P01861 327 aa9.65□□□□□ -0.86
SYNGAP1-207ENST00000628646 IGLC1P0CG04 106 aa9.65□□□□□ -0.86
SYNGAP1-207ENST00000628646 RAB4AP20338 218 aa9.65□□□□□ -0.86
SYNGAP1-207ENST00000628646 HOXD3P31249 432 aaPredicted RBP9.65□□□□□ -0.86
SYNGAP1-207ENST00000628646 ID1P41134 155 aa9.65□□□□□ -0.86
SYNGAP1-207ENST00000628646 SHANK2-AS3Q9BTD1 123 aa9.65□□□□□ -0.86
SYNGAP1-207ENST00000628646 CRYGCP07315 174 aa9.65□□□□□ -0.86
SYNGAP1-207ENST00000628646 AMTP48728 403 aa9.65□□□□□ -0.86
SYNGAP1-207ENST00000628646 SLURP1P55000 103 aa9.65□□□□□ -0.86
SYNGAP1-207ENST00000628646 PLP1P60201 277 aa9.65□□□□□ -0.86
SYNGAP1-207ENST00000628646 RPP21Q9H633 154 aaKnown RBP9.65□□□□□ -0.86
SYNGAP1-207ENST00000628646 CBLN1P23435 193 aa9.65□□□□□ -0.87
SYNGAP1-207ENST00000628646 RASL11AQ6T310 242 aa9.65□□□□□ -0.87
SYNGAP1-207ENST00000628646 RNASE7Q9H1E1 156 aaKnown RBP9.65□□□□□ -0.87
SYNGAP1-207ENST00000628646 K7EIM0 57 aa9.64□□□□□ -0.87
SYNGAP1-207ENST00000628646 TCRAP04437 139 aa9.64□□□□□ -0.87
SYNGAP1-207ENST00000628646 FANCD2OSQ96PS1 177 aa9.64□□□□□ -0.87
SYNGAP1-207ENST00000628646 DAZ1Q9NQZ3 744 aaKnown RBP9.64□□□□□ -0.87
SYNGAP1-207ENST00000628646 MYCNOSP40205 109 aa9.64□□□□□ -0.87
SYNGAP1-207ENST00000628646 PDE6HQ13956 83 aa9.64□□□□□ -0.87
SYNGAP1-207ENST00000628646 Q6AWC8 147 aa9.64□□□□□ -0.87
SYNGAP1-207ENST00000628646 TMEM189A5PLL7 270 aa9.63□□□□□ -0.87
SYNGAP1-207ENST00000628646 TM4SF20Q53R12 229 aa9.63□□□□□ -0.87
SYNGAP1-207ENST00000628646 TOMM20LQ6UXN7 152 aa9.63□□□□□ -0.87
SYNGAP1-207ENST00000628646 FBN2P35556 2912 aa9.63□□□□□ -0.87
SYNGAP1-207ENST00000628646 GNG5P63218 68 aa9.63□□□□□ -0.87
SYNGAP1-207ENST00000628646 SLC50A1Q9BRV3 221 aa9.63□□□□□ -0.87
SYNGAP1-207ENST00000628646 RHPN1-AS1Q9BWJ2 59 aa9.63□□□□□ -0.87
SYNGAP1-207ENST00000628646 IGHV4OR15-8A0A075B7B6 117 aa9.63□□□□□ -0.87
SYNGAP1-207ENST00000628646 A0A087WW49 117 aa9.63□□□□□ -0.87
SYNGAP1-207ENST00000628646 J3KRW8 73 aa9.63□□□□□ -0.87
SYNGAP1-207ENST00000628646 ADMP35318 185 aa9.63□□□□□ -0.87
SYNGAP1-207ENST00000628646 TMEM256Q8N2U0 113 aa9.63□□□□□ -0.87
SYNGAP1-207ENST00000628646 TSKUQ8WUA8 353 aa9.63□□□□□ -0.87
SYNGAP1-207ENST00000628646 A0A1B0GW15 77 aa9.62□□□□□ -0.87
SYNGAP1-207ENST00000628646 TCF24Q7RTU0 167 aa9.62□□□□□ -0.87
SYNGAP1-207ENST00000628646 ATP5L2Q7Z4Y8 100 aa9.62□□□□□ -0.87
SYNGAP1-207ENST00000628646 ZNF738Q8NE65 137 aa9.62□□□□□ -0.87
SYNGAP1-207ENST00000628646 PMCHP20382 165 aa9.62□□□□□ -0.87
SYNGAP1-207ENST00000628646 KRTDAPP60985 99 aa9.62□□□□□ -0.87
SYNGAP1-207ENST00000628646 HBBP68871 147 aa9.62□□□□□ -0.87
SYNGAP1-207ENST00000628646 TMEM78Q5T7P6 136 aa9.62□□□□□ -0.87
SYNGAP1-207ENST00000628646 FAM231DQ6ZW35 169 aa9.62□□□□□ -0.87
SYNGAP1-207ENST00000628646 FXYD5Q96DB9 178 aa9.62□□□□□ -0.87
SYNGAP1-207ENST00000628646 SGK494Q96LW2 274 aa9.62□□□□□ -0.87
SYNGAP1-207ENST00000628646 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.62□□□□□ -0.87
SYNGAP1-207ENST00000628646 TRBV12-3P01733 135 aa9.62□□□□□ -0.87
SYNGAP1-207ENST00000628646 TMEM208Q9BTX3 173 aa9.62□□□□□ -0.87
SYNGAP1-207ENST00000628646 STAB1Q9NY15 2570 aa9.62□□□□□ -0.87
SYNGAP1-207ENST00000628646 I3L2K1 104 aa9.62□□□□□ -0.87
SYNGAP1-207ENST00000628646 IGKV3-20P01619 116 aa9.62□□□□□ -0.87
SYNGAP1-207ENST00000628646 ZNF491Q8N8L2 437 aa9.62□□□□□ -0.87
SYNGAP1-207ENST00000628646 NUDT10Q8NFP7 164 aa9.62□□□□□ -0.87
SYNGAP1-207ENST00000628646 ZNF502Q8TBZ5 544 aa9.62□□□□□ -0.87
SYNGAP1-207ENST00000628646 NUDT11Q96G61 164 aa9.62□□□□□ -0.87
SYNGAP1-207ENST00000628646 PSG8Q9UQ74 426 aa9.62□□□□□ -0.87
SYNGAP1-207ENST00000628646 NDUFA7O95182 113 aa9.61□□□□□ -0.87
SYNGAP1-207ENST00000628646 PKIAP61925 76 aa9.61□□□□□ -0.87
SYNGAP1-207ENST00000628646 SNRPD3P62318 126 aaKnown RBP9.61□□□□□ -0.87
SYNGAP1-207ENST00000628646 TCTEX1D4Q5JR98 221 aa9.61□□□□□ -0.87
SYNGAP1-207ENST00000628646 FA2HQ7L5A8 372 aa9.61□□□□□ -0.87
SYNGAP1-207ENST00000628646 TMEM89A2RUT3 159 aa9.61□□□□□ -0.87
SYNGAP1-207ENST00000628646 ASPHD1Q5U4P2 390 aa9.61□□□□□ -0.87
SYNGAP1-207ENST00000628646 EBLN2Q6P2I7 272 aa9.61□□□□□ -0.87
SYNGAP1-207ENST00000628646 RNASEKQ6P5S7 137 aaKnown RBP9.61□□□□□ -0.87
SYNGAP1-207ENST00000628646 LURAP1LQ8IV03 231 aa9.61□□□□□ -0.87
SYNGAP1-207ENST00000628646 ORM1P02763 201 aa9.6□□□□□ -0.87
SYNGAP1-207ENST00000628646 ESDP10768 282 aa9.6□□□□□ -0.87
SYNGAP1-207ENST00000628646 SHISA2Q6UWI4 295 aa9.6□□□□□ -0.87
SYNGAP1-207ENST00000628646 PGLYRP4Q96LB8 373 aa9.6□□□□□ -0.87
SYNGAP1-207ENST00000628646 LINC00479Q96M42 142 aa9.6□□□□□ -0.87
SYNGAP1-207ENST00000628646 SRIP30626 198 aa9.6□□□□□ -0.87
SYNGAP1-207ENST00000628646 C14orf144Q96I85 54 aa9.6□□□□□ -0.87
SYNGAP1-207ENST00000628646 ZNF492Q9P255 531 aa9.6□□□□□ -0.87
SYNGAP1-207ENST00000628646 NDUFA4O00483 81 aa9.6□□□□□ -0.87
SYNGAP1-207ENST00000628646 ARL6IP6Q8N6S5 226 aa9.6□□□□□ -0.87
SYNGAP1-207ENST00000628646 HIGD1CA8MV81 97 aa9.59□□□□□ -0.87
SYNGAP1-207ENST00000628646 EGR2P11161 476 aaPredicted RBP9.59□□□□□ -0.87
SYNGAP1-207ENST00000628646 ZNF664Q8N3J9 261 aa9.59□□□□□ -0.87
SYNGAP1-207ENST00000628646 H3BRN7 92 aa9.59□□□□□ -0.87
SYNGAP1-207ENST00000628646 PRB4P10163 310 aaPredicted RBP9.59□□□□□ -0.87
SYNGAP1-207ENST00000628646 PRSS3P2Q8NHM4 247 aa9.59□□□□□ -0.87
SYNGAP1-207ENST00000628646 VAMP8Q9BV40 100 aa9.59□□□□□ -0.87
SYNGAP1-207ENST00000628646 A0A1B0GV90 55 aa9.59□□□□□ -0.87
SYNGAP1-207ENST00000628646 CT83Q5H943 113 aa9.59□□□□□ -0.87
SYNGAP1-207ENST00000628646 SAMD13Q5VXD3 122 aa9.59□□□□□ -0.87
SYNGAP1-207ENST00000628646 C4orf3Q8WVX3 66 aa9.59□□□□□ -0.87
SYNGAP1-207ENST00000628646 A0A1B0GUT8 65 aa9.59□□□□□ -0.87
SYNGAP1-207ENST00000628646 CTSGP08311 255 aa9.59□□□□□ -0.87
SYNGAP1-207ENST00000628646 HTN1P15515 57 aa9.59□□□□□ -0.87
SYNGAP1-207ENST00000628646 SIGLEC15Q6ZMC9 328 aa9.59□□□□□ -0.87
SYNGAP1-207ENST00000628646 C18orf65Q6ZTR6 163 aa9.59□□□□□ -0.87
SYNGAP1-207ENST00000628646 NDUFA11Q86Y39 141 aa9.59□□□□□ -0.87
SYNGAP1-207ENST00000628646 TRBV19A0A075B6N1 114 aa9.58□□□□□ -0.88
SYNGAP1-207ENST00000628646 SMIM27A0A1W2PRY6 76 aa9.58□□□□□ -0.88
SYNGAP1-207ENST00000628646 FAM231BA6NCW3 169 aa9.58□□□□□ -0.88
SYNGAP1-207ENST00000628646 OR4C46A6NHA9 309 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms