RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 LINC00336Q6ZUF6 198 aa5.73□□□□□ -1.49
CLK1-215ENST00000621181 OR10W1Q8NGF6 305 aa5.73□□□□□ -1.49
CLK1-215ENST00000621181 RNF2Q99496 336 aa5.73□□□□□ -1.49
CLK1-215ENST00000621181 SRSF8Q9BRL6 282 aaKnown RBP5.73□□□□□ -1.49
CLK1-215ENST00000621181 SEPSECSQ9HD40 501 aaKnown RBP5.73□□□□□ -1.49
CLK1-215ENST00000621181 C21orf62Q9NYP8 219 aa5.73□□□□□ -1.49
CLK1-215ENST00000621181 HECTD4Q9Y4D8 3996 aa5.73□□□□□ -1.49
CLK1-215ENST00000621181 IGHV3-21A0A0B4J1V1 117 aa5.72□□□□□ -1.49
CLK1-215ENST00000621181 SCO2A0A1W2PP80 73 aa5.72□□□□□ -1.49
CLK1-215ENST00000621181 A0A1W2PPQ1 181 aa5.72□□□□□ -1.49
CLK1-215ENST00000621181 A0A1W2PPV4 95 aa5.72□□□□□ -1.49
CLK1-215ENST00000621181 PGPEP1LA6NFU8 196 aa5.72□□□□□ -1.49
CLK1-215ENST00000621181 UPK2O00526 184 aa5.72□□□□□ -1.49
CLK1-215ENST00000621181 CA1P00915 261 aaPredicted RBP5.72□□□□□ -1.49
CLK1-215ENST00000621181 NPY1RP25929 384 aa5.72□□□□□ -1.49
CLK1-215ENST00000621181 CMC4P56277 68 aaPredicted RBP5.72□□□□□ -1.49
CLK1-215ENST00000621181 YPEL3P61236 119 aaPredicted RBP5.72□□□□□ -1.49
CLK1-215ENST00000621181 PKIAP61925 76 aa5.72□□□□□ -1.49
CLK1-215ENST00000621181 Q56UQ5 140 aa5.72□□□□□ -1.49
CLK1-215ENST00000621181 SLC24A4Q8NFF2 622 aa5.72□□□□□ -1.49
CLK1-215ENST00000621181 OCC1Q8TAD7 63 aa5.72□□□□□ -1.49
CLK1-215ENST00000621181 ZNF503Q96F45 646 aa5.72□□□□□ -1.49
CLK1-215ENST00000621181 SFRP2Q96HF1 295 aa5.72□□□□□ -1.49
CLK1-215ENST00000621181 C14orf144Q96I85 54 aa5.72□□□□□ -1.49
CLK1-215ENST00000621181 PFDN5Q99471 154 aa5.72□□□□□ -1.49
CLK1-215ENST00000621181 CHRDL1Q9BU40 450 aa5.72□□□□□ -1.49
CLK1-215ENST00000621181 FUT9Q9Y231 359 aa5.72□□□□□ -1.49
CLK1-215ENST00000621181 LY96Q9Y6Y9 160 aa5.72□□□□□ -1.49
CLK1-215ENST00000621181 ARL2-SNX15V9GYD0 113 aa5.72□□□□□ -1.49
CLK1-215ENST00000621181 IGKV1OR2-108A0A075B7D4 117 aa5.71□□□□□ -1.49
CLK1-215ENST00000621181 IGHV3-49A0A0A0MS15 119 aa5.71□□□□□ -1.49
CLK1-215ENST00000621181 C9JCJ5 164 aa5.71□□□□□ -1.49
CLK1-215ENST00000621181 F8W735 103 aaPredicted RBP5.71□□□□□ -1.49
CLK1-215ENST00000621181 K7EMT4 169 aa5.71□□□□□ -1.49
CLK1-215ENST00000621181 K7EN84 100 aa5.71□□□□□ -1.49
CLK1-215ENST00000621181 RD3LP0DJH9 198 aa5.71□□□□□ -1.49
CLK1-215ENST00000621181 ATP5IP56385 69 aaPredicted RBP5.71□□□□□ -1.49
CLK1-215ENST00000621181 PRCDQ00LT1 54 aa5.71□□□□□ -1.49
CLK1-215ENST00000621181 FAM78BQ5VT40 261 aa5.71□□□□□ -1.49
CLK1-215ENST00000621181 CST9LP1Q5W188 147 aa5.71□□□□□ -1.49
CLK1-215ENST00000621181 TEPPQ6URK8 271 aa5.71□□□□□ -1.49
CLK1-215ENST00000621181 GBGT1Q8N5D6 347 aa5.71□□□□□ -1.49
CLK1-215ENST00000621181 TMEM37Q8WXS4 190 aa5.71□□□□□ -1.49
CLK1-215ENST00000621181 RHPN1-AS1Q9BWJ2 59 aa5.71□□□□□ -1.49
CLK1-215ENST00000621181 HINT2Q9BX68 163 aa5.71□□□□□ -1.49
CLK1-215ENST00000621181 SMPXQ9UHP9 88 aa5.71□□□□□ -1.49
CLK1-215ENST00000621181 PRNDQ9UKY0 176 aa5.71□□□□□ -1.49
CLK1-215ENST00000621181 APLNQ9ULZ1 77 aa5.71□□□□□ -1.49
CLK1-215ENST00000621181 KIAA1109Q2LD37 5005 aa5.71□□□□□ -1.5
CLK1-215ENST00000621181 TRAV9-1A0A075B6T8 112 aa5.71□□□□□ -1.5
CLK1-215ENST00000621181 LOC100996750A0A140TA64 210 aa5.71□□□□□ -1.5
CLK1-215ENST00000621181 TEX50A0A1B0GTY4 177 aa5.71□□□□□ -1.5
CLK1-215ENST00000621181 INS-IGF2F8WCM5 200 aa5.71□□□□□ -1.5
CLK1-215ENST00000621181 CHEK1O14757 476 aa5.71□□□□□ -1.5
CLK1-215ENST00000621181 GCGP01275 180 aa5.71□□□□□ -1.5
CLK1-215ENST00000621181 SELENOTP62341 195 aa5.71□□□□□ -1.5
CLK1-215ENST00000621181 RHOBP62745 196 aa5.71□□□□□ -1.5
CLK1-215ENST00000621181 PAFAH1B2P68402 229 aa5.71□□□□□ -1.5
CLK1-215ENST00000621181 RELQ04864 619 aaPredicted RBP5.71□□□□□ -1.5
CLK1-215ENST00000621181 WT1-ASQ06250 92 aa5.71□□□□□ -1.5
CLK1-215ENST00000621181 C2orf83Q53S99 150 aa5.71□□□□□ -1.5
CLK1-215ENST00000621181 KCNIP4Q6PIL6 250 aa5.71□□□□□ -1.5
CLK1-215ENST00000621181 LINC00469Q8N7U9 141 aa5.71□□□□□ -1.5
CLK1-215ENST00000621181 TMEM116Q8NCL8 245 aa5.71□□□□□ -1.5
CLK1-215ENST00000621181 BTF3L4Q96K17 158 aa5.71□□□□□ -1.5
CLK1-215ENST00000621181 ATP6V0BQ99437 205 aa5.71□□□□□ -1.5
CLK1-215ENST00000621181 KRTAP4-6Q9BYQ5 205 aa5.71□□□□□ -1.5
CLK1-215ENST00000621181 OR51B2Q9Y5P1 312 aa5.71□□□□□ -1.5
CLK1-215ENST00000621181 IGHV3OR16-13A0A075B7E8 117 aa5.7□□□□□ -1.5
CLK1-215ENST00000621181 IGHV3-74A0A0B4J1X5 117 aa5.7□□□□□ -1.5
CLK1-215ENST00000621181 IGHV7-4-1A0A0J9YVY3 117 aa5.7□□□□□ -1.5
CLK1-215ENST00000621181 RNASE2P10153 161 aaKnown RBP5.7□□□□□ -1.5
CLK1-215ENST00000621181 DDTP30046 118 aa5.7□□□□□ -1.5
CLK1-215ENST00000621181 LINC00310P59036 64 aa5.7□□□□□ -1.5
CLK1-215ENST00000621181 MIR17HGQ75NE6 70 aa5.7□□□□□ -1.5
CLK1-215ENST00000621181 OR10G8Q8NGN5 311 aa5.7□□□□□ -1.5
CLK1-215ENST00000621181 OR1L8Q8NGR8 309 aa5.7□□□□□ -1.5
CLK1-215ENST00000621181 MRPL18Q9H0U6 180 aaKnown RBP5.7□□□□□ -1.5
CLK1-215ENST00000621181 TP53TG3Q9ULZ0 132 aa5.7□□□□□ -1.5
CLK1-215ENST00000621181 F11RQ9Y624 299 aaKnown RBP5.7□□□□□ -1.5
CLK1-215ENST00000621181 IGHV4-4A0A075B6R2 117 aa5.69□□□□□ -1.5
CLK1-215ENST00000621181 K7EIM0 57 aa5.69□□□□□ -1.5
CLK1-215ENST00000621181 NUPR1O60356 82 aa5.69□□□□□ -1.5
CLK1-215ENST00000621181 OR5G3P0C626 314 aa5.69□□□□□ -1.5
CLK1-215ENST00000621181 OR10J4P0C629 311 aa5.69□□□□□ -1.5
CLK1-215ENST00000621181 ESDP10768 282 aa5.69□□□□□ -1.5
CLK1-215ENST00000621181 CNN1P51911 297 aaKnown RBP5.69□□□□□ -1.5
CLK1-215ENST00000621181 RAB4BP61018 213 aa5.69□□□□□ -1.5
CLK1-215ENST00000621181 RPL11P62913 178 aaKnown RBP5.69□□□□□ -1.5
CLK1-215ENST00000621181 LEMD1Q68G75 181 aa5.69□□□□□ -1.5
CLK1-215ENST00000621181 ZNF664Q8N3J9 261 aa5.69□□□□□ -1.5
CLK1-215ENST00000621181 SLC35E1Q96K37 410 aa5.69□□□□□ -1.5
CLK1-215ENST00000621181 FAM167A-AS1Q96KT0 104 aa5.69□□□□□ -1.5
CLK1-215ENST00000621181 NDUFA4L2Q9NRX3 87 aa5.69□□□□□ -1.5
CLK1-215ENST00000621181 IL36BQ9NZH7 164 aa5.69□□□□□ -1.5
CLK1-215ENST00000621181 PRSS29PA6NIE9 313 aa5.69□□□□□ -1.5
CLK1-215ENST00000621181 IGLV2-8P01709 118 aa5.69□□□□□ -1.5
CLK1-215ENST00000621181 CTSGP08311 255 aa5.69□□□□□ -1.5
CLK1-215ENST00000621181 HLA-DMBP28068 263 aa5.69□□□□□ -1.5
CLK1-215ENST00000621181 RAB31Q13636 194 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms