RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	EXOC3-AS1	Q8N2X6	119 aa		10.41	□□□□□ -0.74
SREBF1-222	ENST00000583732	EIF4E3	Q8N5X7	224 aa	Known RBP	10.41	□□□□□ -0.74
SREBF1-222	ENST00000583732	MRPL53	Q96EL3	112 aa	Known RBP	10.41	□□□□□ -0.74
SREBF1-222	ENST00000583732	KLF12	Q9Y4X4	402 aa		10.41	□□□□□ -0.74
SREBF1-222	ENST00000583732	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	10.4	□□□□□ -0.74
SREBF1-222	ENST00000583732	KLLN	B2CW77	178 aa		10.4	□□□□□ -0.74
SREBF1-222	ENST00000583732	PLA2G10	O15496	165 aa		10.4	□□□□□ -0.74
SREBF1-222	ENST00000583732	LYRM1	O43325	122 aa		10.4	□□□□□ -0.74
SREBF1-222	ENST00000583732	NDUFB4	O95168	129 aa		10.4	□□□□□ -0.74
SREBF1-222	ENST00000583732	IGKV2D-40	P01614	121 aa	Predicted RBP	10.4	□□□□□ -0.74
SREBF1-222	ENST00000583732	BTF3	P20290	206 aa	Known RBP	10.4	□□□□□ -0.74
SREBF1-222	ENST00000583732	RPL29	P47914	159 aa	Known RBP	10.4	□□□□□ -0.74
SREBF1-222	ENST00000583732	CNPY1	Q3B7I2	92 aa		10.4	□□□□□ -0.74
SREBF1-222	ENST00000583732	C12orf45	Q8N5I9	185 aa	Predicted RBP	10.4	□□□□□ -0.74
SREBF1-222	ENST00000583732	C2orf50	Q96LR7	162 aa		10.4	□□□□□ -0.74
SREBF1-222	ENST00000583732	AGPAT4-IT1	Q9H0P7	198 aa		10.4	□□□□□ -0.74
SREBF1-222	ENST00000583732	MRPL16	Q9NX20	251 aa	Known RBP	10.4	□□□□□ -0.74
SREBF1-222	ENST00000583732	SIVA1	O15304	175 aa		10.39	□□□□□ -0.75
SREBF1-222	ENST00000583732	MPDU1	O75352	247 aa		10.39	□□□□□ -0.75
SREBF1-222	ENST00000583732	ZNF324	O75467	553 aa	Predicted RBP	10.39	□□□□□ -0.75
SREBF1-222	ENST00000583732	GPX1	P07203	203 aa		10.39	□□□□□ -0.75
SREBF1-222	ENST00000583732	SULT1A1	P50225	295 aa		10.39	□□□□□ -0.75
SREBF1-222	ENST00000583732	RAB32	Q13637	225 aa		10.39	□□□□□ -0.75
SREBF1-222	ENST00000583732	VWC2	Q2TAL6	325 aa		10.39	□□□□□ -0.75
SREBF1-222	ENST00000583732	GCSAML	Q5JQS6	135 aa		10.39	□□□□□ -0.75
SREBF1-222	ENST00000583732	PRR9	Q5T870	116 aa		10.39	□□□□□ -0.75
SREBF1-222	ENST00000583732	FAM122C	Q6P4D5	195 aa		10.39	□□□□□ -0.75
SREBF1-222	ENST00000583732		Q6ZQT7	251 aa		10.39	□□□□□ -0.75
SREBF1-222	ENST00000583732	STX12	Q86Y82	276 aa		10.39	□□□□□ -0.75
SREBF1-222	ENST00000583732	GPN1	Q9HCN4	374 aa	Predicted RBP	10.39	□□□□□ -0.75
SREBF1-222	ENST00000583732	LYRM2	Q9NU23	88 aa	Predicted RBP	10.39	□□□□□ -0.75
SREBF1-222	ENST00000583732	NUDT15	Q9NV35	164 aa		10.39	□□□□□ -0.75
SREBF1-222	ENST00000583732	TMEM14C	Q9P0S9	112 aa		10.39	□□□□□ -0.75
SREBF1-222	ENST00000583732	TP53TG3	Q9ULZ0	132 aa		10.39	□□□□□ -0.75
SREBF1-222	ENST00000583732	PRELID1	Q9Y255	219 aa		10.39	□□□□□ -0.75
SREBF1-222	ENST00000583732	ICOS	Q9Y6W8	199 aa		10.39	□□□□□ -0.75
SREBF1-222	ENST00000583732	RGS13	O14921	159 aa		10.38	□□□□□ -0.75
SREBF1-222	ENST00000583732	PAX4	O43316	350 aa		10.38	□□□□□ -0.75
SREBF1-222	ENST00000583732	SPINK4	O60575	86 aa		10.38	□□□□□ -0.75
SREBF1-222	ENST00000583732	NXPH4	O95158	308 aa		10.38	□□□□□ -0.75
SREBF1-222	ENST00000583732	TCRB	P04435	133 aa		10.38	□□□□□ -0.75
SREBF1-222	ENST00000583732	HIST1H1E	P10412	219 aa	Known RBP	10.38	□□□□□ -0.75
SREBF1-222	ENST00000583732	S100A11	P31949	105 aa		10.38	□□□□□ -0.75
SREBF1-222	ENST00000583732	TCL1A	P56279	114 aa		10.38	□□□□□ -0.75
SREBF1-222	ENST00000583732	ICAM4	Q14773	271 aa		10.38	□□□□□ -0.75
SREBF1-222	ENST00000583732	ANXA2R	Q3ZCQ2	193 aa		10.38	□□□□□ -0.75
SREBF1-222	ENST00000583732	TMEM252	Q8N6L7	170 aa		10.38	□□□□□ -0.75
SREBF1-222	ENST00000583732	FAM19A4	Q96LR4	140 aa		10.38	□□□□□ -0.75
SREBF1-222	ENST00000583732	LINC00477	Q96M19	166 aa		10.38	□□□□□ -0.75
SREBF1-222	ENST00000583732	AAMDC	Q9H7C9	122 aa		10.38	□□□□□ -0.75
SREBF1-222	ENST00000583732	HBG1	P69891	147 aa		10.37	□□□□□ -0.75
SREBF1-222	ENST00000583732	HBG2	P69892	147 aa		10.37	□□□□□ -0.75
SREBF1-222	ENST00000583732	TMEM78	Q5T7P6	136 aa		10.37	□□□□□ -0.75
SREBF1-222	ENST00000583732		Q6ZRN7	208 aa	Predicted RBP	10.37	□□□□□ -0.75
SREBF1-222	ENST00000583732	C18orf15	Q96N68	181 aa		10.37	□□□□□ -0.75
SREBF1-222	ENST00000583732	VGLL1	Q99990	258 aa		10.37	□□□□□ -0.75
SREBF1-222	ENST00000583732	ARPC5L	Q9BPX5	153 aa		10.37	□□□□□ -0.75
SREBF1-222	ENST00000583732	LINC00467	Q9BRT7	94 aa		10.37	□□□□□ -0.75
SREBF1-222	ENST00000583732	SLC25A2	Q9BXI2	301 aa		10.37	□□□□□ -0.75
SREBF1-222	ENST00000583732	TNFRSF18	Q9Y5U5	241 aa		10.37	□□□□□ -0.75
SREBF1-222	ENST00000583732	PDE6H	Q13956	83 aa		10.36	□□□□□ -0.75
SREBF1-222	ENST00000583732	MIR17HG	Q75NE6	70 aa		10.36	□□□□□ -0.75
SREBF1-222	ENST00000583732		Q8TAT8	98 aa		10.36	□□□□□ -0.75
SREBF1-222	ENST00000583732	ST6GAL2	Q96JF0	529 aa		10.36	□□□□□ -0.75
SREBF1-222	ENST00000583732	C8orf49	Q96NF6	230 aa		10.36	□□□□□ -0.75
SREBF1-222	ENST00000583732	NPCDR1	Q9BY65	106 aa		10.36	□□□□□ -0.75
SREBF1-222	ENST00000583732	IGHV1OR15-1	A0A075B7D0	117 aa		10.35	□□□□□ -0.75
SREBF1-222	ENST00000583732	H2AFB2	P0C5Z0	115 aa		10.35	□□□□□ -0.75
SREBF1-222	ENST00000583732	CRISP2	P16562	243 aa		10.35	□□□□□ -0.75
SREBF1-222	ENST00000583732	ERVFC1-1	P60608	527 aa		10.35	□□□□□ -0.75
SREBF1-222	ENST00000583732	ATP6V1F	Q16864	119 aa		10.35	□□□□□ -0.75
SREBF1-222	ENST00000583732	IBA57	Q5T440	356 aa	Known RBP	10.35	□□□□□ -0.75
SREBF1-222	ENST00000583732	C9orf47	Q6ZRZ4	202 aa		10.35	□□□□□ -0.75
SREBF1-222	ENST00000583732	ZFAND2A	Q8N6M9	145 aa		10.35	□□□□□ -0.75
SREBF1-222	ENST00000583732	THAP6	Q8TBB0	222 aa		10.35	□□□□□ -0.75
SREBF1-222	ENST00000583732	EREG	O14944	169 aa		10.34	□□□□□ -0.75
SREBF1-222	ENST00000583732	DNAH10OS	P0CZ25	163 aa		10.34	□□□□□ -0.75
SREBF1-222	ENST00000583732	ZNF415	Q09FC8	603 aa		10.34	□□□□□ -0.75
SREBF1-222	ENST00000583732	MUC21	Q5SSG8	566 aa		10.34	□□□□□ -0.75
SREBF1-222	ENST00000583732	PRO0255	Q9UI72	69 aa		10.34	□□□□□ -0.75
SREBF1-222	ENST00000583732	EPM2A	B3EWF7	344 aa		10.33	□□□□□ -0.76
SREBF1-222	ENST00000583732	PRAF2	O60831	178 aa		10.33	□□□□□ -0.76
SREBF1-222	ENST00000583732	OR10J4	P0C629	311 aa		10.33	□□□□□ -0.76
SREBF1-222	ENST00000583732	CRYBA4	P53673	196 aa		10.33	□□□□□ -0.76
SREBF1-222	ENST00000583732	NHLH2	Q02577	135 aa		10.33	□□□□□ -0.76
SREBF1-222	ENST00000583732	CHAC2	Q8WUX2	184 aa		10.33	□□□□□ -0.76
SREBF1-222	ENST00000583732	PHYHIPL	Q96FC7	376 aa		10.33	□□□□□ -0.76
SREBF1-222	ENST00000583732	FAM167A-AS1	Q96KT0	104 aa		10.33	□□□□□ -0.76
SREBF1-222	ENST00000583732	ZNF492	Q9P255	531 aa		10.33	□□□□□ -0.76
SREBF1-222	ENST00000583732	HHLA3	Q9XRX5	114 aa		10.33	□□□□□ -0.76
SREBF1-222	ENST00000583732		E5RGE8	158 aa		10.32	□□□□□ -0.76
SREBF1-222	ENST00000583732	NBEAP1	P0C6P0	100 aa		10.32	□□□□□ -0.76
SREBF1-222	ENST00000583732	ZNF138	P52744	262 aa		10.32	□□□□□ -0.76
SREBF1-222	ENST00000583732	IL15RA	Q13261	267 aa		10.32	□□□□□ -0.76
SREBF1-222	ENST00000583732	FHL2	Q14192	279 aa		10.32	□□□□□ -0.76
SREBF1-222	ENST00000583732	LYPD5	Q6UWN5	251 aa		10.32	□□□□□ -0.76
SREBF1-222	ENST00000583732	OR5C1	Q8NGR4	320 aa		10.32	□□□□□ -0.76
SREBF1-222	ENST00000583732	PAXX	Q9BUH6	204 aa		10.32	□□□□□ -0.76
SREBF1-222	ENST00000583732	OR51M1	Q9H341	326 aa		10.32	□□□□□ -0.76
SREBF1-222	ENST00000583732	PTTG2	Q9NZH5	202 aa		10.32	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms